RNA–Protein interactions for RNA: ENST00000583965.5

CDRT1-207, CMT1A duplicated region transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDRT1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-207ENST00000583965 MINDY3Q9H8M7 445 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 ANO10Q9NW15 660 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 PRKAG2Q9UGJ0 569 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 DACH1Q9UI36 760 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 GDAQ9Y2T3 454 aa12.81□□□□□ -0.36
CDRT1-207ENST00000583965 ANK1P16157 1881 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 PDCD11Q14690 1871 aaKnown RBP12.8□□□□□ -0.36
CDRT1-207ENST00000583965 RALGAPA2Q2PPJ7 1873 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 SYCE3A1L190 88 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 PSMA7O14818 248 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 GPR182O15218 404 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 EVI5O60447 810 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 RPS6KA5O75582 802 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 PIGRP01833 764 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 RAG1P15918 1043 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 PRCPP42785 496 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 SNRPFP62306 86 aaKnown RBP12.8□□□□□ -0.36
CDRT1-207ENST00000583965 TYRO3Q06418 890 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 KNOP1Q1ED39 458 aaKnown RBP12.8□□□□□ -0.36
CDRT1-207ENST00000583965 ISM2Q6H9L7 571 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 LRSAM1Q6UWE0 723 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 CATSPER4Q7RTX7 472 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 ADSSL1Q8N142 457 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 GLIS3Q8NEA6 775 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 TMEM40Q8WWA1 233 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 DHTKD1Q96HY7 919 aaPredicted RBP12.8□□□□□ -0.36
CDRT1-207ENST00000583965 MRPL4Q9BYD3 311 aaKnown RBP12.8□□□□□ -0.36
CDRT1-207ENST00000583965 PPP1R12CQ9BZL4 782 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 PRDM5Q9NQX1 630 aaPredicted RBP12.8□□□□□ -0.36
CDRT1-207ENST00000583965 CGNQ9P2M7 1197 aaKnown RBP12.8□□□□□ -0.36
CDRT1-207ENST00000583965 NOC2LQ9Y3T9 749 aaKnown RBP12.8□□□□□ -0.36
CDRT1-207ENST00000583965 CNTNAP2Q9UHC6 1331 aa12.8□□□□□ -0.36
CDRT1-207ENST00000583965 TTC3P53804 2025 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 TNRC18O15417 2968 aaPredicted RBP12.79□□□□□ -0.36
CDRT1-207ENST00000583965 TRIM43BA6NCK2 446 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 PRPF6O94906 941 aaKnown RBP12.79□□□□□ -0.36
CDRT1-207ENST00000583965 GHRP10912 638 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 CYP2C18P33260 490 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 PAK2Q13177 524 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 PRPF4BQ13523 1007 aaKnown RBP12.79□□□□□ -0.36
CDRT1-207ENST00000583965 LPIN1Q14693 890 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 AMHR2Q16671 573 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 ZPBP2Q6X784 338 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 FAM228AQ86W67 206 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 SMYD4Q8IYR2 804 aaPredicted RBP12.79□□□□□ -0.36
CDRT1-207ENST00000583965 C7orf61Q8IZ16 206 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 SYCP3Q8IZU3 236 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 GOLGA5Q8TBA6 731 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 TRIM43Q96BQ3 446 aaPredicted RBP12.79□□□□□ -0.36
CDRT1-207ENST00000583965 BICD1Q96G01 975 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 FUCA2Q9BTY2 467 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 GBP3Q9H0R5 595 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 WNT8AQ9H1J5 351 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 ERVK-5Q9HDB9 667 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 AGPAT5Q9NUQ2 364 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 UMODL1Q5DID0 1318 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 CEP290O15078 2479 aa12.79□□□□□ -0.36
CDRT1-207ENST00000583965 TDRD15B5MCY1 1934 aaKnown RBP12.78□□□□□ -0.36
CDRT1-207ENST00000583965 PPP1R3GB7ZBB8 358 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 PDXKO00764 312 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 HNRNPDLO14979 420 aaKnown RBP12.78□□□□□ -0.36
CDRT1-207ENST00000583965 N4BP3O15049 544 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 TSPAN1O60635 241 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 CSDE1O75534 798 aaKnown RBP12.78□□□□□ -0.36
CDRT1-207ENST00000583965 CXCL10P02778 98 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 LIG4P49917 911 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 CCL23P55773 120 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 KCNA1Q09470 495 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 MBTPS1Q14703 1052 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 DPCR1Q3MIW9 517 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 SLFN12LQ6IEE8 588 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 CENPPQ6IPU0 288 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 MFSD5Q6N075 450 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 NOTUMQ6P988 496 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 FOXR2Q6PJQ5 311 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 HS2ST1Q7LGA3 356 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 APBB1IPQ7Z5R6 666 aaPredicted RBP12.78□□□□□ -0.36
CDRT1-207ENST00000583965 NELFCDQ8IXH7 590 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 TMEM199Q8N511 208 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 DPF3Q92784 378 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 APBB2Q92870 758 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 CCDC51Q96ER9 411 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 ACO2Q99798 780 aaKnown RBP12.78□□□□□ -0.36
CDRT1-207ENST00000583965 IFIH1Q9BYX4 1025 aaKnown RBP12.78□□□□□ -0.36
CDRT1-207ENST00000583965 KCTD10Q9H3F6 313 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 AGO3Q9H9G7 860 aaKnown RBP12.78□□□□□ -0.36
CDRT1-207ENST00000583965 CHST12Q9NRB3 414 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 TYW1Q9NV66 732 aaKnown RBP12.78□□□□□ -0.36
CDRT1-207ENST00000583965 PADI3Q9ULW8 664 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 ST3GAL5Q9UNP4 418 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 MAPK8IP1Q9UQF2 711 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 TNFSF13BQ9Y275 285 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 ZMYM2Q9UBW7 1377 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 PDE4DIPQ5VU43 2346 aa12.78□□□□□ -0.36
CDRT1-207ENST00000583965 A0A1B0GUA9 196 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 BICDL2A1A5D9 508 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 CALUO43852 315 aaPredicted RBP12.77□□□□□ -0.37
CDRT1-207ENST00000583965 NBNO60934 754 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 TOM1L1O75674 476 aa12.77□□□□□ -0.37
CDRT1-207ENST00000583965 CAVIN2O95810 425 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms