RNA–Protein interactions for RNA: ENST00000575507.1

EDC4-210, Transcript of enhancer of mRNA decapping 4, human

TSL 2

Gene EDC4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EDC4-210	ENST00000575507	SMC3	Q9UQE7	1217 aa		15.73	■□□□□ 0.11
EDC4-210	ENST00000575507	INPP5F	Q9Y2H2	1132 aa		15.73	■□□□□ 0.11
EDC4-210	ENST00000575507	USP20	Q9Y2K6	914 aa		15.73	■□□□□ 0.11
EDC4-210	ENST00000575507	HES2	Q9Y543	173 aa		15.73	■□□□□ 0.11
EDC4-210	ENST00000575507	HIDE1	A8MVS5	230 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507		E9PMD0	336 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	SKI	P12755	728 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	RAB27A	P51159	221 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	TFDP1	Q14186	410 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	KCNK18	Q7Z418	384 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	FAM178B	Q8IXR5	827 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	EFHB	Q8N7U6	833 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	MSLNL	Q96KJ4	702 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	NFKBIZ	Q9BYH8	718 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	BHMT2	Q9H2M3	363 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	DDX19A	Q9NUU7	478 aa	Known RBP	15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	MIOS	Q9NXC5	875 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	LZTS1	Q9Y250	596 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	IPP	Q9Y573	584 aa		15.72	■□□□□ 0.11
EDC4-210	ENST00000575507	PLXNA4	Q9HCM2	1894 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	TCF20	Q9UGU0	1960 aa	Known RBP	15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	ARID2	Q68CP9	1835 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	NCK2	O43639	380 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	ERLIN2	O94905	339 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	EDN1	P05305	212 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	GALT	P07902	379 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	NCL	P19338	710 aa	Known RBP	15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	MUT	P22033	750 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	PRPH	P41219	470 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	KCNC3	Q14003	757 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	CSPP1	Q1MSJ5	1256 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	RILPL1	Q5EBL4	403 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	LARP1B	Q659C4	914 aa	Known RBP	15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	GLB1L	Q6UWU2	654 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	SNX29	Q8TEQ0	813 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	PGBD4	Q96DM1	585 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	CCDC43	Q96MW1	224 aa	Known RBP	15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	CSRNP2	Q9H175	543 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	TLE6	Q9H808	572 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507	KIF3A	Q9Y496	699 aa		15.71	■□□□□ 0.11
EDC4-210	ENST00000575507		A0A1B0GUA9	196 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	ARHGEF35	A5YM69	484 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	LRRIQ4	A6NIV6	560 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507		H3BQV1	296 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	MBTPS2	O43462	519 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	ZC3H11A	O75152	810 aa	Known RBP eCLIP	15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	POMC	P01189	267 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	AXL	P30530	894 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	SLC11A1	P49279	550 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	ALDH7A1	P49419	539 aa	Known RBP	15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	ATP2C1	P98194	919 aa	Predicted RBP	15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	PLPP4	Q5VZY2	271 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	MCPH1	Q8NEM0	835 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	TCF25	Q9BQ70	676 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	VN1R3	Q9BXE9	311 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	MRPL9	Q9BYD2	267 aa	Known RBP	15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	GBP3	Q9H0R5	595 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	FZD8	Q9H461	694 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	RSAD1	Q9HA92	442 aa		15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	BARX2	Q9UMQ3	279 aa	Predicted RBP	15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	15.7	■□□□□ 0.1
EDC4-210	ENST00000575507	LAD1	O00515	517 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	ITGA4	P13612	1032 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	KRT17	Q04695	432 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	PCBP1	Q15365	356 aa	Known RBP eCLIP	15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	DUSP6	Q16828	381 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	HAUS3	Q68CZ6	603 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	CDCA2	Q69YH5	1023 aa	Predicted RBP	15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	NOTUM	Q6P988	496 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	DTHD1	Q6ZMT9	781 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	TMC7	Q7Z402	723 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	HSCB	Q8IWL3	235 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	DAW1	Q8N136	415 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	MRPL43	Q8N983	215 aa	Known RBP	15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	GSTCD	Q8NEC7	633 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	AUTS2	Q8WXX7	1259 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	IGSF21	Q96ID5	467 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	ZFP42	Q96MM3	310 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	PNMA5	Q96PV4	448 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	GAD1	Q99259	594 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	KIFC3	Q9BVG8	833 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	CCDC113	Q9H0I3	377 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	CXCL16	Q9H2A7	254 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	NXF3	Q9H4D5	531 aa	Known RBP	15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	EPHX3	Q9H6B9	360 aa		15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	PUF60	Q9UHX1	559 aa	Known RBP	15.69	■□□□□ 0.1
EDC4-210	ENST00000575507	ARL5C	A6NH57	179 aa		15.68	■□□□□ 0.1
EDC4-210	ENST00000575507	NPTXR	O95502	500 aa		15.68	■□□□□ 0.1
EDC4-210	ENST00000575507	EYA4	O95677	639 aa		15.68	■□□□□ 0.1
EDC4-210	ENST00000575507	AKAP5	P24588	427 aa		15.68	■□□□□ 0.1
EDC4-210	ENST00000575507	PPM1A	P35813	382 aa		15.68	■□□□□ 0.1
EDC4-210	ENST00000575507	NDUFV1	P49821	464 aa		15.68	■□□□□ 0.1
EDC4-210	ENST00000575507	RNASEL	Q05823	741 aa	Known RBP	15.68	■□□□□ 0.1
EDC4-210	ENST00000575507	PUS10	Q3MIT2	529 aa	Known RBP	15.68	■□□□□ 0.1
EDC4-210	ENST00000575507	PDE12	Q6L8Q7	609 aa	Known RBP	15.68	■□□□□ 0.1
EDC4-210	ENST00000575507	PPP4R3CP	Q6ZMV5	832 aa		15.68	■□□□□ 0.1
EDC4-210	ENST00000575507	PLIN2	Q99541	437 aa		15.68	■□□□□ 0.1
EDC4-210	ENST00000575507	APOL6	Q9BWW8	343 aa		15.68	■□□□□ 0.1
EDC4-210	ENST00000575507	TSHZ2	Q9NRE2	1034 aa		15.68	■□□□□ 0.1
EDC4-210	ENST00000575507	CD207	Q9UJ71	328 aa		15.68	■□□□□ 0.1

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms