RNA–Protein interactions for RNA: ENST00000586495.1

TRIM47-203, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 605 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-203ENST00000586495 TECP42680 631 aa18.87■□□□□ 0.61
TRIM47-203ENST00000586495 KCNC3Q14003 757 aa18.87■□□□□ 0.61
TRIM47-203ENST00000586495 NOTUMQ6P988 496 aa18.87■□□□□ 0.61
TRIM47-203ENST00000586495 IFNLR1Q8IU57 520 aaPredicted RBP18.87■□□□□ 0.61
TRIM47-203ENST00000586495 MRPL43Q8N983 215 aaKnown RBP18.87■□□□□ 0.61
TRIM47-203ENST00000586495 FBXO18Q8NFZ0 1043 aa18.87■□□□□ 0.61
TRIM47-203ENST00000586495 VN1R2Q8NFZ6 395 aa18.87■□□□□ 0.61
TRIM47-203ENST00000586495 ERMNQ8TAM6 284 aa18.87■□□□□ 0.61
TRIM47-203ENST00000586495 PIGOQ8TEQ8 1089 aa18.87■□□□□ 0.61
TRIM47-203ENST00000586495 CCDC51Q96ER9 411 aa18.87■□□□□ 0.61
TRIM47-203ENST00000586495 C11orf16Q9NQ32 467 aa18.87■□□□□ 0.61
TRIM47-203ENST00000586495 RAPGEFL1Q9UHV5 662 aa18.87■□□□□ 0.61
TRIM47-203ENST00000586495 HCN4Q9Y3Q4 1203 aa18.87■□□□□ 0.61
TRIM47-203ENST00000586495 C2orf71A6NGG8 1288 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 PRR33A8MZF0 331 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 CXCL14O95715 111 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 GALTP07902 379 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 HOXB8P17481 243 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-203ENST00000586495 NCLP19338 710 aaKnown RBP18.86■□□□□ 0.61
TRIM47-203ENST00000586495 ARL2P36404 184 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 RBM25P49756 843 aaKnown RBP18.86■□□□□ 0.61
TRIM47-203ENST00000586495 GIT2Q14161 759 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 UBXN11Q5T124 520 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 ANKRD54Q6NXT1 300 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 AGMOQ6ZNB7 445 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 VPS52Q8N1B4 723 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 TMEM87AQ8NBN3 555 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 CASP10Q92851 521 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 IGSF21Q96ID5 467 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 FAM193BQ96PV7 902 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-203ENST00000586495 PHF7Q9BWX1 381 aaPredicted RBP18.86■□□□□ 0.61
TRIM47-203ENST00000586495 GBP3Q9H0R5 595 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 STK39Q9UEW8 545 aa18.86■□□□□ 0.61
TRIM47-203ENST00000586495 TSPAN1O60635 241 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 USO1O60763 962 aaKnown RBP18.85■□□□□ 0.61
TRIM47-203ENST00000586495 OR52Z1P0C646 297 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 SPATA31C1P0DKV0 1188 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 ITGA4P13612 1032 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 TRAPPC10P48553 1259 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 RBM10P98175 930 aaKnown RBP18.85■□□□□ 0.61
TRIM47-203ENST00000586495 CAPSQ13938 189 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 ZNF174Q15697 407 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 C8orf34Q49A92 452 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 LLGL2Q6P1M3 1020 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 DDX53Q86TM3 631 aaKnown RBP18.85■□□□□ 0.61
TRIM47-203ENST00000586495 CATSPER3Q86XQ3 398 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 ASAP3Q8TDY4 903 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 NACC1Q96RE7 527 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 KIF2CQ99661 725 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 POLR3CQ9BUI4 534 aaPredicted RBP18.85■□□□□ 0.61
TRIM47-203ENST00000586495 NFKBIZQ9BYH8 718 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 NOL7Q9UMY1 257 aaKnown RBP18.85■□□□□ 0.61
TRIM47-203ENST00000586495 ARID2Q68CP9 1835 aa18.85■□□□□ 0.61
TRIM47-203ENST00000586495 ALDH2P05091 517 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 GLRA2P23416 452 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 SLC11A1P49279 550 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 TPRNQ4KMQ1 711 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 TTC38Q5R3I4 469 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 ZNF280BQ86YH2 543 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 RNF135Q8IUD6 432 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 NOSTRINQ8IVI9 506 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 HACE1Q8IYU2 909 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 MCPH1Q8NEM0 835 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 SUSD6Q92537 303 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 TMEM175Q9BSA9 504 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 ZBP1Q9H171 429 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 CSRNP2Q9H175 543 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 POLR3FQ9H1D9 316 aaPredicted RBP18.84■□□□□ 0.61
TRIM47-203ENST00000586495 DNAJB4Q9UDY4 337 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 DBR1Q9UK59 544 aaKnown RBP18.84■□□□□ 0.61
TRIM47-203ENST00000586495 FAN1Q9Y2M0 1017 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 ARIH1Q9Y4X5 557 aaPredicted RBP18.84■□□□□ 0.61
TRIM47-203ENST00000586495 IRAK3Q9Y616 596 aa18.84■□□□□ 0.61
TRIM47-203ENST00000586495 LOC730098B7Z3J9 87 aa18.83■□□□□ 0.6
TRIM47-203ENST00000586495 CLASP2O75122 1294 aaKnown RBP18.83■□□□□ 0.6
TRIM47-203ENST00000586495 MED24O75448 989 aa18.83■□□□□ 0.6
TRIM47-203ENST00000586495 CTSAP10619 480 aa18.83■□□□□ 0.6
TRIM47-203ENST00000586495 MUTP22033 750 aa18.83■□□□□ 0.6
TRIM47-203ENST00000586495 RPA1P27694 616 aa18.83■□□□□ 0.6
TRIM47-203ENST00000586495 MBTD1Q05BQ5 628 aa18.83■□□□□ 0.6
TRIM47-203ENST00000586495 CBX2Q14781 532 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-203ENST00000586495 HERC4Q5GLZ8 1057 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-203ENST00000586495 HAUS3Q68CZ6 603 aa18.83■□□□□ 0.6
TRIM47-203ENST00000586495 TMEM173Q86WV6 379 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-203ENST00000586495 SMG8Q8ND04 991 aaKnown RBP18.83■□□□□ 0.6
TRIM47-203ENST00000586495 CPB2Q96IY4 423 aa18.83■□□□□ 0.6
TRIM47-203ENST00000586495 TRIM6Q9C030 488 aaPredicted RBP18.83■□□□□ 0.6
TRIM47-203ENST00000586495 S1PR5Q9H228 398 aa18.83■□□□□ 0.6
TRIM47-203ENST00000586495 IPPQ9Y573 584 aa18.83■□□□□ 0.6
TRIM47-203ENST00000586495 HCFC2Q9Y5Z7 792 aa18.83■□□□□ 0.6
TRIM47-203ENST00000586495 A0A087WWV3 80 aa18.82■□□□□ 0.6
TRIM47-203ENST00000586495 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.82■□□□□ 0.6
TRIM47-203ENST00000586495 DDHD2O94830 711 aa18.82■□□□□ 0.6
TRIM47-203ENST00000586495 POMCP01189 267 aa18.82■□□□□ 0.6
TRIM47-203ENST00000586495 ARF4P18085 180 aaPredicted RBP18.82■□□□□ 0.6
TRIM47-203ENST00000586495 RABEP1Q15276 862 aa18.82■□□□□ 0.6
TRIM47-203ENST00000586495 SYCE2Q6PIF2 218 aa18.82■□□□□ 0.6
TRIM47-203ENST00000586495 RPGRIP1Q96KN7 1286 aa18.82■□□□□ 0.6
TRIM47-203ENST00000586495 EIF2AQ9BY44 585 aaKnown RBP18.82■□□□□ 0.6
TRIM47-203ENST00000586495 MUTYHQ9UIF7 546 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms