RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 ARHGAP8P85298 464 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 PTH1RQ03431 593 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 ZNF528Q3MIS6 628 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 LONRF3Q496Y0 759 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 CASC1Q6TDU7 716 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 NYAP1Q6ZVC0 841 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 PLA2G4DQ86XP0 818 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 TEX2Q8IWB9 1127 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 SMC5Q8IY18 1101 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 MB21D2Q8IYB1 491 aaPredicted RBP8.61□□□□□ -1.03
CCDC47-205ENST00000582331 MAML2Q8IZL2 1156 aaPredicted RBP8.61□□□□□ -1.03
CCDC47-205ENST00000582331 LINC01465Q8N7H1 131 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 PJA1Q8NG27 643 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 LPPQ93052 612 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 SHDQ96IW2 340 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 CCDC136Q96JN2 1154 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 VN1R3Q9BXE9 311 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 ANO3Q9BYT9 981 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 RHOBTB2Q9BYZ6 727 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 GBP3Q9H0R5 595 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 RIC8AQ9NPQ8 531 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 MAN1C1Q9NR34 630 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 MRPL17Q9NRX2 175 aaKnown RBP8.61□□□□□ -1.03
CCDC47-205ENST00000582331 TBC1D13Q9NVG8 400 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 DNAJB4Q9UDY4 337 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 DPP7Q9UHL4 492 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 CDV3Q9UKY7 258 aaKnown RBP8.61□□□□□ -1.03
CCDC47-205ENST00000582331 INPP5FQ9Y2H2 1132 aa8.61□□□□□ -1.03
CCDC47-205ENST00000582331 NCOR2Q9Y618 2525 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 CLUHO75153 1309 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 IPO5O00410 1097 aaKnown RBP8.6□□□□□ -1.03
CCDC47-205ENST00000582331 SPTLC1O15269 473 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 INPPL1O15357 1258 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 LAMTOR5O43504 91 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 CSDE1O75534 798 aaKnown RBP8.6□□□□□ -1.03
CCDC47-205ENST00000582331 OFD1O75665 1012 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 LAMP2P13473 410 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 GLULP15104 373 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 SREBF1P36956 1147 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 NAPAP54920 295 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 STARD6P59095 220 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 LMNB2Q03252 620 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 TWF2Q6IBS0 349 aaKnown RBP8.6□□□□□ -1.03
CCDC47-205ENST00000582331 ZNF746Q6NUN9 644 aaPredicted RBP8.6□□□□□ -1.03
CCDC47-205ENST00000582331 SMAP1Q8IYB5 467 aaPredicted RBP8.6□□□□□ -1.03
CCDC47-205ENST00000582331 NLRP7Q8WX94 980 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 RUFY2Q8WXA3 655 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 ATRIPQ8WXE1 791 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 SMG7Q92540 1137 aaKnown RBP8.6□□□□□ -1.03
CCDC47-205ENST00000582331 CHAMP1Q96JM3 812 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 FAM167AQ96KS9 214 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 ZNF577Q9BSK1 485 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 RTKNQ9BST9 563 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 MTA3Q9BTC8 594 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 TRAIPQ9BWF2 469 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 BCO2Q9BYV7 579 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 GCOM2Q9BZD3 368 aaPredicted RBP8.6□□□□□ -1.03
CCDC47-205ENST00000582331 FOXQ1Q9C009 403 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 PIDD1Q9HB75 910 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 SLC2A4RGQ9NR83 387 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 NRBP2Q9NSY0 501 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 TBC1D22BQ9NU19 505 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 SPATA6Q9NWH7 488 aaPredicted RBP8.6□□□□□ -1.03
CCDC47-205ENST00000582331 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCDC47-205ENST00000582331 GABBR1Q9UBS5 961 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 TCEAL9Q9UHQ7 104 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 FBXO4Q9UKT5 387 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 SSX2IPQ9Y2D8 614 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 PCDHA10Q9Y5I2 948 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 EPG5Q9HCE0 2579 aa8.6□□□□□ -1.03
CCDC47-205ENST00000582331 FANCMQ8IYD8 2048 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 C2orf16Q68DN1 1984 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 DCDC2BA2VCK2 349 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 ANHXE9PGG2 379 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 FAM86B1E9PN63 330 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 C2CD2LO14523 706 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 PRC1O43663 620 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 ZNF623O75123 536 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 LRRN2O75325 713 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 RFPL2O75678 378 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 URODP06132 367 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 ADH1AP07327 375 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 FAM86B2P0C5J1 330 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 MYBP10242 640 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 ADCY7P51828 1080 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 AK2P54819 239 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 PRSS12P56730 875 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 CDC42EP1Q00587 391 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 NUCB1Q02818 461 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 AP3B2Q13367 1082 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 WWC2Q6AWC2 1192 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 TMTC3Q6ZXV5 915 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 ZNF280BQ86YH2 543 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 RAB11FIP4Q86YS3 637 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 FANCBQ8NB91 859 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 URGCPQ8TCY9 931 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 PGBD4Q96DM1 585 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 TMEM87BQ96K49 555 aa8.59□□□□□ -1.03
CCDC47-205ENST00000582331 FAM193BQ96PV7 902 aaPredicted RBP8.59□□□□□ -1.03
CCDC47-205ENST00000582331 RPS6KC1Q96S38 1066 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms