RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 PCDHA13Q9Y5I0 950 aa15.98■□□□□ 0.15
CCDC43-203ENST00000588210 DHX15O43143 795 aaKnown RBP15.97■□□□□ 0.15
CCDC43-203ENST00000588210 ATN1P54259 1190 aaPredicted RBP15.97■□□□□ 0.15
CCDC43-203ENST00000588210 SNX17Q15036 470 aa15.97■□□□□ 0.15
CCDC43-203ENST00000588210 SNX29Q8TEQ0 813 aa15.97■□□□□ 0.15
CCDC43-203ENST00000588210 COG1Q8WTW3 980 aa15.97■□□□□ 0.15
CCDC43-203ENST00000588210 SEPT1Q8WYJ6 367 aa15.97■□□□□ 0.15
CCDC43-203ENST00000588210 CAPN6Q9Y6Q1 641 aa15.97■□□□□ 0.15
CCDC43-203ENST00000588210 DOCK5Q9H7D0 1870 aa15.97■□□□□ 0.15
CCDC43-203ENST00000588210 A0A0U1RQG5 324 aaPredicted RBP15.96■□□□□ 0.15
CCDC43-203ENST00000588210 POTEMA6NI47 508 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 ZNF185O15231 689 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 PJA2O43164 708 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 RAD51AP2Q09MP3 1159 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 KRT79Q5XKE5 535 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 MMGT1Q8N4V1 131 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 BAP1Q92560 729 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 RIT2Q99578 217 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 TSG101Q99816 390 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 FAM207AQ9NSI2 230 aaPredicted RBP15.96■□□□□ 0.15
CCDC43-203ENST00000588210 EIF4A3P38919 411 aaKnown RBP15.96■□□□□ 0.15
CCDC43-203ENST00000588210 TNNT3P45378 269 aaPredicted RBP15.96■□□□□ 0.15
CCDC43-203ENST00000588210 SP4Q02446 784 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 LRRC26Q2I0M4 334 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 CCDC70Q6NSX1 233 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 LEKR1Q6ZMV7 388 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 DYMQ7RTS9 669 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 CREG2Q8IUH2 290 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 SLC5A5Q92911 643 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 KATNAL1Q9BW62 490 aa15.96■□□□□ 0.15
CCDC43-203ENST00000588210 LRRC53A6NM62 1247 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 TBX3O15119 743 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 SYF2O95926 243 aaKnown RBP15.95■□□□□ 0.14
CCDC43-203ENST00000588210 C2orf54Q08AI8 447 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 ITGA7Q13683 1181 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 PDXDC1Q6P996 788 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 CCNI2Q6ZMN8 369 aaPredicted RBP15.95■□□□□ 0.14
CCDC43-203ENST00000588210 ETNPPLQ8TBG4 499 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 DDX12PQ92771 950 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 FAM20AQ96MK3 541 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 ALS2CR12Q96Q35 445 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 DEF6Q9H4E7 631 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 MMRN2Q9H8L6 949 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 KCNMB3Q9NPA1 279 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 TCEAL9Q9UHQ7 104 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 GSTTP1A0A1W2PQM5 241 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 ARVCFO00192 962 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 PRPF6O94906 941 aaKnown RBP15.95■□□□□ 0.14
CCDC43-203ENST00000588210 ATG7O95352 703 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 F2P00734 622 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 LGALS2P05162 132 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 IVLP07476 585 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 TCP1P17987 556 aaKnown RBP15.95■□□□□ 0.14
CCDC43-203ENST00000588210 TCF7P36402 384 aaPredicted RBP15.95■□□□□ 0.14
CCDC43-203ENST00000588210 CDK7P50613 346 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 ACTR2P61160 394 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 KRT76Q01546 638 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 MAPK8IP2Q13387 824 aaPredicted RBP15.95■□□□□ 0.14
CCDC43-203ENST00000588210 ZCWPW2Q504Y3 356 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 KCNK18Q7Z418 384 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 SLC43A3Q8NBI5 491 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 DPF3Q92784 378 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 KAT2BQ92831 832 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 UIMC1Q96RL1 719 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 C16orf70Q9BSU1 422 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 TELO2Q9Y4R8 837 aa15.95■□□□□ 0.14
CCDC43-203ENST00000588210 MROH7Q68CQ1 1323 aa15.94■□□□□ 0.14
CCDC43-203ENST00000588210 SSU72P8A0A1W2PR75 194 aa15.94■□□□□ 0.14
CCDC43-203ENST00000588210 DDX39AO00148 427 aaKnown RBP15.94■□□□□ 0.14
CCDC43-203ENST00000588210 AKR1B10O60218 316 aa15.94■□□□□ 0.14
CCDC43-203ENST00000588210 GAS7O60861 476 aa15.94■□□□□ 0.14
CCDC43-203ENST00000588210 RNF40O75150 1001 aa15.94■□□□□ 0.14
CCDC43-203ENST00000588210 PSMC6P62333 389 aa15.94■□□□□ 0.14
CCDC43-203ENST00000588210 ASTE1Q2TB18 679 aaPredicted RBP15.94■□□□□ 0.14
CCDC43-203ENST00000588210 LRCH2Q5VUJ6 765 aa15.94■□□□□ 0.14
CCDC43-203ENST00000588210 ZNF746Q6NUN9 644 aaPredicted RBP15.94■□□□□ 0.14
CCDC43-203ENST00000588210 RRAGAQ7L523 313 aa15.94■□□□□ 0.14
CCDC43-203ENST00000588210 MYOCDQ8IZQ8 938 aa15.94■□□□□ 0.14
CCDC43-203ENST00000588210 SELENOOQ9BVL4 669 aa15.94■□□□□ 0.14
CCDC43-203ENST00000588210 TEKT3Q9BXF9 490 aa15.94■□□□□ 0.14
CCDC43-203ENST00000588210 FAM204AQ9H8W3 233 aa15.94■□□□□ 0.14
CCDC43-203ENST00000588210 HYOU1Q9Y4L1 999 aa15.94■□□□□ 0.14
CCDC43-203ENST00000588210 GRIN2DO15399 1336 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 KDM3AQ9Y4C1 1321 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 SCN10AQ9Y5Y9 1956 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 DNAH12Q6ZR08 3092 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 H3BRB1 525 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 EVI5O60447 810 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 PSMD10O75832 226 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 MOCS3O95396 460 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 CCNE2O96020 404 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 ZNF286BP0CG31 522 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 RTP1P59025 263 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 COASYQ13057 564 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 HYIQ5T013 277 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 NFRKBQ6P4R8 1299 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 SLFN12Q8IYM2 578 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 CCDC155Q8N6L0 562 aa15.93■□□□□ 0.14
CCDC43-203ENST00000588210 AENQ8WTP8 325 aaKnown RBP15.93■□□□□ 0.14
CCDC43-203ENST00000588210 DNAJC19Q96DA6 116 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms