RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 NFKBIZQ9BYH8 718 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 OSBPL7Q9BZF2 842 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 AGO3Q9H9G7 860 aaKnown RBP12.04□□□□□ -0.48
TOP3A-216ENST00000583804 CBX8Q9HC52 389 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 OLFML3Q9NRN5 406 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 PCDHB13Q9Y5F0 798 aa12.04□□□□□ -0.48
TOP3A-216ENST00000583804 GPR182O15218 404 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 NBNO60934 754 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 ERLIN2O94905 339 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 PRPF6O94906 941 aaKnown RBP12.03□□□□□ -0.48
TOP3A-216ENST00000583804 PRKCBP05771 671 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 SFPQP23246 707 aaKnown RBP eCLIP12.03□□□□□ -0.48
TOP3A-216ENST00000583804 ZNF165P49910 485 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 CASP5P51878 434 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 EHHADHQ08426 723 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 NCBP1Q09161 790 aaKnown RBP12.03□□□□□ -0.48
TOP3A-216ENST00000583804 STRN3Q13033 797 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 PAK2Q13177 524 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 HSP90AA4PQ58FG1 418 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 NT5DC1Q5TFE4 455 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 TSHZ1Q6ZSZ6 1077 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 FAM228AQ86W67 206 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 IFNLR1Q8IU57 520 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-216ENST00000583804 NELFCDQ8IXH7 590 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 TMEM199Q8N511 208 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 USP38Q8NB14 1042 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 BADQ92934 168 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 FIZ1Q96SL8 496 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 LBHD1Q9BQE6 289 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-216ENST00000583804 TMEM134Q9H6X4 195 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 PRMT7Q9NVM4 692 aaPredicted RBP12.03□□□□□ -0.48
TOP3A-216ENST00000583804 ARHGAP28Q9P2N2 729 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 TBX20Q9UMR3 447 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 ST3GAL5Q9UNP4 418 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 USP20Q9Y2K6 914 aa12.03□□□□□ -0.48
TOP3A-216ENST00000583804 TRIM49BA6NDI0 452 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 PARNO95453 639 aaKnown RBP12.02□□□□□ -0.48
TOP3A-216ENST00000583804 CSF2RAP15509 400 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 ABCD1P33897 745 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 PRCPP42785 496 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 GTF2BQ00403 316 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 PRPF4BQ13523 1007 aaKnown RBP12.02□□□□□ -0.48
TOP3A-216ENST00000583804 GPNMBQ14956 572 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 ZNF658Q5TYW1 1059 aaPredicted RBP12.02□□□□□ -0.48
TOP3A-216ENST00000583804 SYCP3Q8IZU3 236 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 BICD1Q96G01 975 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 ACCSQ96QU6 501 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 IFIH1Q9BYX4 1025 aaKnown RBP12.02□□□□□ -0.48
TOP3A-216ENST00000583804 IKZF4Q9H2S9 585 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 FZD8Q9H461 694 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 ST6GALNAC4Q9H4F1 302 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 PADI3Q9ULW8 664 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 SQORQ9Y6N5 450 aa12.02□□□□□ -0.48
TOP3A-216ENST00000583804 PHLPP2Q6ZVD8 1323 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 PPP1R3GB7ZBB8 358 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 ACKR2O00590 384 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 SCP2P22307 547 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 RFC2P35250 354 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 PLCB2Q00722 1185 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 ALCAMQ13740 583 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 TAS1R3Q7RTX0 852 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 RPUSD2Q8IZ73 545 aaKnown RBP12.02□□□□□ -0.49
TOP3A-216ENST00000583804 MYOCDQ8IZQ8 938 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 TRIML1Q8N9V2 468 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 DBF4BQ8NFT6 615 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 SCFD1Q8WVM8 642 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 NELFBQ8WX92 580 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 SEPT8Q92599 483 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 CPB2Q96IY4 423 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 TARS2Q9BW92 718 aaKnown RBP12.02□□□□□ -0.49
TOP3A-216ENST00000583804 MRPL4Q9BYD3 311 aaKnown RBP12.02□□□□□ -0.49
TOP3A-216ENST00000583804 CCDC113Q9H0I3 377 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 ERVK-5Q9HDB9 667 aa12.02□□□□□ -0.49
TOP3A-216ENST00000583804 PIN4Q9Y237 131 aaKnown RBP12.02□□□□□ -0.49
TOP3A-216ENST00000583804 MYH11P35749 1972 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 ALPK3Q96L96 1907 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 EIF3DO15371 548 aaKnown RBP eCLIP12.01□□□□□ -0.49
TOP3A-216ENST00000583804 TNRC18O15417 2968 aaPredicted RBP12.01□□□□□ -0.49
TOP3A-216ENST00000583804 B4GALT5O43286 388 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 TSPAN1O60635 241 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 PPP1R37O75864 691 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 ACRP10323 421 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 PMS1P54277 932 aaKnown RBP12.01□□□□□ -0.49
TOP3A-216ENST00000583804 FPGSQ05932 587 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 KCNA1Q09470 495 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 PCBP1Q15365 356 aaKnown RBP eCLIP12.01□□□□□ -0.49
TOP3A-216ENST00000583804 AMHR2Q16671 573 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 FAM187BQ17R55 369 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 PLEKHG4Q58EX7 1191 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 EPM2AIP1Q7L775 607 aaPredicted RBP12.01□□□□□ -0.49
TOP3A-216ENST00000583804 DHX40Q8IX18 779 aaKnown RBP12.01□□□□□ -0.49
TOP3A-216ENST00000583804 ZNF507Q8TCN5 953 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 FAM200AQ8TCP9 573 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 HVCN1Q96D96 273 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 EEF2KMTQ96G04 330 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 PRIMPOLQ96LW4 560 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 PPP1R9BQ96SB3 815 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 TCHPQ9BT92 498 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 STRA6Q9BX79 667 aa12.01□□□□□ -0.49
TOP3A-216ENST00000583804 GTPBP4Q9BZE4 634 aaKnown RBP12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms