RNA–Protein interactions for RNA: ENST00000583927.1

SKA2-208, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 533 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-208ENST00000583927 KCNT2Q6UVM3 1135 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 GLB1LQ6UWU2 654 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 HELQQ8TDG4 1101 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 SNX29Q8TEQ0 813 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 KIFAP3Q92845 792 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 ZNF558Q96NG5 402 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 MMTAG2Q9BU76 263 aaKnown RBP10.97□□□□□ -0.65
SKA2-208ENST00000583927 CSRNP2Q9H175 543 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 POLR3FQ9H1D9 316 aaPredicted RBP10.97□□□□□ -0.65
SKA2-208ENST00000583927 C2orf40Q9H1Z8 148 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 FZD8Q9H461 694 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 TLR9Q9NR96 1032 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 BMP2KQ9NSY1 1161 aaPredicted RBP10.97□□□□□ -0.65
SKA2-208ENST00000583927 PRMT7Q9NVM4 692 aaPredicted RBP10.97□□□□□ -0.65
SKA2-208ENST00000583927 KANSL3Q9P2N6 904 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 STK39Q9UEW8 545 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 KIAA1024Q9UPX6 916 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 DNM3Q9UQ16 869 aa10.97□□□□□ -0.65
SKA2-208ENST00000583927 PHLPP2Q6ZVD8 1323 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 A0A1B0GUA9 196 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 INO80B-WBP1J3KQ70 363 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 FSCN2O14926 492 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 ARF4P18085 180 aaPredicted RBP10.96□□□□□ -0.65
SKA2-208ENST00000583927 LTBRP36941 435 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 NAMPTP43490 491 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 HYAL1Q12794 435 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 NOMO2Q5JPE7 1267 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 SLC27A1Q6PCB7 646 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 AGMOQ6ZNB7 445 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 THNSL1Q8IYQ7 743 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 SLC39A11Q8N1S5 342 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 ADAMTS19Q8TE59 1207 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 MRPS27Q92552 414 aaKnown RBP10.96□□□□□ -0.65
SKA2-208ENST00000583927 SNX21Q969T3 373 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 CDCA3Q99618 268 aaPredicted RBP10.96□□□□□ -0.65
SKA2-208ENST00000583927 TIPINQ9BVW5 301 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 NT5C3AQ9H0P0 336 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 BHMT2Q9H2M3 363 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 C17orf75Q9HAS0 396 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 NGRNQ9NPE2 291 aaKnown RBP10.96□□□□□ -0.65
SKA2-208ENST00000583927 DDX19AQ9NUU7 478 aaKnown RBP10.96□□□□□ -0.65
SKA2-208ENST00000583927 TBC1D13Q9NVG8 400 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 SPG21Q9NZD8 308 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 KCND2Q9NZV8 630 aa10.96□□□□□ -0.65
SKA2-208ENST00000583927 PUF60Q9UHX1 559 aaKnown RBP10.96□□□□□ -0.65
SKA2-208ENST00000583927 MORC2Q9Y6X9 1032 aaPredicted RBP10.96□□□□□ -0.65
SKA2-208ENST00000583927 A0A087WWV3 80 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 MEIS3P2A8K0S8 358 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 K7ELQ4 463 aaPredicted RBP10.95□□□□□ -0.66
SKA2-208ENST00000583927 PDIA4P13667 645 aaKnown RBP10.95□□□□□ -0.66
SKA2-208ENST00000583927 ALDH7A1P49419 539 aaKnown RBP10.95□□□□□ -0.66
SKA2-208ENST00000583927 KCNQ1P51787 676 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 EFNA5P52803 228 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 BCAR1P56945 870 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 KRT17Q04695 432 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 ADAM15Q13444 863 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 ZBTB8OSQ8IWT0 167 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 EFHBQ8N7U6 833 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 RNF169Q8NCN4 708 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 SMG8Q8ND04 991 aaKnown RBP10.95□□□□□ -0.66
SKA2-208ENST00000583927 GADD45GIP1Q8TAE8 222 aaPredicted RBP10.95□□□□□ -0.66
SKA2-208ENST00000583927 URGCPQ8TCY9 931 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 KCNN1Q92952 543 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 UHRF1Q96T88 793 aaPredicted RBP10.95□□□□□ -0.66
SKA2-208ENST00000583927 CCDC113Q9H0I3 377 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 RSAD1Q9HA92 442 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 GPRC5CQ9NQ84 441 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 HCSTQ9UBK5 93 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 KCNG1Q9UIX4 513 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 GIT1Q9Y2X7 761 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 IPPQ9Y573 584 aa10.95□□□□□ -0.66
SKA2-208ENST00000583927 GRXCR2A6NFK2 248 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 LRRIQ4A6NIV6 560 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 ACKR2O00590 384 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 GALTP07902 379 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 SYT1P21579 422 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 IBSPP21815 317 aaPredicted RBP10.94□□□□□ -0.66
SKA2-208ENST00000583927 KCNA5P22460 613 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 GUCY2CP25092 1073 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 IRS1P35568 1242 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 ERVFC1P60507 584 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 KCNC3Q14003 757 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 MAPK6Q16659 721 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 TMEM184AQ6ZMB5 413 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 C1orf186Q6ZWK4 172 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 HACE1Q8IYU2 909 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 LPPQ93052 612 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 IFT74Q96LB3 600 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 DRC1Q96MC2 740 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 TMEM175Q9BSA9 504 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 NTPCRQ9BSD7 190 aaKnown RBP10.94□□□□□ -0.66
SKA2-208ENST00000583927 NRDE2Q9H7Z3 1164 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 FAM50BQ9Y247 325 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 IRAK3Q9Y616 596 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 TCHHQ07283 1943 aa10.94□□□□□ -0.66
SKA2-208ENST00000583927 VWA3AA6NCI4 1184 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 PP2D1A8MPX8 630 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 E9PMD0 336 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 TNFRSF10AO00220 468 aa10.93□□□□□ -0.66
SKA2-208ENST00000583927 N4BP3O15049 544 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms