RNA–Protein interactions for RNA: ENST00000578314.1

VAPA-205, Transcript of VAMP associated protein A, humanhuman

TSL 3

Gene VAPA, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-205ENST00000578314 PBX3P40426 434 aa25.47■■□□□ 1.67
VAPA-205ENST00000578314 KRT17Q04695 432 aa25.47■■□□□ 1.67
VAPA-205ENST00000578314 CUL4AQ13619 759 aa25.47■■□□□ 1.67
VAPA-205ENST00000578314 LARP1BQ659C4 914 aaKnown RBP25.47■■□□□ 1.67
VAPA-205ENST00000578314 NOTUMQ6P988 496 aa25.47■■□□□ 1.67
VAPA-205ENST00000578314 DTHD1Q6ZMT9 781 aa25.47■■□□□ 1.67
VAPA-205ENST00000578314 MAEAQ7L5Y9 396 aa25.47■■□□□ 1.67
VAPA-205ENST00000578314 EFHBQ8N7U6 833 aa25.47■■□□□ 1.67
VAPA-205ENST00000578314 TBC1D13Q9NVG8 400 aa25.47■■□□□ 1.67
VAPA-205ENST00000578314 KIAA1024Q9UPX6 916 aa25.47■■□□□ 1.67
VAPA-205ENST00000578314 PCDHGC5Q9Y5F6 944 aa25.47■■□□□ 1.67
VAPA-205ENST00000578314 ARID2Q68CP9 1835 aa25.47■■□□□ 1.67
VAPA-205ENST00000578314 CNTNAP2Q9UHC6 1331 aa25.46■■□□□ 1.67
VAPA-205ENST00000578314 CARNS1A5YM72 827 aa25.46■■□□□ 1.67
VAPA-205ENST00000578314 NRIP1P48552 1158 aa25.46■■□□□ 1.67
VAPA-205ENST00000578314 ALDH7A1P49419 539 aaKnown RBP25.46■■□□□ 1.67
VAPA-205ENST00000578314 BCAR1P56945 870 aa25.46■■□□□ 1.67
VAPA-205ENST00000578314 ATP2C1P98194 919 aaPredicted RBP25.46■■□□□ 1.67
VAPA-205ENST00000578314 DLX2Q07687 328 aaPredicted RBP25.46■■□□□ 1.67
VAPA-205ENST00000578314 SMG8Q8ND04 991 aaKnown RBP25.46■■□□□ 1.67
VAPA-205ENST00000578314 CSRNP2Q9H175 543 aa25.46■■□□□ 1.67
VAPA-205ENST00000578314 LINC01565O15544 149 aa25.45■■□□□ 1.66
VAPA-205ENST00000578314 KRT79Q5XKE5 535 aa25.45■■□□□ 1.66
VAPA-205ENST00000578314 CDCA2Q69YH5 1023 aaPredicted RBP25.45■■□□□ 1.66
VAPA-205ENST00000578314 SNX29Q8TEQ0 813 aa25.45■■□□□ 1.66
VAPA-205ENST00000578314 CPB2Q96IY4 423 aa25.45■■□□□ 1.66
VAPA-205ENST00000578314 C1QTNF1Q9BXJ1 281 aa25.45■■□□□ 1.66
VAPA-205ENST00000578314 EIF2AQ9BY44 585 aaKnown RBP25.45■■□□□ 1.66
VAPA-205ENST00000578314 NRDE2Q9H7Z3 1164 aa25.45■■□□□ 1.66
VAPA-205ENST00000578314 TLE6Q9H808 572 aa25.45■■□□□ 1.66
VAPA-205ENST00000578314 RSAD1Q9HA92 442 aa25.45■■□□□ 1.66
VAPA-205ENST00000578314 NGRNQ9NPE2 291 aaKnown RBP25.45■■□□□ 1.66
VAPA-205ENST00000578314 UBN1Q9NPG3 1134 aa25.45■■□□□ 1.66
VAPA-205ENST00000578314 INPP5FQ9Y2H2 1132 aa25.45■■□□□ 1.66
VAPA-205ENST00000578314 IL9P15248 144 aa25.44■■□□□ 1.66
VAPA-205ENST00000578314 ARF4P18085 180 aaPredicted RBP25.44■■□□□ 1.66
VAPA-205ENST00000578314 COL9A1P20849 921 aa25.44■■□□□ 1.66
VAPA-205ENST00000578314 RBM23Q86U06 439 aaKnown RBP25.44■■□□□ 1.66
VAPA-205ENST00000578314 FAM178BQ8IXR5 827 aa25.44■■□□□ 1.66
VAPA-205ENST00000578314 CDCA3Q99618 268 aaPredicted RBP25.44■■□□□ 1.66
VAPA-205ENST00000578314 BHMT2Q9H2M3 363 aa25.44■■□□□ 1.66
VAPA-205ENST00000578314 FZD8Q9H461 694 aa25.44■■□□□ 1.66
VAPA-205ENST00000578314 DDX19AQ9NUU7 478 aaKnown RBP25.44■■□□□ 1.66
VAPA-205ENST00000578314 IPPQ9Y573 584 aa25.44■■□□□ 1.66
VAPA-205ENST00000578314 A0A1B0GUA9 196 aa25.43■■□□□ 1.66
VAPA-205ENST00000578314 LRRIQ4A6NIV6 560 aa25.43■■□□□ 1.66
VAPA-205ENST00000578314 B4GALT5O43286 388 aa25.43■■□□□ 1.66
VAPA-205ENST00000578314 TBX10O75333 385 aa25.43■■□□□ 1.66
VAPA-205ENST00000578314 PPP4R3CPQ6ZMV5 832 aa25.43■■□□□ 1.66
VAPA-205ENST00000578314 URGCPQ8TCY9 931 aa25.43■■□□□ 1.66
VAPA-205ENST00000578314 BSNDQ8WZ55 320 aa25.43■■□□□ 1.66
VAPA-205ENST00000578314 PRIMPOLQ96LW4 560 aa25.43■■□□□ 1.66
VAPA-205ENST00000578314 TCF25Q9BQ70 676 aa25.43■■□□□ 1.66
VAPA-205ENST00000578314 MMTAG2Q9BU76 263 aaKnown RBP25.43■■□□□ 1.66
VAPA-205ENST00000578314 PRMT7Q9NVM4 692 aaPredicted RBP25.43■■□□□ 1.66
VAPA-205ENST00000578314 KANSL3Q9P2N6 904 aa25.43■■□□□ 1.66
VAPA-205ENST00000578314 FAM50BQ9Y247 325 aa25.43■■□□□ 1.66
VAPA-205ENST00000578314 FSD2A1L4K1 749 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 PP2D1A8MPX8 630 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 NT5C1B-RDH14C9J2C7 533 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 INPPL1O15357 1258 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 ZC3H11AO75152 810 aaKnown RBP eCLIP25.42■■□□□ 1.66
VAPA-205ENST00000578314 EYA4O95677 639 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 GALTP07902 379 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 ITGA4P13612 1032 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 CDC25AP30304 524 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 AFF1P51825 1210 aaKnown RBP25.42■■□□□ 1.66
VAPA-205ENST00000578314 RNASELQ05823 741 aaKnown RBP25.42■■□□□ 1.66
VAPA-205ENST00000578314 DUSP6Q16828 381 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 FAM187BQ17R55 369 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 ARL6IP4Q66PJ3 421 aaKnown RBP25.42■■□□□ 1.66
VAPA-205ENST00000578314 ZNF280BQ86YH2 543 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 MSLNLQ96KJ4 702 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 C2orf40Q9H1Z8 148 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 RNF39Q9H2S5 420 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 CD320Q9NPF0 282 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 CLEC1BQ9P126 229 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 DNM3Q9UQ16 869 aa25.42■■□□□ 1.66
VAPA-205ENST00000578314 PER2O15055 1255 aa25.41■■□□□ 1.66
VAPA-205ENST00000578314 NAMPTP43490 491 aa25.41■■□□□ 1.66
VAPA-205ENST00000578314 PLPP4Q5VZY2 271 aa25.41■■□□□ 1.66
VAPA-205ENST00000578314 SLC27A1Q6PCB7 646 aa25.41■■□□□ 1.66
VAPA-205ENST00000578314 TMC7Q7Z402 723 aa25.41■■□□□ 1.66
VAPA-205ENST00000578314 ZBTB8OSQ8IWT0 167 aa25.41■■□□□ 1.66
VAPA-205ENST00000578314 TMEM169Q96HH4 297 aa25.41■■□□□ 1.66
VAPA-205ENST00000578314 IGSF21Q96ID5 467 aa25.41■■□□□ 1.66
VAPA-205ENST00000578314 EPHX3Q9H6B9 360 aa25.41■■□□□ 1.66
VAPA-205ENST00000578314 ENTPD7Q9NQZ7 604 aa25.41■■□□□ 1.66
VAPA-205ENST00000578314 PLXNA4Q9HCM2 1894 aa25.4■■□□□ 1.66
VAPA-205ENST00000578314 HIDE1A8MVS5 230 aa25.4■■□□□ 1.66
VAPA-205ENST00000578314 E9PMD0 336 aa25.4■■□□□ 1.66
VAPA-205ENST00000578314 DDHD2O94830 711 aa25.4■■□□□ 1.66
VAPA-205ENST00000578314 GLP2RO95838 553 aa25.4■■□□□ 1.66
VAPA-205ENST00000578314 NDUFV1P49821 464 aa25.4■■□□□ 1.66
VAPA-205ENST00000578314 PPP2R5AQ15172 486 aa25.4■■□□□ 1.66
VAPA-205ENST00000578314 TMEM173Q86WV6 379 aaPredicted RBP25.4■■□□□ 1.66
VAPA-205ENST00000578314 KCTD17Q8N5Z5 321 aa25.4■■□□□ 1.66
VAPA-205ENST00000578314 KIFAP3Q92845 792 aa25.4■■□□□ 1.66
VAPA-205ENST00000578314 KHSRPQ92945 711 aaKnown RBP eCLIP25.4■■□□□ 1.662e-9■■■□□ 18.8
VAPA-205ENST00000578314 DNAJB4Q9UDY4 337 aa25.4■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms