RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 ACAP1Q15027 740 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 GCDHQ92947 438 aaPredicted RBP6.44□□□□□ -1.38
CDC27-215ENST00000573550 GPHA2Q96T91 129 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 FDXACB1Q9BRP7 624 aaPredicted RBP6.44□□□□□ -1.38
CDC27-215ENST00000573550 C1QTNF3Q9BXJ4 246 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 SLC6A15Q9H2J7 730 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 AGO3Q9H9G7 860 aaKnown RBP6.44□□□□□ -1.38
CDC27-215ENST00000573550 VTA1Q9NP79 307 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 JAG2Q9Y219 1238 aa6.44□□□□□ -1.38
CDC27-215ENST00000573550 MAGI1Q96QZ7 1491 aaPredicted RBP6.43□□□□□ -1.38
CDC27-215ENST00000573550 ZNF623O75123 536 aa6.43□□□□□ -1.38
CDC27-215ENST00000573550 RAD17O75943 681 aa6.43□□□□□ -1.38
CDC27-215ENST00000573550 CPEP16870 476 aa6.43□□□□□ -1.38
CDC27-215ENST00000573550 GPR15P49685 360 aa6.43□□□□□ -1.38
CDC27-215ENST00000573550 TRIM25Q14258 630 aaKnown RBP6.43□□□□□ -1.38
CDC27-215ENST00000573550 PITRM1Q5JRX3 1037 aa6.43□□□□□ -1.38
CDC27-215ENST00000573550 CCDC62Q6P9F0 684 aa6.43□□□□□ -1.38
CDC27-215ENST00000573550 PLA2G15Q8NCC3 412 aa6.43□□□□□ -1.38
CDC27-215ENST00000573550 SHCBP1Q8NEM2 672 aa6.43□□□□□ -1.38
CDC27-215ENST00000573550 CHST13Q8NET6 341 aa6.43□□□□□ -1.38
CDC27-215ENST00000573550 RABGGTAQ92696 567 aa6.43□□□□□ -1.38
CDC27-215ENST00000573550 OR14A2Q96R54 314 aa6.43□□□□□ -1.38
CDC27-215ENST00000573550 USP18Q9UMW8 372 aa6.43□□□□□ -1.38
CDC27-215ENST00000573550 EIF4G3O43432 1585 aaKnown RBP6.43□□□□□ -1.38
CDC27-215ENST00000573550 TDRD9Q8NDG6 1382 aaKnown RBP6.43□□□□□ -1.38
CDC27-215ENST00000573550 DENND4BO75064 1496 aaPredicted RBP6.42□□□□□ -1.38
CDC27-215ENST00000573550 ADGRL2O95490 1459 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 ADRB1P08588 477 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 GAAP10253 952 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 ZNF20P17024 532 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 RPS19P39019 145 aaKnown RBP6.42□□□□□ -1.38
CDC27-215ENST00000573550 BPIFB4P59827 614 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 RIN1Q13671 783 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 GAGE13Q4V321 117 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 CCDC178Q5BJE1 867 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 RNF187Q5TA31 235 aaPredicted RBP6.42□□□□□ -1.38
CDC27-215ENST00000573550 SPATS2Q86XZ4 545 aaKnown RBP6.42□□□□□ -1.38
CDC27-215ENST00000573550 CMIPQ8IY22 773 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 ANKRD53Q8N9V6 530 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 PIK3C3Q8NEB9 887 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 WDR66Q8TBY9 1149 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 GAB3Q8WWW8 586 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 KRTAP4-7Q9BYR0 210 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 PRSS50Q9UI38 385 aa6.42□□□□□ -1.38
CDC27-215ENST00000573550 RPRD2Q5VT52 1461 aaKnown RBP6.41□□□□□ -1.38
CDC27-215ENST00000573550 TEX14Q8IWB6 1497 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 SHANK2Q9UPX8 1470 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 DISP1Q96F81 1524 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 TOX4O94842 621 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 VSIG10L2P0DP72 767 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 SELENOPP49908 381 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 CD69Q07108 199 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 PPARAQ07869 468 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 R3HDM1Q15032 1099 aaKnown RBP6.41□□□□□ -1.38
CDC27-215ENST00000573550 FSCN1Q16658 493 aaKnown RBP6.41□□□□□ -1.38
CDC27-215ENST00000573550 MAN2A1Q16706 1144 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 CT83Q5H943 113 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 IQSEC1Q6DN90 963 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 ZNF585AQ6P3V2 769 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 GAREM2Q75VX8 874 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 UNC5BQ8IZJ1 945 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 RPL10LQ96L21 214 aaKnown RBP6.41□□□□□ -1.38
CDC27-215ENST00000573550 ACAP3Q96P50 834 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 KRTAP9-3Q9BYQ3 159 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 KCTD10Q9H3F6 313 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 NELFAQ9H3P2 528 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 C14orf93Q9H972 538 aaKnown RBP6.41□□□□□ -1.38
CDC27-215ENST00000573550 EVLQ9UI08 416 aaPredicted RBP6.41□□□□□ -1.38
CDC27-215ENST00000573550 KCNG1Q9UIX4 513 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 NUP153P49790 1475 aaKnown RBP6.41□□□□□ -1.38
CDC27-215ENST00000573550 GRIN2AQ12879 1464 aa6.41□□□□□ -1.38
CDC27-215ENST00000573550 DAPK3O43293 454 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 PRKD3O94806 890 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 FSBPO95073 299 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 LY86O95711 162 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 LPLP06858 475 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 COMTP21964 271 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 ENPP1P22413 925 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 KIR2DL3P43628 341 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 FOXL1Q12952 345 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 CDSNQ15517 529 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 RNF219Q5W0B1 726 aaPredicted RBP6.4□□□□□ -1.38
CDC27-215ENST00000573550 Q6ZSN1 163 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 POLNQ7Z5Q5 900 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 ADGRE4PQ86SQ3 457 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 DDX42Q86XP3 938 aaKnown RBP eCLIP6.4□□□□□ -1.38
CDC27-215ENST00000573550 OR14C36Q8NHC7 312 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 COG1Q8WTW3 980 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 LMBR1Q8WVP7 490 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 RSAD2Q8WXG1 361 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 DVL3Q92997 716 aaPredicted RBP6.4□□□□□ -1.38
CDC27-215ENST00000573550 ORAI2Q96SN7 254 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 KLC2Q9H0B6 622 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 PLA2G3Q9NZ20 509 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 MCM8Q9UJA3 840 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 ATP8A1Q9Y2Q0 1164 aa6.4□□□□□ -1.38
CDC27-215ENST00000573550 DAPK1P53355 1430 aa6.4□□□□□ -1.39
CDC27-215ENST00000573550 CDK13Q14004 1512 aaKnown RBP6.4□□□□□ -1.39
CDC27-215ENST00000573550 KDM5DQ9BY66 1539 aa6.4□□□□□ -1.39
CDC27-215ENST00000573550 MTSS1O43312 755 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms