RNA–Protein interactions for RNA: ENST00000587163.1

NPC1-205, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-205ENST00000587163 EMILIN2Q9BXX0 1053 aa18.3■□□□□ 0.52
NPC1-205ENST00000587163 C22orf23Q9BZE7 217 aa18.3■□□□□ 0.52
NPC1-205ENST00000587163 KCNK12Q9HB15 430 aa18.3■□□□□ 0.52
NPC1-205ENST00000587163 WRAP73Q9P2S5 460 aaPredicted RBP18.3■□□□□ 0.52
NPC1-205ENST00000587163 FAN1Q9Y2M0 1017 aa18.3■□□□□ 0.52
NPC1-205ENST00000587163 COL4A3BPQ9Y5P4 624 aa18.3■□□□□ 0.52
NPC1-205ENST00000587163 NRP1O14786 923 aa18.29■□□□□ 0.52
NPC1-205ENST00000587163 POMCP01189 267 aa18.29■□□□□ 0.52
NPC1-205ENST00000587163 ALDH2P05091 517 aa18.29■□□□□ 0.52
NPC1-205ENST00000587163 SRGAP2CP0DJJ0 459 aa18.29■□□□□ 0.52
NPC1-205ENST00000587163 SSRP1Q08945 709 aaKnown RBP18.29■□□□□ 0.52
NPC1-205ENST00000587163 TDGQ13569 410 aa18.29■□□□□ 0.52
NPC1-205ENST00000587163 TOB2Q14106 344 aaPredicted RBP18.29■□□□□ 0.52
NPC1-205ENST00000587163 CCDC149Q6ZUS6 474 aa18.29■□□□□ 0.52
NPC1-205ENST00000587163 CENPQQ7L2Z9 268 aaPredicted RBP18.29■□□□□ 0.52
NPC1-205ENST00000587163 OTOP3Q7RTS5 596 aa18.29■□□□□ 0.52
NPC1-205ENST00000587163 URGCPQ8TCY9 931 aa18.29■□□□□ 0.52
NPC1-205ENST00000587163 PRPF31Q8WWY3 499 aaKnown RBP18.29■□□□□ 0.52
NPC1-205ENST00000587163 TMEM143Q96AN5 459 aa18.29■□□□□ 0.52
NPC1-205ENST00000587163 RSAD1Q9HA92 442 aa18.29■□□□□ 0.52
NPC1-205ENST00000587163 DDX25Q9UHL0 483 aaKnown RBP18.29■□□□□ 0.52
NPC1-205ENST00000587163 RIF1Q5UIP0 2472 aaKnown RBP18.29■□□□□ 0.52
NPC1-205ENST00000587163 SPDYE4A6NLX3 237 aa18.28■□□□□ 0.52
NPC1-205ENST00000587163 C2CD2LO14523 706 aa18.28■□□□□ 0.52
NPC1-205ENST00000587163 N4BP1O75113 896 aaKnown RBP18.28■□□□□ 0.52
NPC1-205ENST00000587163 AOC1P19801 751 aa18.28■□□□□ 0.52
NPC1-205ENST00000587163 QARSP47897 775 aaKnown RBP18.28■□□□□ 0.52
NPC1-205ENST00000587163 INF2Q27J81 1249 aa18.28■□□□□ 0.52
NPC1-205ENST00000587163 LETM2Q2VYF4 491 aa18.28■□□□□ 0.52
NPC1-205ENST00000587163 MOXD1Q6UVY6 613 aa18.28■□□□□ 0.52
NPC1-205ENST00000587163 TRIM22Q8IYM9 498 aa18.28■□□□□ 0.52
NPC1-205ENST00000587163 FAM193BQ96PV7 902 aaPredicted RBP18.28■□□□□ 0.52
NPC1-205ENST00000587163 JPH2Q9BR39 696 aaPredicted RBP18.28■□□□□ 0.52
NPC1-205ENST00000587163 LARP6Q9BRS8 491 aaKnown RBP18.28■□□□□ 0.52
NPC1-205ENST00000587163 DHX33Q9H6R0 707 aaKnown RBP18.28■□□□□ 0.52
NPC1-205ENST00000587163 MRPL17Q9NRX2 175 aaKnown RBP18.28■□□□□ 0.52
NPC1-205ENST00000587163 VAV3Q9UKW4 847 aa18.28■□□□□ 0.52
NPC1-205ENST00000587163 NARSO43776 548 aaKnown RBP18.27■□□□□ 0.52
NPC1-205ENST00000587163 MYBP10242 640 aa18.27■□□□□ 0.52
NPC1-205ENST00000587163 LAMTOR4Q0VGL1 99 aa18.27■□□□□ 0.52
NPC1-205ENST00000587163 NONOQ15233 471 aaKnown RBP eCLIP18.27■□□□□ 0.52
NPC1-205ENST00000587163 SRGAP1Q7Z6B7 1085 aa18.27■□□□□ 0.52
NPC1-205ENST00000587163 DAGLBQ8NCG7 672 aa18.27■□□□□ 0.52
NPC1-205ENST00000587163 SMG8Q8ND04 991 aaKnown RBP18.27■□□□□ 0.52
NPC1-205ENST00000587163 SLC7A3Q8WY07 619 aa18.27■□□□□ 0.52
NPC1-205ENST00000587163 NKD2Q969F2 451 aaPredicted RBP18.27■□□□□ 0.52
NPC1-205ENST00000587163 CEP170P1Q96L14 293 aa18.27■□□□□ 0.52
NPC1-205ENST00000587163 TMEM175Q9BSA9 504 aa18.27■□□□□ 0.52
NPC1-205ENST00000587163 BMP2KQ9NSY1 1161 aaPredicted RBP18.27■□□□□ 0.52
NPC1-205ENST00000587163 MARCH5Q9NX47 278 aa18.27■□□□□ 0.52
NPC1-205ENST00000587163 KANSL3Q9P2N6 904 aa18.27■□□□□ 0.52
NPC1-205ENST00000587163 DUSP12Q9UNI6 340 aa18.27■□□□□ 0.52
NPC1-205ENST00000587163 SOD2P04179 222 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 NCLP19338 710 aaKnown RBP18.26■□□□□ 0.51
NPC1-205ENST00000587163 PSMA5P28066 241 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 AK2P54819 239 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 PPP2R5CQ13362 524 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 C15orf39Q6ZRI6 1047 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 SIX5Q8N196 739 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 PSPC1Q8WXF1 523 aaKnown RBP18.26■□□□□ 0.51
NPC1-205ENST00000587163 RSAD2Q8WXG1 361 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 RPS6KC1Q96S38 1066 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 RNF39Q9H2S5 420 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 MAN1C1Q9NR34 630 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 MIOSQ9NXC5 875 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 STK39Q9UEW8 545 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 KCNJ14Q9UNX9 436 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 PRG3Q9Y2Y8 225 aaPredicted RBP18.26■□□□□ 0.51
NPC1-205ENST00000587163 FAM186AA6NE01 2351 aa18.26■□□□□ 0.51
NPC1-205ENST00000587163 CNTNAP2Q9UHC6 1331 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 CCDC195A0A1B0GUA6 201 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 F8W810 466 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 ZBTB39O15060 712 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 TEX28O15482 410 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 DEXIO95424 95 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 EFEMP2O95967 443 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 P4HBP07237 508 aaKnown RBP18.25■□□□□ 0.51
NPC1-205ENST00000587163 KIAA0319Q5VV43 1072 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 RUFY3Q7L099 469 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 CCDC105Q8IYK2 499 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 COLGALT2Q8IYK4 626 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 ADSSL1Q8N142 457 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 CMASQ8NFW8 434 aaPredicted RBP18.25■□□□□ 0.51
NPC1-205ENST00000587163 HERC2P3Q9BVR0 1158 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 EIF2AQ9BY44 585 aaKnown RBP18.25■□□□□ 0.51
NPC1-205ENST00000587163 SLKQ9H2G2 1235 aaPredicted RBP18.25■□□□□ 0.51
NPC1-205ENST00000587163 KCNMB3Q9NPA1 279 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 FBXL21Q9UKT6 434 aa18.25■□□□□ 0.51
NPC1-205ENST00000587163 OR1G1P47890 313 aa18.24■□□□□ 0.51
NPC1-205ENST00000587163 ANGPT1Q15389 498 aa18.24■□□□□ 0.51
NPC1-205ENST00000587163 GALNT17Q6IS24 598 aa18.24■□□□□ 0.51
NPC1-205ENST00000587163 FERMT3Q86UX7 667 aa18.24■□□□□ 0.51
NPC1-205ENST00000587163 RNF168Q8IYW5 571 aaPredicted RBP18.24■□□□□ 0.51
NPC1-205ENST00000587163 DTWD2Q8NBA8 298 aa18.24■□□□□ 0.51
NPC1-205ENST00000587163 RNF149Q8NC42 400 aa18.24■□□□□ 0.51
NPC1-205ENST00000587163 HAS1Q92839 578 aa18.24■□□□□ 0.51
NPC1-205ENST00000587163 FAM20AQ96MK3 541 aa18.24■□□□□ 0.51
NPC1-205ENST00000587163 ZSWIM6Q9HCJ5 1215 aa18.24■□□□□ 0.51
NPC1-205ENST00000587163 WDR6Q9NNW5 1121 aaKnown RBP18.24■□□□□ 0.51
NPC1-205ENST00000587163 RGL1Q9NZL6 768 aa18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms