RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 ST6GALNAC4Q9H4F1 302 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 SMARCAD1Q9H4L7 1026 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 VTA1Q9NP79 307 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 AGPAT3Q9NRZ7 376 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 AGPAT5Q9NUQ2 364 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 CEP72Q9P209 647 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 DDX41Q9UJV9 622 aaKnown RBP10.13□□□□□ -0.79
SS18-220ENST00000582092 TBX20Q9UMR3 447 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 MAFBQ9Y5Q3 323 aaPredicted RBP10.13□□□□□ -0.79
SS18-220ENST00000582092 MYH11P35749 1972 aa10.13□□□□□ -0.79
SS18-220ENST00000582092 IGSF9BQ9UPX0 1349 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 KIAA1217Q5T5P2 1943 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 LRRIQ4A6NIV6 560 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 TGFB1I1O43294 461 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 GAS2O43903 313 aaKnown RBP10.12□□□□□ -0.79
SS18-220ENST00000582092 ZNF862O60290 1169 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 ZEB2O60315 1214 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 AKAP3O75969 853 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 GH1P01241 217 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 CCDC172P0C7W6 258 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 HOXD13P35453 343 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 NPTX2P47972 431 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 KLK7P49862 253 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 LIG4P49917 911 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 MNX1P50219 401 aaPredicted RBP10.12□□□□□ -0.79
SS18-220ENST00000582092 NCKAP1LP55160 1127 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 POLR2FP61218 127 aaKnown RBP10.12□□□□□ -0.79
SS18-220ENST00000582092 KCNA1Q09470 495 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 ASIC2Q16515 512 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 TMEM132AQ24JP5 1023 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 TDRD12Q587J7 1177 aaKnown RBP10.12□□□□□ -0.79
SS18-220ENST00000582092 SYT10Q6XYQ8 523 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 TOGARAM2Q6ZUX3 1019 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 VPS36Q86VN1 386 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 TMEM139Q8IV31 216 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 SLC9A9Q8IVB4 645 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 FBXO16Q8IX29 292 aaPredicted RBP10.12□□□□□ -0.79
SS18-220ENST00000582092 DAW1Q8N136 415 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 BBXQ8WY36 941 aaPredicted RBP10.12□□□□□ -0.79
SS18-220ENST00000582092 CRACR2AQ9BSW2 395 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 DESI2Q9BSY9 194 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 NIFKQ9BYG3 293 aaKnown RBP10.12□□□□□ -0.79
SS18-220ENST00000582092 TSGA10Q9BZW7 698 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 PCIF1Q9H4Z3 704 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 NHEJ1Q9H9Q4 299 aaPredicted RBP10.12□□□□□ -0.79
SS18-220ENST00000582092 NLRC4Q9NPP4 1024 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 GPRC5CQ9NQ84 441 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 DNAI1Q9UI46 699 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 TRPC6Q9Y210 931 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 SIK3Q9Y2K2 1263 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 ADGRG1Q9Y653 693 aa10.12□□□□□ -0.79
SS18-220ENST00000582092 UQCRHLA0A096LP55 91 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 GSTTP1A0A1W2PQM5 241 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 MOXD2PA6NHM9 499 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 K7ERI5 159 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 KRT86O43790 486 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 NDUFA10O95299 355 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 UQCRHP07919 91 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 C6orf222P0C671 652 aaPredicted RBP10.11□□□□□ -0.79
SS18-220ENST00000582092 SLC26A2P50443 739 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 VAMP7P51809 220 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 ETF1P62495 437 aaKnown RBP10.11□□□□□ -0.79
SS18-220ENST00000582092 CDK17Q00537 523 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 TNFAIP2Q03169 654 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 RAPGEF1Q13905 1077 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 TFDP1Q14186 410 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 BRDTQ58F21 947 aaPredicted RBP10.11□□□□□ -0.79
SS18-220ENST00000582092 IER5Q5VY09 327 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 IQSEC1Q6DN90 963 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 SLFN12LQ6IEE8 588 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 PDXDC1Q6P996 788 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 RAD9BQ6WBX8 426 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 NYAP1Q6ZVC0 841 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 PLPPR4Q7Z2D5 763 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 REXO1L1PQ8IX06 675 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 EHBP1Q8NDI1 1231 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 AFAP1L1Q8TED9 768 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 POMGNT1Q8WZA1 660 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 VTI1AQ96AJ9 217 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 LBHD1Q9BQE6 289 aaPredicted RBP10.11□□□□□ -0.79
SS18-220ENST00000582092 AP5M1Q9H0R1 490 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 BCAS3Q9H6U6 928 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 SUGCTQ9HAC7 445 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 KIAA1586Q9HCI6 787 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 LZTFL1Q9NQ48 299 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 HSPBP1Q9NZL4 362 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 DAAM1Q9Y4D1 1078 aa10.11□□□□□ -0.79
SS18-220ENST00000582092 BZW2Q9Y6E2 419 aaKnown RBP10.11□□□□□ -0.79
SS18-220ENST00000582092 PHLPP2Q6ZVD8 1323 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 MYH9P35579 1960 aaKnown RBP10.1□□□□□ -0.79
SS18-220ENST00000582092 LCTP09848 1927 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 A0A1W2PPC1 479 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 GTPBP10A4D1E9 387 aaKnown RBP10.1□□□□□ -0.79
SS18-220ENST00000582092 LRRC53A6NM62 1247 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 HNRNPDLO14979 420 aaKnown RBP10.1□□□□□ -0.79
SS18-220ENST00000582092 KIAA0391O15091 583 aaKnown RBP10.1□□□□□ -0.79
SS18-220ENST00000582092 MAPK13O15264 365 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 HBP1O60381 514 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 PPP1R37O75864 691 aa10.1□□□□□ -0.79
SS18-220ENST00000582092 PGK1P00558 417 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms