RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 TMX1Q9H3N1 280 aa14.35□□□□□ -0.11
ERBB2-215ENST00000583391 OLFML3Q9NRN5 406 aa14.35□□□□□ -0.11
ERBB2-215ENST00000583391 AGPAT5Q9NUQ2 364 aa14.35□□□□□ -0.11
ERBB2-215ENST00000583391 HOOK1Q9UJC3 728 aaKnown RBP14.35□□□□□ -0.11
ERBB2-215ENST00000583391 CNTNAP2Q9UHC6 1331 aa14.35□□□□□ -0.11
ERBB2-215ENST00000583391 PVALEFA0A1B0GWK0 134 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 H0YCG3 227 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 K7ERI5 159 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 GCNT3O95395 438 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 MBD3O95983 291 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 FGBP02675 491 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 MYBP10242 640 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 IBSPP21815 317 aaPredicted RBP14.34□□□□□ -0.11
ERBB2-215ENST00000583391 CASP5P51878 434 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 CAMK4Q16566 473 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 ZC2HC1CQ53FD0 456 aaPredicted RBP14.34□□□□□ -0.11
ERBB2-215ENST00000583391 C9orf50Q5SZB4 431 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 CHRDL2Q6WN34 429 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 PPP4R3CPQ6ZMV5 832 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 GLIS3Q8NEA6 775 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 CCDC47Q96A33 483 aaKnown RBP14.34□□□□□ -0.11
ERBB2-215ENST00000583391 TMEM134Q9H6X4 195 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 KCNG1Q9UIX4 513 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 USP20Q9Y2K6 914 aa14.34□□□□□ -0.11
ERBB2-215ENST00000583391 TTLL13PA6NNM8 815 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 ARF4P18085 180 aaPredicted RBP14.33□□□□□ -0.12
ERBB2-215ENST00000583391 EHHADHQ08426 723 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 STRN3Q13033 797 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 PRPF4BQ13523 1007 aaKnown RBP14.33□□□□□ -0.12
ERBB2-215ENST00000583391 IKBKEQ14164 716 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 FAM187BQ17R55 369 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 TWF2Q6IBS0 349 aaKnown RBP14.33□□□□□ -0.12
ERBB2-215ENST00000583391 CDR2LQ86X02 465 aaPredicted RBP14.33□□□□□ -0.12
ERBB2-215ENST00000583391 SLC17A8Q8NDX2 589 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 SMARCE1Q969G3 411 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 BICD1Q96G01 975 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 PRIMPOLQ96LW4 560 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 NTPCRQ9BSD7 190 aaKnown RBP14.33□□□□□ -0.12
ERBB2-215ENST00000583391 FTHL17Q9BXU8 183 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 NUP62CLQ9H1M0 184 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 FZD8Q9H461 694 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 CLSTN2Q9H4D0 955 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 SLC39A2Q9NP94 309 aa14.33□□□□□ -0.12
ERBB2-215ENST00000583391 ACKR2O00590 384 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 PPP1R37O75864 691 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 BAIAP3O94812 1187 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 SMC2O95347 1197 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 ZSCAN20P17040 1043 aaPredicted RBP14.32□□□□□ -0.12
ERBB2-215ENST00000583391 KCNJ6P48051 423 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 WDR5P61964 334 aaKnown RBP14.32□□□□□ -0.12
ERBB2-215ENST00000583391 GTF2BQ00403 316 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 DSC3Q14574 896 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 PCBP1Q15365 356 aaKnown RBP eCLIP14.32□□□□□ -0.12
ERBB2-215ENST00000583391 NOTUMQ6P988 496 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 ZNF720Q7Z2F6 126 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 HVCN1Q96D96 273 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 RNPC3Q96LT9 517 aaKnown RBP14.32□□□□□ -0.12
ERBB2-215ENST00000583391 ADAM2Q99965 735 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 MRPL4Q9BYD3 311 aaKnown RBP14.32□□□□□ -0.12
ERBB2-215ENST00000583391 ST6GALNAC4Q9H4F1 302 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 CXXC1Q9P0U4 656 aaPredicted RBP14.32□□□□□ -0.12
ERBB2-215ENST00000583391 TBX20Q9UMR3 447 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 PCDHA5Q9Y5H7 936 aa14.32□□□□□ -0.12
ERBB2-215ENST00000583391 ABHD14A-ACY1A0A1B0GW23 586 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.31□□□□□ -0.12
ERBB2-215ENST00000583391 HNRNPDLO14979 420 aaKnown RBP14.31□□□□□ -0.12
ERBB2-215ENST00000583391 EFCAB14O75071 495 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 PRPF6O94906 941 aaKnown RBP14.31□□□□□ -0.12
ERBB2-215ENST00000583391 RHOBTB3O94955 611 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 SCP2P22307 547 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 AXLP30530 894 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 DEFB103AP81534 67 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 NCBP1Q09161 790 aaKnown RBP14.31□□□□□ -0.12
ERBB2-215ENST00000583391 KCNB1Q14721 858 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 SHHQ15465 462 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 L1TD1Q5T7N2 865 aaKnown RBP14.31□□□□□ -0.12
ERBB2-215ENST00000583391 NT5DC1Q5TFE4 455 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 ATF7IP2Q5U623 682 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.31□□□□□ -0.12
ERBB2-215ENST00000583391 STXBP4Q6ZWJ1 553 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 MAP4K3Q8IVH8 894 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 ELOA2Q8IYF1 753 aaPredicted RBP14.31□□□□□ -0.12
ERBB2-215ENST00000583391 MYOCDQ8IZQ8 938 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 KIAA0895Q8NCT3 520 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 HERVK_113Q902F9 699 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 TARS2Q9BW92 718 aaKnown RBP14.31□□□□□ -0.12
ERBB2-215ENST00000583391 TSPYL2Q9H2G4 693 aaPredicted RBP14.31□□□□□ -0.12
ERBB2-215ENST00000583391 MTIF3Q9H2K0 278 aaKnown RBP14.31□□□□□ -0.12
ERBB2-215ENST00000583391 PDZD7Q9H5P4 517 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 RMND1Q9NWS8 449 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 ANKFY1Q9P2R3 1169 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 GDAQ9Y2T3 454 aa14.31□□□□□ -0.12
ERBB2-215ENST00000583391 COL4A6Q14031 1691 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 BIN1O00499 593 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 N4BP3O15049 544 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 EIF3DO15371 548 aaKnown RBP eCLIP14.3□□□□□ -0.12
ERBB2-215ENST00000583391 NPTXRO95502 500 aa14.3□□□□□ -0.12
ERBB2-215ENST00000583391 HARSP12081 509 aaKnown RBP14.3□□□□□ -0.12
ERBB2-215ENST00000583391 HOXA11P31270 313 aaPredicted RBP14.3□□□□□ -0.12
ERBB2-215ENST00000583391 ABCD1P33897 745 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms