RNA–Protein interactions for RNA: ENST00000579483.1

MSI2-209, Transcript of musashi RNA binding protein 2, humanhuman

TSL 1 (best)

Gene MSI2, Length 5,141 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-209ENST00000579483 FAM133AQ8N9E0 248 aa10.93□□□□□ -0.66
MSI2-209ENST00000579483 PHF20Q9BVI0 1012 aa10.93□□□□□ -0.66
MSI2-209ENST00000579483 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP10.93□□□□□ -0.66
MSI2-209ENST00000579483 ABCC6O95255 1503 aa10.93□□□□□ -0.66
MSI2-209ENST00000579483 ADGRB2O60241 1585 aa10.93□□□□□ -0.66
MSI2-209ENST00000579483 SLC16A3O15427 465 aaKnown RBP10.92□□□□□ -0.66
MSI2-209ENST00000579483 SGSM1Q2NKQ1 1148 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 TXNRD3Q86VQ6 643 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 ACER1Q8TDN7 264 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 TMEM39AQ9NV64 488 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 TUBE1Q9UJT0 475 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 UBQLN1Q9UMX0 589 aaKnown RBP10.92□□□□□ -0.66
MSI2-209ENST00000579483 HMGB1P1B2RPK0 211 aaPredicted RBP10.92□□□□□ -0.66
MSI2-209ENST00000579483 BUB1O43683 1085 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 CPP00450 1065 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 CLTAP09496 248 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 KLRK1P26718 216 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 TSTA3Q13630 321 aaPredicted RBP10.92□□□□□ -0.66
MSI2-209ENST00000579483 OXER1Q8TDS5 423 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 SCYL1Q96KG9 808 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 XPNPEP3Q9NQH7 507 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 CEP72Q9P209 647 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 MID2Q9UJV3 735 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 DIS3Q9Y2L1 958 aaKnown RBP10.92□□□□□ -0.66
MSI2-209ENST00000579483 TACC3Q9Y6A5 838 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 GOLGA8QA0A0J9YX86 632 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 GOLGA8OA6NCC3 632 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 GOLGA8NF8WBI6 632 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 EGFRP00533 1210 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 CASP14P31944 242 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 ACTR2P61160 394 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 CNPY4Q8N129 248 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 PBKQ96KB5 322 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 SLITRK1Q96PX8 696 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 PSMB7Q99436 277 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 TMEM63CQ9P1W3 806 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 MAGED2Q9UNF1 606 aaPredicted RBP10.92□□□□□ -0.66
MSI2-209ENST00000579483 AGAP1Q9UPQ3 857 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 CA12O43570 354 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 URODP06132 367 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 PMLP29590 882 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 KCNB1Q14721 858 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 TCP11X2Q5H9J9 407 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 CYP4A22Q5TCH4 519 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 IQSEC1Q6DN90 963 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 FRMD5Q7Z6J6 570 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 SMYD4Q8IYR2 804 aaPredicted RBP10.92□□□□□ -0.66
MSI2-209ENST00000579483 TMEM143Q96AN5 459 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 VPS39Q96JC1 886 aa10.92□□□□□ -0.66
MSI2-209ENST00000579483 POLR3CQ9BUI4 534 aaPredicted RBP10.92□□□□□ -0.66
MSI2-209ENST00000579483 EPB41L4AQ9HCS5 686 aaPredicted RBP10.92□□□□□ -0.66
MSI2-209ENST00000579483 ZFXP17010 805 aaPredicted RBP10.91□□□□□ -0.66
MSI2-209ENST00000579483 YWHAGP61981 247 aaKnown RBP eCLIP10.91□□□□□ -0.66
MSI2-209ENST00000579483 PDE1BQ01064 536 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 IQCB1Q15051 598 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 METTL7BQ6UX53 244 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 MAGOHBQ96A72 148 aaKnown RBP10.91□□□□□ -0.66
MSI2-209ENST00000579483 MED15Q96RN5 788 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 EDEM3Q9BZQ6 932 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 WDR35Q9P2L0 1181 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 SH3BP1Q9Y3L3 701 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 SLC15A5A6NIM6 579 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 MIF4GDA9UHW6 222 aaKnown RBP10.91□□□□□ -0.66
MSI2-209ENST00000579483 PPFIA4O75335 1185 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 TJP3O95049 919 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 AMHP03971 560 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 KRT7P08729 469 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 SERPINB6P35237 376 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 CLEC10AQ8IUN9 316 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 EEF2KMTQ96G04 330 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 NUDCD1Q96RS6 583 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 ASCC2Q9H1I8 757 aaPredicted RBP10.91□□□□□ -0.66
MSI2-209ENST00000579483 BCAP29Q9UHQ4 241 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 MYPNQ86TC9 1320 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 RPA1P27694 616 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 CDC25BP30305 580 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 GNA15P30679 374 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 TPD52P55327 224 aaPredicted RBP10.91□□□□□ -0.66
MSI2-209ENST00000579483 NLRP11P59045 1033 aaKnown RBP10.91□□□□□ -0.66
MSI2-209ENST00000579483 ZNF394Q53GI3 561 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 GRAMD1CQ8IYS0 662 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 DAGLBQ8NCG7 672 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 IFT43Q96FT9 208 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 H3BRJ5 948 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 LARGE1O95461 756 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 ODC1P11926 461 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 ACADSBP45954 432 aa10.91□□□□□ -0.66
MSI2-209ENST00000579483 MRPL9Q9BYD2 267 aaKnown RBP10.91□□□□□ -0.66
MSI2-209ENST00000579483 SCAF8Q9UPN6 1271 aaKnown RBP10.91□□□□□ -0.66
MSI2-209ENST00000579483 CIB2O75838 187 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 RWDD2BP57060 319 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 ITPRIPL1Q6GPH6 555 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 ALKBH5Q6P6C2 394 aaKnown RBP10.9□□□□□ -0.66
MSI2-209ENST00000579483 ZNF668Q96K58 619 aaPredicted RBP10.9□□□□□ -0.66
MSI2-209ENST00000579483 ZNF512Q96ME7 567 aaPredicted RBP10.9□□□□□ -0.66
MSI2-209ENST00000579483 RAB3IPQ96QF0 476 aaPredicted RBP10.9□□□□□ -0.66
MSI2-209ENST00000579483 RGL1Q9NZL6 768 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 MOSPD1Q9UJG1 213 aa10.9□□□□□ -0.66
MSI2-209ENST00000579483 DDX41Q9UJV9 622 aaKnown RBP10.9□□□□□ -0.66
MSI2-209ENST00000579483 DSEQ9UL01 958 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms