RNA–Protein interactions for RNA: ENST00000578525.5

CDK5RAP3-208, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 564 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-208	ENST00000578525	GPRC5C	Q9NQ84	441 aa		10.12	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	TTC7A	Q9ULT0	858 aa	Predicted RBP	10.12	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	NFU1	Q9UMS0	254 aa		10.12	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ARID2	Q68CP9	1835 aa		10.12	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	PFAS	O15067	1338 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	NFASC	O94856	1347 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	IGSF9B	Q9UPX0	1349 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	TMEM150B	A6NC51	233 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	DDX3Y	O15523	660 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	BUB1B	O60566	1050 aa	Predicted RBP	10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	LRRN2	O75325	713 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	PSAP	P07602	524 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	NR3C2	P08235	984 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	CAPN2	P17655	700 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	HNRNPH2	P55795	449 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	RNASE9	P60153	205 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ENPEP	Q07075	957 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	PPFIA1	Q13136	1202 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	DMP1	Q13316	513 aa	Predicted RBP	10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	CUL1	Q13616	776 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	CFAP58	Q5T655	872 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	SNRNP48	Q6IEG0	339 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	SAMD7	Q7Z3H4	446 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	APOBEC3F	Q8IUX4	373 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	RHOT2	Q8IXI1	618 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ZNF280C	Q8ND82	737 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	TMEM161B	Q8NDZ6	487 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	SLC35G2	Q8TBE7	412 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	TMC2	Q8TDI7	906 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	RIN2	Q8WYP3	895 aa	Predicted RBP	10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ARHGEF26	Q96DR7	871 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ISCU	Q9H1K1	167 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	SLITRK6	Q9H5Y7	841 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	C17orf75	Q9HAS0	396 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	PICK1	Q9NRD5	415 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	SEPT11	Q9NVA2	429 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	CWC15	Q9P013	229 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	CNOT7	Q9UIV1	285 aa	Known RBP	10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	TBX20	Q9UMR3	447 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	RIPK3	Q9Y572	518 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	PCDHA10	Q9Y5I2	948 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	LOC285556	D6RIA3	1793 aa		10.11	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	RLF	Q13129	1914 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	GOLGA8IP	A6NC78	632 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	GOLGA6C	A6NDK9	693 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	GOLGA8J	A6NMD2	632 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	CCDC169	A6NNP5	214 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	C19orf81	C9J6K1	198 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ANKRD63	C9JTQ0	380 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	KRIT1	O00522	736 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ATP2A1	O14983	1001 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	STAM2	O75886	525 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	STBD1	O95210	358 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	IVL	P07476	585 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	FAM153B	P0C7A2	387 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	GOLGA6D	P0CG33	693 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	KCNA2	P16389	499 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	PTPRA	P18433	802 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ABCB4	P21439	1286 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	GTF2H1	P32780	548 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	NPTX2	P47972	431 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ERVK-9	P63128	1117 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	CLUL1	Q15846	466 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ZSCAN26	Q16670	478 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	PTPRO	Q16827	1216 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	FAM153C	Q494X1	144 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	C11orf63	Q6NUN7	778 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	RPUSD2	Q8IZ73	545 aa	Known RBP	10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ZSWIM2	Q8NEG5	633 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	CCDC26	Q8TAB7	109 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	NSUN6	Q8TEA1	469 aa	Known RBP	10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	SLC20A1	Q8WUM9	679 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	IFT81	Q8WYA0	676 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	BSND	Q8WZ55	320 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	WNK4	Q96J92	1243 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	CDHR1	Q96JP9	859 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	TMEM117	Q9H0C3	514 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	TAF1D	Q9H5J8	278 aa	Predicted RBP	10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	OSGEP	Q9NPF4	335 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	KMT5A	Q9NQR1	393 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	GOLGA6A	Q9NYA3	693 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	TAS2R14	Q9NYV8	317 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	GABBR1	Q9UBS5	961 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	FAM153A	Q9UHL3	310 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ADAMTS5	Q9UNA0	930 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	GJA3	Q9Y6H8	435 aa		10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	COL11A1	P12107	1806 aa	Predicted RBP	10.1	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	MYPN	Q86TC9	1320 aa		10.09	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ESYT3	A0FGR9	886 aa		10.09	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	DENND3	A2RUS2	1198 aa		10.09	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525		H0YCG3	227 aa		10.09	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	FZD9	O00144	591 aa		10.09	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	RTN2	O75298	545 aa		10.09	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	MTA2	O94776	668 aa		10.09	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ZBTB7A	O95365	584 aa		10.09	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	CHRNB2	P17787	502 aa		10.09	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	ABCD1	P33897	745 aa		10.09	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	HSPA9	P38646	679 aa	Known RBP	10.09	□□□□□ -0.79
CDK5RAP3-208	ENST00000578525	MFAP3	P55082	362 aa		10.09	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms