RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 GLB1LQ6UWU2 654 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 MAEAQ7L5Y9 396 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 PPP2R3CQ969Q6 453 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 CCDC51Q96ER9 411 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 NRDE2Q9H7Z3 1164 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 CD320Q9NPF0 282 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 CLEC1BQ9P126 229 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 SMC3Q9UQE7 1217 aa21.85■■□□□ 1.09
SCARF1-208ENST00000574545 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.85■■□□□ 1.09
SCARF1-208ENST00000574545 NT5C1B-RDH14C9J2C7 533 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 B4GALT3O60512 393 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 ERLIN2O94905 339 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 GLP2RO95838 553 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 ARF4P18085 180 aaPredicted RBP21.84■■□□□ 1.09
SCARF1-208ENST00000574545 NRIP1P48552 1158 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 CDCA2Q69YH5 1023 aaPredicted RBP21.84■■□□□ 1.09
SCARF1-208ENST00000574545 EP400NLQ6ZTU2 488 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 RBM23Q86U06 439 aaKnown RBP21.84■■□□□ 1.09
SCARF1-208ENST00000574545 MICAL1Q8TDZ2 1067 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 BSNDQ8WZ55 320 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 CPB2Q96IY4 423 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 MSLNLQ96KJ4 702 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 EIF2AQ9BY44 585 aaKnown RBP21.84■■□□□ 1.09
SCARF1-208ENST00000574545 RNF39Q9H2S5 420 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 FZD8Q9H461 694 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 PUF60Q9UHX1 559 aaKnown RBP21.84■■□□□ 1.09
SCARF1-208ENST00000574545 KIAA1024Q9UPX6 916 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 STK24Q9Y6E0 443 aa21.84■■□□□ 1.09
SCARF1-208ENST00000574545 CNTNAP2Q9UHC6 1331 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 A0A1B0GUA9 196 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 H3BQV1 296 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 INPPL1O15357 1258 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 GALTP07902 379 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 ATP2C1P98194 919 aaPredicted RBP21.83■■□□□ 1.09
SCARF1-208ENST00000574545 KRT17Q04695 432 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 KCNC3Q14003 757 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 NOTUMQ6P988 496 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 PPP4R3CPQ6ZMV5 832 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 TMEM173Q86WV6 379 aaPredicted RBP21.83■■□□□ 1.09
SCARF1-208ENST00000574545 ZNF280BQ86YH2 543 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 CNNM3Q8NE01 707 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 MMTAG2Q9BU76 263 aaKnown RBP21.83■■□□□ 1.09
SCARF1-208ENST00000574545 CSRNP2Q9H175 543 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 TLE6Q9H808 572 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 RSAD1Q9HA92 442 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 IPPQ9Y573 584 aa21.83■■□□□ 1.09
SCARF1-208ENST00000574545 C5orf42Q9H799 3197 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 ARHGEF35A5YM69 484 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 PP2D1A8MPX8 630 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 PER2O15055 1255 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 B4GALT5O43286 388 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 ALDH7A1P49419 539 aaKnown RBP21.82■■□□□ 1.08
SCARF1-208ENST00000574545 DUSP6Q16828 381 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 FAM187BQ17R55 369 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 LARP1BQ659C4 914 aaKnown RBP21.82■■□□□ 1.08
SCARF1-208ENST00000574545 DTHD1Q6ZMT9 781 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 VN1R2Q8NFZ6 395 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 SNX29Q8TEQ0 813 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 RAB34Q9BZG1 259 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 BHMT2Q9H2M3 363 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 NGRNQ9NPE2 291 aaKnown RBP21.82■■□□□ 1.08
SCARF1-208ENST00000574545 DNAJB4Q9UDY4 337 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 INPP5FQ9Y2H2 1132 aa21.82■■□□□ 1.08
SCARF1-208ENST00000574545 HIDE1A8MVS5 230 aa21.81■■□□□ 1.08
SCARF1-208ENST00000574545 MBTPS2O43462 519 aa21.81■■□□□ 1.08
SCARF1-208ENST00000574545 DDHD2O94830 711 aa21.81■■□□□ 1.08
SCARF1-208ENST00000574545 EYA4O95677 639 aa21.81■■□□□ 1.08
SCARF1-208ENST00000574545 CDC25AP30304 524 aa21.81■■□□□ 1.08
SCARF1-208ENST00000574545 NCBP1Q09161 790 aaKnown RBP21.81■■□□□ 1.08
SCARF1-208ENST00000574545 SMAD2Q15796 467 aaKnown RBP21.81■■□□□ 1.08
SCARF1-208ENST00000574545 IGSF21Q96ID5 467 aa21.81■■□□□ 1.08
SCARF1-208ENST00000574545 PRIMPOLQ96LW4 560 aa21.81■■□□□ 1.08
SCARF1-208ENST00000574545 CDCA3Q99618 268 aaPredicted RBP21.81■■□□□ 1.08
SCARF1-208ENST00000574545 TCF25Q9BQ70 676 aa21.81■■□□□ 1.08
SCARF1-208ENST00000574545 DDX19AQ9NUU7 478 aaKnown RBP21.81■■□□□ 1.08
SCARF1-208ENST00000574545 CARNS1A5YM72 827 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 LRRIQ4A6NIV6 560 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 E9PMD0 336 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 ZC3H11AO75152 810 aaKnown RBP eCLIP21.8■■□□□ 1.08
SCARF1-208ENST00000574545 ITGA4P13612 1032 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 SLC11A1P49279 550 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 COASYQ13057 564 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 PLPP4Q5VZY2 271 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 KRT79Q5XKE5 535 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 TMEM184AQ6ZMB5 413 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 BCL7CQ8WUZ0 217 aaPredicted RBP21.8■■□□□ 1.08
SCARF1-208ENST00000574545 KHSRPQ92945 711 aaKnown RBP eCLIP21.8■■□□□ 1.08
SCARF1-208ENST00000574545 POLD4Q9HCU8 107 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 UBN1Q9NPG3 1134 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 PRMT7Q9NVM4 692 aaPredicted RBP21.8■■□□□ 1.08
SCARF1-208ENST00000574545 MIOSQ9NXC5 875 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 KANSL3Q9P2N6 904 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 HES2Q9Y543 173 aa21.8■■□□□ 1.08
SCARF1-208ENST00000574545 TTLL13PA6NNM8 815 aa21.79■■□□□ 1.08
SCARF1-208ENST00000574545 NAMPTP43490 491 aa21.79■■□□□ 1.08
SCARF1-208ENST00000574545 NDUFV1P49821 464 aa21.79■■□□□ 1.08
SCARF1-208ENST00000574545 RBM10P98175 930 aaKnown RBP21.79■■□□□ 1.08
SCARF1-208ENST00000574545 SMAD4Q13485 552 aaKnown RBP21.79■■□□□ 1.08
SCARF1-208ENST00000574545 CLUL1Q15846 466 aa21.79■■□□□ 1.08
SCARF1-208ENST00000574545 HYIQ5T013 277 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms