RNA–Protein interactions for RNA: ENST00000580498.5

SMG8-204, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 5

Gene SMG8, Length 785 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-204ENST00000580498 BCAR1P56945 870 aa22.3■■□□□ 1.16
SMG8-204ENST00000580498 NBR1Q14596 966 aa22.3■■□□□ 1.16
SMG8-204ENST00000580498 COL19A1Q14993 1142 aa22.3■■□□□ 1.16
SMG8-204ENST00000580498 LONRF3Q496Y0 759 aa22.3■■□□□ 1.16
SMG8-204ENST00000580498 LRRC55Q6ZSA7 311 aa22.3■■□□□ 1.16
SMG8-204ENST00000580498 APBB1IPQ7Z5R6 666 aaPredicted RBP22.3■■□□□ 1.16
SMG8-204ENST00000580498 EFHBQ8N7U6 833 aa22.3■■□□□ 1.16
SMG8-204ENST00000580498 DEPTORQ8TB45 409 aa22.3■■□□□ 1.16
SMG8-204ENST00000580498 LPPQ93052 612 aa22.3■■□□□ 1.16
SMG8-204ENST00000580498 PRIMPOLQ96LW4 560 aa22.3■■□□□ 1.16
SMG8-204ENST00000580498 CSRNP2Q9H175 543 aa22.3■■□□□ 1.16
SMG8-204ENST00000580498 MINDY3Q9H8M7 445 aa22.3■■□□□ 1.16
SMG8-204ENST00000580498 GRXCR2A6NFK2 248 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 TSPAN1O60635 241 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 BMP15O95972 392 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 CYP11B2P19099 503 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 NCLP19338 710 aaKnown RBP22.29■■□□□ 1.16
SMG8-204ENST00000580498 DNAJB1P25685 340 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 SSTR3P32745 418 aaPredicted RBP22.29■■□□□ 1.16
SMG8-204ENST00000580498 CAMK1Q14012 370 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 GIT2Q14161 759 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 SMC1AQ14683 1233 aaKnown RBP22.29■■□□□ 1.16
SMG8-204ENST00000580498 CTC1Q2NKJ3 1217 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 PLPP4Q5VZY2 271 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 MRPL10Q7Z7H8 261 aaKnown RBP22.29■■□□□ 1.16
SMG8-204ENST00000580498 RBM23Q86U06 439 aaKnown RBP22.29■■□□□ 1.16
SMG8-204ENST00000580498 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.29■■□□□ 1.16
SMG8-204ENST00000580498 KIFAP3Q92845 792 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 CDK5RAP3Q96JB5 506 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 POP1Q99575 1024 aaKnown RBP22.29■■□□□ 1.16
SMG8-204ENST00000580498 HCSTQ9UBK5 93 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 CD207Q9UJ71 328 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 KIAA1024Q9UPX6 916 aa22.29■■□□□ 1.16
SMG8-204ENST00000580498 NCOR1O75376 2440 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 OFD1O75665 1012 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 IRS1P35568 1242 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 TOB1P50616 345 aaPredicted RBP22.28■■□□□ 1.16
SMG8-204ENST00000580498 MBTD1Q05BQ5 628 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 ADAM15Q13444 863 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 MAPK6Q16659 721 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 SLC39A11Q8N1S5 342 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 KCTD17Q8N5Z5 321 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 C4orf32Q8N8J7 132 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 IGSF22Q8N9C0 903 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 NECAB3Q96P71 396 aaPredicted RBP22.28■■□□□ 1.16
SMG8-204ENST00000580498 ADPGKQ9BRR6 497 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 GBP3Q9H0R5 595 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 BHMT2Q9H2M3 363 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 EIF4ENIF1Q9NRA8 985 aaKnown RBP22.28■■□□□ 1.16
SMG8-204ENST00000580498 DDX19AQ9NUU7 478 aaKnown RBP22.28■■□□□ 1.16
SMG8-204ENST00000580498 TBC1D13Q9NVG8 400 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 PRKAG3Q9UGI9 489 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 PHLPP2Q6ZVD8 1323 aa22.28■■□□□ 1.16
SMG8-204ENST00000580498 A0A087WWV3 80 aa22.27■■□□□ 1.16
SMG8-204ENST00000580498 HOXA11P31270 313 aaPredicted RBP22.27■■□□□ 1.16
SMG8-204ENST00000580498 NAMPTP43490 491 aa22.27■■□□□ 1.16
SMG8-204ENST00000580498 SMAD4Q13485 552 aaKnown RBP22.27■■□□□ 1.16
SMG8-204ENST00000580498 SLC27A1Q6PCB7 646 aa22.27■■□□□ 1.16
SMG8-204ENST00000580498 BRAPQ7Z569 592 aa22.27■■□□□ 1.16
SMG8-204ENST00000580498 CPB2Q96IY4 423 aa22.27■■□□□ 1.16
SMG8-204ENST00000580498 NT5C3AQ9H0P0 336 aa22.27■■□□□ 1.16
SMG8-204ENST00000580498 ATG2AQ2TAZ0 1938 aa22.27■■□□□ 1.16
SMG8-204ENST00000580498 N4BP3O15049 544 aa22.26■■□□□ 1.15
SMG8-204ENST00000580498 CD2BP2O95400 341 aaKnown RBP22.26■■□□□ 1.15
SMG8-204ENST00000580498 ALDH2P05091 517 aa22.26■■□□□ 1.15
SMG8-204ENST00000580498 EFNA5P52803 228 aa22.26■■□□□ 1.15
SMG8-204ENST00000580498 ARL6IP4Q66PJ3 421 aaKnown RBP22.26■■□□□ 1.15
SMG8-204ENST00000580498 ADGRD2Q7Z7M1 963 aa22.26■■□□□ 1.15
SMG8-204ENST00000580498 TMEM175Q9BSA9 504 aa22.26■■□□□ 1.15
SMG8-204ENST00000580498 GPRC5CQ9NQ84 441 aa22.26■■□□□ 1.15
SMG8-204ENST00000580498 KCNG1Q9UIX4 513 aa22.26■■□□□ 1.15
SMG8-204ENST00000580498 IPPQ9Y573 584 aa22.26■■□□□ 1.15
SMG8-204ENST00000580498 FSCN2O14926 492 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 IL9P15248 144 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 ARF4P18085 180 aaPredicted RBP22.25■■□□□ 1.15
SMG8-204ENST00000580498 PBX3P40426 434 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 ERVFC1P60507 584 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 ATP2C1P98194 919 aaPredicted RBP22.25■■□□□ 1.15
SMG8-204ENST00000580498 ZRSR1Q15695 479 aaKnown RBP22.25■■□□□ 1.15
SMG8-204ENST00000580498 CLUL1Q15846 466 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 DUSP6Q16828 381 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 PPP4R3CPQ6ZMV5 832 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 AGMOQ6ZNB7 445 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 FAM178BQ8IXR5 827 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 DRC1Q96MC2 740 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 RPS6KC1Q96S38 1066 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 TIPINQ9BVW5 301 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 C1QTNF1Q9BXJ1 281 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 NRDE2Q9H7Z3 1164 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 FAN1Q9Y2M0 1017 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 GIT1Q9Y2X7 761 aa22.25■■□□□ 1.15
SMG8-204ENST00000580498 VPS37CA5D8V6 355 aaPredicted RBP22.24■■□□□ 1.15
SMG8-204ENST00000580498 EYA4O95677 639 aa22.24■■□□□ 1.15
SMG8-204ENST00000580498 GTF2F1P35269 517 aaKnown RBP eCLIP22.24■■□□□ 1.15
SMG8-204ENST00000580498 PRPF4BQ13523 1007 aaKnown RBP22.24■■□□□ 1.15
SMG8-204ENST00000580498 UBXN11Q5T124 520 aa22.24■■□□□ 1.15
SMG8-204ENST00000580498 CDCA2Q69YH5 1023 aaPredicted RBP22.24■■□□□ 1.15
SMG8-204ENST00000580498 GJD3Q8N144 294 aa22.24■■□□□ 1.15
SMG8-204ENST00000580498 VPS52Q8N1B4 723 aa22.24■■□□□ 1.15
SMG8-204ENST00000580498 IGSF21Q96ID5 467 aa22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms