RNA–Protein interactions for RNA: ENST00000585241.5

SS18-226, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-226ENST00000585241 FAM126BQ8IXS8 530 aa17.71■□□□□ 0.43
SS18-226ENST00000585241 DHX38Q92620 1227 aaKnown RBP17.71■□□□□ 0.43
SS18-226ENST00000585241 PRIMPOLQ96LW4 560 aa17.71■□□□□ 0.43
SS18-226ENST00000585241 THAP9Q9H5L6 903 aa17.71■□□□□ 0.43
SS18-226ENST00000585241 MINDY3Q9H8M7 445 aa17.71■□□□□ 0.43
SS18-226ENST00000585241 AGPAT3Q9NRZ7 376 aa17.71■□□□□ 0.43
SS18-226ENST00000585241 TRMT13Q9NUP7 481 aaKnown RBP17.71■□□□□ 0.43
SS18-226ENST00000585241 DMAC2Q9NW81 257 aa17.71■□□□□ 0.43
SS18-226ENST00000585241 STYXL1Q9Y6J8 313 aa17.71■□□□□ 0.43
SS18-226ENST00000585241 ACKR2O00590 384 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 B4GALT4O60513 344 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 EDN1P05305 212 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 PRKCBP05771 671 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 CRYBB1P53674 252 aaPredicted RBP17.7■□□□□ 0.42
SS18-226ENST00000585241 MRPS6P82932 125 aaKnown RBP17.7■□□□□ 0.42
SS18-226ENST00000585241 AMHR2Q16671 573 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 FAM26DQ5JW98 314 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 SLC39A4Q6P5W5 647 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 SYCP3Q8IZU3 236 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 CSGALNACT2Q8N6G5 542 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 NLRP7Q8WX94 980 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 CEP63Q96MT8 703 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 TMEM106CQ9BVX2 250 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 GCOM2Q9BZD3 368 aaPredicted RBP17.7■□□□□ 0.42
SS18-226ENST00000585241 IKZF4Q9H2S9 585 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 GRPEL1Q9HAV7 217 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 PRMT7Q9NVM4 692 aaPredicted RBP17.7■□□□□ 0.42
SS18-226ENST00000585241 FANCLQ9NW38 375 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 TRPV2Q9Y5S1 764 aa17.7■□□□□ 0.42
SS18-226ENST00000585241 FGFR1OPO95684 399 aaKnown RBP17.69■□□□□ 0.42
SS18-226ENST00000585241 CD4P01730 458 aa17.69■□□□□ 0.42
SS18-226ENST00000585241 NR3C1P04150 777 aa17.69■□□□□ 0.42
SS18-226ENST00000585241 IQCF3P0C7M6 154 aa17.69■□□□□ 0.42
SS18-226ENST00000585241 DARSP14868 501 aaKnown RBP17.69■□□□□ 0.42
SS18-226ENST00000585241 TPM4P67936 248 aa17.69■□□□□ 0.42
SS18-226ENST00000585241 KIZQ2M2Z5 673 aa17.69■□□□□ 0.42
SS18-226ENST00000585241 IRF2BP1Q8IU81 584 aa17.69■□□□□ 0.42
SS18-226ENST00000585241 ZNF668Q96K58 619 aaPredicted RBP17.69■□□□□ 0.42
SS18-226ENST00000585241 SRRTQ9BXP5 876 aaKnown RBP17.69■□□□□ 0.42
SS18-226ENST00000585241 MRPL4Q9BYD3 311 aaKnown RBP17.69■□□□□ 0.42
SS18-226ENST00000585241 CELF4Q9BZC1 486 aaKnown RBP17.69■□□□□ 0.42
SS18-226ENST00000585241 INO80BQ9C086 356 aaPredicted RBP17.69■□□□□ 0.42
SS18-226ENST00000585241 SENP6Q9GZR1 1112 aaPredicted RBP17.69■□□□□ 0.42
SS18-226ENST00000585241 SAMSN1Q9NSI8 373 aaKnown RBP17.69■□□□□ 0.42
SS18-226ENST00000585241 MROH7Q68CQ1 1323 aa17.69■□□□□ 0.42
SS18-226ENST00000585241 ANKRD63C9JTQ0 380 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 INO80B-WBP1J3KQ70 363 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 HNRNPDLO14979 420 aaKnown RBP17.68■□□□□ 0.42
SS18-226ENST00000585241 GARTP22102 1010 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 EIF4BP23588 611 aaKnown RBP17.68■□□□□ 0.42
SS18-226ENST00000585241 NR2F2P24468 414 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 RPL13P26373 211 aaKnown RBP17.68■□□□□ 0.42
SS18-226ENST00000585241 MRE11P49959 708 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 MARSP56192 900 aaKnown RBP17.68■□□□□ 0.42
SS18-226ENST00000585241 TPD52L1Q16890 204 aaPredicted RBP17.68■□□□□ 0.42
SS18-226ENST00000585241 SLC39A5Q6ZMH5 540 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 ANKRD33Q7Z3H0 272 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 FILIP1Q7Z7B0 1213 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 DIS3LQ8TF46 1054 aaKnown RBP17.68■□□□□ 0.42
SS18-226ENST00000585241 PPP1R16BQ96T49 567 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 OSMRQ99650 979 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 TRPV6Q9H1D0 765 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 CDHR5Q9HBB8 845 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 NOD1Q9Y239 953 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 CDY2AQ9Y6F7 541 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 CNTNAP2Q9UHC6 1331 aa17.68■□□□□ 0.42
SS18-226ENST00000585241 TISP43B9A030 160 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 M0QZ92 97 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 ABLIM1O14639 778 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 KIAA0391O15091 583 aaKnown RBP17.67■□□□□ 0.42
SS18-226ENST00000585241 CETN3O15182 167 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 PROZP22891 400 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 ADSSP30520 456 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 LIG4P49917 911 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 SPAG1Q07617 926 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 TMEM62Q0P6H9 643 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 SARM1Q6SZW1 724 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 TSHZ1Q6ZSZ6 1077 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 FAM114A1Q8IWE2 563 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 CAGE1Q8TC20 777 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 TMEM40Q8WWA1 233 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 SCLT1Q96NL6 688 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 TOX2Q96NM4 488 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 ACO2Q99798 780 aaKnown RBP17.67■□□□□ 0.42
SS18-226ENST00000585241 MKNK1Q9BUB5 465 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 TARS2Q9BW92 718 aaKnown RBP17.67■□□□□ 0.42
SS18-226ENST00000585241 PTPRHQ9HD43 1115 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 BRCA2P51587 3418 aa17.67■□□□□ 0.42
SS18-226ENST00000585241 TTLL13PA6NNM8 815 aa17.66■□□□□ 0.42
SS18-226ENST00000585241 CLIC2O15247 247 aa17.66■□□□□ 0.42
SS18-226ENST00000585241 SLC16A3O15427 465 aaKnown RBP17.66■□□□□ 0.42
SS18-226ENST00000585241 TSPAN1O60635 241 aa17.66■□□□□ 0.42
SS18-226ENST00000585241 TOM1L1O75674 476 aa17.66■□□□□ 0.42
SS18-226ENST00000585241 GNA14O95837 355 aa17.66■□□□□ 0.42
SS18-226ENST00000585241 CHRNA1P02708 482 aa17.66■□□□□ 0.42
SS18-226ENST00000585241 EEF1GP26641 437 aaKnown RBP17.66■□□□□ 0.42
SS18-226ENST00000585241 MCCD1P59942 119 aaPredicted RBP17.66■□□□□ 0.42
SS18-226ENST00000585241 ADAM9Q13443 819 aa17.66■□□□□ 0.42
SS18-226ENST00000585241 PRPF4BQ13523 1007 aaKnown RBP17.66■□□□□ 0.42
SS18-226ENST00000585241 SLFN12LQ6IEE8 588 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms