RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 TFDP1Q14186 410 aa17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 KLHL40Q2TBA0 621 aa17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 SRGAP1Q7Z6B7 1085 aa17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 DAW1Q8N136 415 aa17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 ZNF668Q96K58 619 aaPredicted RBP17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 COL25A1Q9BXS0 654 aaPredicted RBP17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 POLR3FQ9H1D9 316 aaPredicted RBP17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 CLSTN2Q9H4D0 955 aa17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 POLD4Q9HCU8 107 aa17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 GPRC5CQ9NQ84 441 aa17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 C1orf112Q9NSG2 853 aa17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 HOOK1Q9UJC3 728 aaKnown RBP17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 ODF2LQ9ULJ1 636 aa17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 INSL6Q9Y581 213 aa17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 TTC28Q96AY4 2481 aa17.64■□□□□ 0.41
CSNK1D-223ENST00000584472 DENND3A2RUS2 1198 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 HIP1RO75146 1068 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 SRGAP2CP0DJJ0 459 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 HTRA4P83105 476 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 DPYDQ12882 1025 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 PNOCQ13519 176 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 DSC3Q14574 896 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 PCBP1Q15365 356 aaKnown RBP eCLIP17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 SKOR2Q2VWA4 1001 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 FAM102BQ5T8I3 360 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 TMCO2Q7Z6W1 182 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 RTN4RL1Q86UN2 441 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 IFNLR1Q8IU57 520 aaPredicted RBP17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 NPAS4Q8IUM7 802 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 RNF149Q8NC42 400 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 KIFAP3Q92845 792 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 ADAM2Q99965 735 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 NFKBIZQ9BYH8 718 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 NUP62CLQ9H1M0 184 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 RGS18Q9NS28 235 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 THEGQ9P2T0 379 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 MUC3AQ02505 3323 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 REV3LO60673 3130 aa17.63■□□□□ 0.41
CSNK1D-223ENST00000584472 FRMD3A2A2Y4 597 aa17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 TRAK2O60296 914 aa17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 MGEA5O60502 916 aa17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 GLRA2P23416 452 aa17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 PTENP60484 403 aa17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 CAPSQ13938 189 aa17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 CAMK4Q16566 473 aa17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 TJAP1Q5JTD0 557 aa17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 SLC24A5Q71RS6 500 aa17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 CRIPAKQ8N1N5 446 aa17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 SP7Q8TDD2 431 aaPredicted RBP17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 ASAP3Q8TDY4 903 aa17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 DRC1Q96MC2 740 aa17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 CHST12Q9NRB3 414 aa17.62■□□□□ 0.41
CSNK1D-223ENST00000584472 XIRP2A4UGR9 3374 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 SFI1A8K8P3 1242 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 C9IYK1 514 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 KLRC4O43908 158 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 STAG3L1P0CL83 205 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 ZSCAN20P17040 1043 aaPredicted RBP17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 IGFBP4P22692 258 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 SARSP49591 514 aaKnown RBP17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 ZNF131P52739 623 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 ERVK-21P61565 698 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 ASIC1P78348 528 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 PPP2R5AQ15172 486 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 FAM117BQ6P1L5 589 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 UNC13DQ70J99 1090 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 CATSPER4Q7RTX7 472 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 ERCC4Q92889 916 aaPredicted RBP17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 YME1L1Q96TA2 773 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 TMEM63CQ9P1W3 806 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 MTCH2Q9Y6C9 303 aa17.61■□□□□ 0.41
CSNK1D-223ENST00000584472 PVALEFA0A1B0GWK0 134 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 TBCAO75347 108 aaKnown RBP17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 CSDE1O75534 798 aaKnown RBP17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 FAM13AO94988 1023 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 UPP2O95045 317 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 IDEP14735 1019 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 FGFR4P22455 802 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 FAM189BP81408 668 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 CCDC183Q5T5S1 534 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 CCDC65Q8IXS2 484 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 SPATA20Q8TB22 786 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 SAMD11Q96NU1 681 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 TGS1Q96RS0 853 aaKnown RBP17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 TRAIPQ9BWF2 469 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 ZHX3Q9H4I2 956 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 MINDY3Q9H8M7 445 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 C17orf75Q9HAS0 396 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 PARVGQ9HBI0 331 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 AGPAT5Q9NUQ2 364 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 PANK4Q9NVE7 773 aa17.6■□□□□ 0.41
CSNK1D-223ENST00000584472 LCHNA4D1U4 455 aa17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 RPN1P04843 607 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 PLS3P13797 630 aa17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 GAP43P17677 238 aa17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 NAMPTP43490 491 aa17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 CDCA2Q69YH5 1023 aaPredicted RBP17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 CAVIN1Q6NZI2 390 aaKnown RBP17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 BSNDQ8WZ55 320 aa17.59■□□□□ 0.41
CSNK1D-223ENST00000584472 IFT74Q96LB3 600 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms