RNA–Protein interactions for RNA: ENST00000587730.5

DDX39A-206, Transcript of DExD-box helicase 39A, humanhuman

TSL 1 (best)

Gene DDX39A, Length 1,813 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-206ENST00000587730 ZSWIM1Q9BR11 485 aa20.05■□□□□ 0.8
DDX39A-206ENST00000587730 TRIM51Q9BSJ1 452 aa20.05■□□□□ 0.8
DDX39A-206ENST00000587730 TIPINQ9BVW5 301 aa20.05■□□□□ 0.8
DDX39A-206ENST00000587730 TEKT3Q9BXF9 490 aa20.05■□□□□ 0.8
DDX39A-206ENST00000587730 ARHGEF10LQ9HCE6 1279 aa20.05■□□□□ 0.8
DDX39A-206ENST00000587730 CTTNBP2NLQ9P2B4 639 aa20.05■□□□□ 0.8
DDX39A-206ENST00000587730 LARSQ9P2J5 1176 aaKnown RBP20.05■□□□□ 0.8
DDX39A-206ENST00000587730 ALG6Q9Y672 507 aa20.05■□□□□ 0.8
DDX39A-206ENST00000587730 ASAP2O43150 1006 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 RASSF9O75901 435 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 HOXA13P31271 388 aaPredicted RBP20.04■□□□□ 0.8
DDX39A-206ENST00000587730 PDE6BP35913 854 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 ZC2HC1CQ53FD0 456 aaPredicted RBP20.04■□□□□ 0.8
DDX39A-206ENST00000587730 CYFIP1Q7L576 1253 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 CCDC134Q9H6E4 229 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 KLC4Q9NSK0 619 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 SEPT11Q9NVA2 429 aaKnown RBP20.04■□□□□ 0.8
DDX39A-206ENST00000587730 HERC5Q9UII4 1024 aaKnown RBP20.04■□□□□ 0.8
DDX39A-206ENST00000587730 SIPA1L1O43166 1804 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 SFI1A8K8P3 1242 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 RDXP35241 583 aaKnown RBP20.04■□□□□ 0.8
DDX39A-206ENST00000587730 MMP13P45452 471 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 TCP10Q12799 353 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 ITIH4Q14624 930 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 CYP1B1Q16678 543 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 PTPROQ16827 1216 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 MAGEC3Q8TD91 643 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 WDR18Q9BV38 432 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 NSRP1Q9H0G5 558 aaKnown RBP20.04■□□□□ 0.8
DDX39A-206ENST00000587730 GOPCQ9HD26 462 aa20.04■□□□□ 0.8
DDX39A-206ENST00000587730 CNOT8Q9UFF9 292 aaKnown RBP20.04■□□□□ 0.8
DDX39A-206ENST00000587730 IGSF9BQ9UPX0 1349 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 RGS16O15492 202 aaPredicted RBP20.03■□□□□ 0.8
DDX39A-206ENST00000587730 PLA2G6O60733 806 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 VIL1P09327 827 aaKnown RBP20.03■□□□□ 0.8
DDX39A-206ENST00000587730 DRD4P21917 467 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 TMOD1P28289 359 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 R3HDM1Q15032 1099 aaKnown RBP20.03■□□□□ 0.8
DDX39A-206ENST00000587730 ANKRD20A8PQ5CZ79 823 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 TAOK1Q7L7X3 1001 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 CCDC197Q8NCU1 140 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 LMO3Q8TAP4 145 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 CYP2W1Q8TAV3 490 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 CHURC1Q8WUH1 139 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 ARHGEF26Q96DR7 871 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 ACCSQ96QU6 501 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 NCAPGQ9BPX3 1015 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 ROPN1BQ9BZX4 212 aaPredicted RBP20.03■□□□□ 0.8
DDX39A-206ENST00000587730 ROPN1Q9HAT0 212 aaPredicted RBP20.03■□□□□ 0.8
DDX39A-206ENST00000587730 GEMIN8Q9NWZ8 242 aaKnown RBP20.03■□□□□ 0.8
DDX39A-206ENST00000587730 LOXHD1Q8IVV2 1947 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 ZNF536O15090 1300 aa20.03■□□□□ 0.8
DDX39A-206ENST00000587730 FOXN3O00409 490 aaPredicted RBP20.02■□□□□ 0.8
DDX39A-206ENST00000587730 FTLP02792 175 aaPredicted RBP20.02■□□□□ 0.8
DDX39A-206ENST00000587730 GSTA1P08263 222 aa20.02■□□□□ 0.8
DDX39A-206ENST00000587730 PTGIRP43119 386 aa20.02■□□□□ 0.8
DDX39A-206ENST00000587730 RBM5P52756 815 aaKnown RBP eCLIP20.02■□□□□ 0.8
DDX39A-206ENST00000587730 MCCD1P59942 119 aaPredicted RBP20.02■□□□□ 0.8
DDX39A-206ENST00000587730 TNIP1Q15025 636 aa20.02■□□□□ 0.8
DDX39A-206ENST00000587730 NBPF9Q3BBW0 867 aa20.02■□□□□ 0.8
DDX39A-206ENST00000587730 PHLDB3Q6NSJ2 640 aa20.02■□□□□ 0.8
DDX39A-206ENST00000587730 SH3BP5LQ7L8J4 393 aa20.02■□□□□ 0.8
DDX39A-206ENST00000587730 DNAAF5Q86Y56 855 aa20.02■□□□□ 0.8
DDX39A-206ENST00000587730 ZNF577Q9BSK1 485 aa20.02■□□□□ 0.8
DDX39A-206ENST00000587730 PASKQ96RG2 1323 aa20.02■□□□□ 0.8
DDX39A-206ENST00000587730 TRIM49P0CI25 452 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 TRIM49CP0CI26 452 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 RARGP13631 454 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 MAN1A1P33908 653 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 VAMP7P51809 220 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 PLTPP55058 493 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 ARHGAP44Q17R89 818 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 B3GNT9Q6UX72 402 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 NLGN1Q8N2Q7 840 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 ALG3Q92685 438 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 TRIM31Q9BZY9 425 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 ST6GALNAC4Q9H4F1 302 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 UVRAGQ9P2Y5 699 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 COG5Q9UP83 839 aa20.02■□□□□ 0.79
DDX39A-206ENST00000587730 CTNND1O60716 968 aaKnown RBP20.01■□□□□ 0.79
DDX39A-206ENST00000587730 DNAJC8O75937 253 aaPredicted RBP20.01■□□□□ 0.79
DDX39A-206ENST00000587730 GH2P01242 217 aa20.01■□□□□ 0.79
DDX39A-206ENST00000587730 ALAS1P13196 640 aa20.01■□□□□ 0.79
DDX39A-206ENST00000587730 ATP5DP30049 168 aa20.01■□□□□ 0.79
DDX39A-206ENST00000587730 COG2Q14746 738 aa20.01■□□□□ 0.79
DDX39A-206ENST00000587730 EPC2Q52LR7 807 aa20.01■□□□□ 0.79
DDX39A-206ENST00000587730 MFSD5Q6N075 450 aa20.01■□□□□ 0.79
DDX39A-206ENST00000587730 ZDHHC24Q6UX98 284 aa20.01■□□□□ 0.79
DDX39A-206ENST00000587730 TRMT10CQ7L0Y3 403 aaKnown RBP20.01■□□□□ 0.79
DDX39A-206ENST00000587730 NIPA1Q7RTP0 329 aa20.01■□□□□ 0.79
DDX39A-206ENST00000587730 C12orf50Q8NA57 414 aaPredicted RBP20.01■□□□□ 0.79
DDX39A-206ENST00000587730 MAIP1Q8WWC4 291 aa20.01■□□□□ 0.79
DDX39A-206ENST00000587730 MASTLQ96GX5 879 aa20.01■□□□□ 0.79
DDX39A-206ENST00000587730 DEFB129Q9H1M3 183 aa20.01■□□□□ 0.79
DDX39A-206ENST00000587730 POLD4Q9HCU8 107 aa20.01■□□□□ 0.79
DDX39A-206ENST00000587730 SLC40A1Q9NP59 571 aa20.01■□□□□ 0.79
DDX39A-206ENST00000587730 UBE2TQ9NPD8 197 aaPredicted RBP20.01■□□□□ 0.79
DDX39A-206ENST00000587730 DBR1Q9UK59 544 aaKnown RBP20.01■□□□□ 0.79
DDX39A-206ENST00000587730 FAM196BA6NMK8 535 aa20■□□□□ 0.79
DDX39A-206ENST00000587730 CHMP2AO43633 222 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms