RNA–Protein interactions for RNA: ENST00000581160.5

CDK5RAP3-220, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 490 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-220ENST00000581160 RWDD2AQ9UIY3 292 aa10.06□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TRAF3IP3Q9Y228 551 aa10.06□□□□□ -0.8
CDK5RAP3-220ENST00000581160 GINS2Q9Y248 185 aa10.06□□□□□ -0.8
CDK5RAP3-220ENST00000581160 ATP11BQ9Y2G3 1177 aa10.06□□□□□ -0.8
CDK5RAP3-220ENST00000581160 BICDL2A1A5D9 508 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 INO80B-WBP1J3KQ70 363 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 PITPNM1O00562 1244 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TGFB1I1O43294 461 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 CALUO43852 315 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 PRKCBP05771 671 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 IQCF3P0C7M6 154 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 SELPP16109 830 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 NCBP1Q09161 790 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 PAK1Q13153 545 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 NFIL3Q16649 462 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 AMHR2Q16671 573 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 KLHL10Q6JEL2 608 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 ZPBP2Q6X784 338 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TSHZ1Q6ZSZ6 1077 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 FAM43BQ6ZT52 329 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 C11orf57Q6ZUT1 292 aaPredicted RBP10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 USP38Q8NB14 1042 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 GOLGA5Q8TBA6 731 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 ENOX1Q8TC92 643 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TMEM174Q8WUU8 243 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TMEM40Q8WWA1 233 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 MED15Q96RN5 788 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 ACO2Q99798 780 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 NOC4LQ9BVI4 516 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 MRPL4Q9BYD3 311 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 GBP3Q9H0R5 595 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TMEM39AQ9NV64 488 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TYW1Q9NV66 732 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TBX21Q9UL17 535 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 NOC2LQ9Y3T9 749 aaKnown RBP10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 STYXL1Q9Y6J8 313 aa10.05□□□□□ -0.8
CDK5RAP3-220ENST00000581160 CCDC85CA6NKD9 419 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 SMTNL1A8MU46 457 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 ANKRD63C9JTQ0 380 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 KIAA0355O15063 1070 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 GPR182O15218 404 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 CSDE1O75534 798 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 RPS6KA5O75582 802 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 PARNO95453 639 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 EDN1P05305 212 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 CLTBP09497 229 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 CTSHP09668 335 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 SFPQP23246 707 aaKnown RBP eCLIP10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 AXLP30530 894 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 ZNF165P49910 485 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 STX17P56962 302 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 LRRC63Q05C16 580 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 PRPF4BQ13523 1007 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 MYBPC2Q14324 1141 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 LPIN1Q14693 890 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 IQCB1Q15051 598 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 EDRF1Q3B7T1 1238 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 ZCWPW2Q504Y3 356 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 FBXO47Q5MNV8 452 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 SPATA1Q5VX52 437 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 SLFN12LQ6IEE8 588 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TTI2Q6NXR4 508 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 LRRC8DQ7L1W4 858 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 CATSPER4Q7RTX7 472 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 C12orf56Q8IXR9 622 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TSG101Q99816 390 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 DUSP9Q99956 384 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TARS2Q9BW92 718 aaKnown RBP10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 HIPK3Q9H422 1215 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 PTPRHQ9HD43 1115 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 DMAC2Q9NW81 257 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 CTNND2Q9UQB3 1225 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TNFSF13BQ9Y275 285 aa10.04□□□□□ -0.8
CDK5RAP3-220ENST00000581160 ZMYM2Q9UBW7 1377 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 A0A1B0GUA9 196 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TTLL13PA6NNM8 815 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 IKBKBO14920 756 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 KIAA0391O15091 583 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TSPAN1O60635 241 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TOM1L1O75674 476 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 ERLIN2O94905 339 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 FGFR1OPO95684 399 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 ARF4P18085 180 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 GARTP22102 1010 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 FGFR4P22455 802 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 PROZP22891 400 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 RPL13P26373 211 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 HOXA11P31270 313 aaPredicted RBP10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 CENPFP49454 3210 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 LIG4P49917 911 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 PMS1P54277 932 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 FKBP3Q00688 224 aaKnown RBP10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 ADAM9Q13443 819 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 ATF7IP2Q5U623 682 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 SLC39A4Q6P5W5 647 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 HS2ST1Q7LGA3 356 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 FAM228AQ86W67 206 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 GAS2L3Q86XJ1 694 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 SLC9A9Q8IVB4 645 aa10.03□□□□□ -0.8
CDK5RAP3-220ENST00000581160 TNS4Q8IZW8 715 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms