RNA–Protein interactions for RNA: ENST00000584888.1

ERBB2-221, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 500 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-221ENST00000584888 PLPP4Q5VZY2 271 aa19.83■□□□□ 0.77
ERBB2-221ENST00000584888 SRGAP1Q7Z6B7 1085 aa19.83■□□□□ 0.77
ERBB2-221ENST00000584888 IFNLR1Q8IU57 520 aaPredicted RBP19.83■□□□□ 0.77
ERBB2-221ENST00000584888 ERMNQ8TAM6 284 aa19.83■□□□□ 0.77
ERBB2-221ENST00000584888 HELQQ8TDG4 1101 aa19.83■□□□□ 0.77
ERBB2-221ENST00000584888 FAM122AQ96E09 287 aa19.83■□□□□ 0.77
ERBB2-221ENST00000584888 INTS4Q96HW7 963 aaKnown RBP19.83■□□□□ 0.77
ERBB2-221ENST00000584888 LRWD1Q9UFC0 647 aa19.83■□□□□ 0.77
ERBB2-221ENST00000584888 ARIH1Q9Y4X5 557 aaPredicted RBP19.83■□□□□ 0.77
ERBB2-221ENST00000584888 FSD2A1L4K1 749 aa19.82■□□□□ 0.76
ERBB2-221ENST00000584888 SRGAP2CP0DJJ0 459 aa19.82■□□□□ 0.76
ERBB2-221ENST00000584888 PHKA2P46019 1235 aa19.82■□□□□ 0.76
ERBB2-221ENST00000584888 PTENP60484 403 aa19.82■□□□□ 0.76
ERBB2-221ENST00000584888 MXD4Q14582 209 aaPredicted RBP19.82■□□□□ 0.76
ERBB2-221ENST00000584888 TWF2Q6IBS0 349 aaKnown RBP19.82■□□□□ 0.76
ERBB2-221ENST00000584888 POTEGQ6S5H5 508 aa19.82■□□□□ 0.76
ERBB2-221ENST00000584888 RNF135Q8IUD6 432 aa19.82■□□□□ 0.76
ERBB2-221ENST00000584888 ASAP3Q8TDY4 903 aa19.82■□□□□ 0.76
ERBB2-221ENST00000584888 SNX21Q969T3 373 aa19.82■□□□□ 0.76
ERBB2-221ENST00000584888 NGRNQ9NPE2 291 aaKnown RBP19.82■□□□□ 0.76
ERBB2-221ENST00000584888 ENTPD7Q9NQZ7 604 aa19.82■□□□□ 0.76
ERBB2-221ENST00000584888 USP15Q9Y4E8 981 aaPredicted RBP19.82■□□□□ 0.76
ERBB2-221ENST00000584888 HIDE1A8MVS5 230 aa19.81■□□□□ 0.76
ERBB2-221ENST00000584888 HOXA11P31270 313 aaPredicted RBP19.81■□□□□ 0.76
ERBB2-221ENST00000584888 KCNC3Q14003 757 aa19.81■□□□□ 0.76
ERBB2-221ENST00000584888 TMEM184AQ6ZMB5 413 aa19.81■□□□□ 0.76
ERBB2-221ENST00000584888 CATSPER4Q7RTX7 472 aa19.81■□□□□ 0.76
ERBB2-221ENST00000584888 SLC39A11Q8N1S5 342 aa19.81■□□□□ 0.76
ERBB2-221ENST00000584888 MMTAG2Q9BU76 263 aaKnown RBP19.81■□□□□ 0.76
ERBB2-221ENST00000584888 MRPL9Q9BYD2 267 aaKnown RBP19.81■□□□□ 0.76
ERBB2-221ENST00000584888 MUTYHQ9UIF7 546 aa19.81■□□□□ 0.76
ERBB2-221ENST00000584888 PIN4Q9Y237 131 aaKnown RBP19.81■□□□□ 0.76
ERBB2-221ENST00000584888 STK24Q9Y6E0 443 aa19.81■□□□□ 0.76
ERBB2-221ENST00000584888 K7ELQ4 463 aaPredicted RBP19.8■□□□□ 0.76
ERBB2-221ENST00000584888 ZNF623O75123 536 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 SKIP12755 728 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 GLRA2P23416 452 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 CCT6AP40227 531 aaKnown RBP19.8■□□□□ 0.76
ERBB2-221ENST00000584888 CAPSQ13938 189 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 LONRF3Q496Y0 759 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 HAUS3Q68CZ6 603 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 DTHD1Q6ZMT9 781 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 TMC7Q7Z402 723 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 BRAPQ7Z569 592 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 RNF149Q8NC42 400 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 LPPQ93052 612 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 NFKBIZQ9BYH8 718 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 AGPAT5Q9NUQ2 364 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 FAM105AQ9NUU6 356 aa19.8■□□□□ 0.76
ERBB2-221ENST00000584888 NT5C1B-RDH14C9J2C7 533 aa19.79■□□□□ 0.76
ERBB2-221ENST00000584888 USO1O60763 962 aaKnown RBP19.79■□□□□ 0.76
ERBB2-221ENST00000584888 CYP11B2P19099 503 aa19.79■□□□□ 0.76
ERBB2-221ENST00000584888 PDCP20941 246 aa19.79■□□□□ 0.76
ERBB2-221ENST00000584888 ALDH7A1P49419 539 aaKnown RBP19.79■□□□□ 0.76
ERBB2-221ENST00000584888 BCAR1P56945 870 aa19.79■□□□□ 0.76
ERBB2-221ENST00000584888 HERC4Q5GLZ8 1057 aaPredicted RBP19.79■□□□□ 0.76
ERBB2-221ENST00000584888 ARL6IP4Q66PJ3 421 aaKnown RBP19.79■□□□□ 0.76
ERBB2-221ENST00000584888 RAB34Q9BZG1 259 aa19.79■□□□□ 0.76
ERBB2-221ENST00000584888 MEIS3P2A8K0S8 358 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 PP2D1A8MPX8 630 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 LOC730098B7Z3J9 87 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 SRGAP2BP0DMP2 458 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 SYT1P21579 422 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 PCBP1Q15365 356 aaKnown RBP eCLIP19.78■□□□□ 0.76
ERBB2-221ENST00000584888 AMHR2Q16671 573 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 HYIQ5T013 277 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 ANKRD54Q6NXT1 300 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 PADI6Q6TGC4 694 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 GLB1LQ6UWU2 654 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 MRPL43Q8N983 215 aaKnown RBP19.78■□□□□ 0.76
ERBB2-221ENST00000584888 MCPH1Q8NEM0 835 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 RSPH1Q8WYR4 309 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 SUSD6Q92537 303 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 PHF7Q9BWX1 381 aaPredicted RBP19.78■□□□□ 0.76
ERBB2-221ENST00000584888 POLR3FQ9H1D9 316 aaPredicted RBP19.78■□□□□ 0.76
ERBB2-221ENST00000584888 S1PR5Q9H228 398 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 GPRC5CQ9NQ84 441 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 KIAA1024Q9UPX6 916 aa19.78■□□□□ 0.76
ERBB2-221ENST00000584888 ZC3H11AO75152 810 aaKnown RBP eCLIP19.77■□□□□ 0.76
ERBB2-221ENST00000584888 OFD1O75665 1012 aa19.77■□□□□ 0.76
ERBB2-221ENST00000584888 CDC25AP30304 524 aa19.77■□□□□ 0.76
ERBB2-221ENST00000584888 RAB27AP51159 221 aa19.77■□□□□ 0.76
ERBB2-221ENST00000584888 MBTD1Q05BQ5 628 aa19.77■□□□□ 0.76
ERBB2-221ENST00000584888 TFDP1Q14186 410 aa19.77■□□□□ 0.76
ERBB2-221ENST00000584888 SMC1AQ14683 1233 aaKnown RBP19.77■□□□□ 0.76
ERBB2-221ENST00000584888 NOMO2Q5JPE7 1267 aa19.77■□□□□ 0.76
ERBB2-221ENST00000584888 UBXN11Q5T124 520 aa19.77■□□□□ 0.76
ERBB2-221ENST00000584888 LLGL2Q6P1M3 1020 aa19.77■□□□□ 0.76
ERBB2-221ENST00000584888 SYCE2Q6PIF2 218 aa19.77■□□□□ 0.76
ERBB2-221ENST00000584888 MRPL10Q7Z7H8 261 aaKnown RBP19.77■□□□□ 0.76
ERBB2-221ENST00000584888 SNX29Q8TEQ0 813 aa19.77■□□□□ 0.76
ERBB2-221ENST00000584888 CCDC43Q96MW1 224 aaKnown RBP19.77■□□□□ 0.76
ERBB2-221ENST00000584888 DDX19AQ9NUU7 478 aaKnown RBP19.77■□□□□ 0.76
ERBB2-221ENST00000584888 TBC1D13Q9NVG8 400 aa19.77■□□□□ 0.76
ERBB2-221ENST00000584888 PCDHB2Q9Y5E7 798 aa19.77■□□□□ 0.76
ERBB2-221ENST00000584888 C5orf42Q9H799 3197 aa19.77■□□□□ 0.75
ERBB2-221ENST00000584888 ARHGEF35A5YM69 484 aa19.76■□□□□ 0.75
ERBB2-221ENST00000584888 C2orf71A6NGG8 1288 aa19.76■□□□□ 0.75
ERBB2-221ENST00000584888 CBX2Q14781 532 aaPredicted RBP19.76■□□□□ 0.75
ERBB2-221ENST00000584888 KRT79Q5XKE5 535 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms