RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 MED24O75448 989 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 ERLIN2O94905 339 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 MBTD1Q05BQ5 628 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 AMHR2Q16671 573 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 NOTUMQ6P988 496 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 VN1R2Q8NFZ6 395 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 ERMNQ8TAM6 284 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 ASAP3Q8TDY4 903 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 PIGOQ8TEQ8 1089 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 LPPQ93052 612 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 CCDC43Q96MW1 224 aaKnown RBP18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 NRDE2Q9H7Z3 1164 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 ENTPD7Q9NQZ7 604 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 BMP2KQ9NSY1 1161 aaPredicted RBP18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 NOL7Q9UMY1 257 aaKnown RBP18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 KIF3AQ9Y496 699 aa18.99■□□□□ 0.63
MAP1LC3B-208ENST00000570189 CSPG5O95196 566 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 GALTP07902 379 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 SRGAP2BP0DMP2 458 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 ALADP13716 330 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 GLRA2P23416 452 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 PBX3P40426 434 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 TECP42680 631 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 GIT2Q14161 759 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 PDIA5Q14554 519 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 SMC1AQ14683 1233 aaKnown RBP18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 ZNF174Q15697 407 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 HAUS3Q68CZ6 603 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 CDCA2Q69YH5 1023 aaPredicted RBP18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 DDX53Q86TM3 631 aaKnown RBP18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 RBM23Q86U06 439 aaKnown RBP18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 MRPL43Q8N983 215 aaKnown RBP18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 SMG8Q8ND04 991 aaKnown RBP18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 SUSD6Q92537 303 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 TMEM169Q96HH4 297 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 IGSF21Q96ID5 467 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 PRIMPOLQ96LW4 560 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 RSAD1Q9HA92 442 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 STK24Q9Y6E0 443 aa18.98■□□□□ 0.63
MAP1LC3B-208ENST00000570189 LAD1O00515 517 aa18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 HOXB8P17481 243 aaPredicted RBP18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 ATP2B1P20020 1258 aa18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 SSTR3P32745 418 aaPredicted RBP18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 NCBP1Q09161 790 aaKnown RBP18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 BMS1Q14692 1282 aaKnown RBP18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 FAM187BQ17R55 369 aa18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 PLPP4Q5VZY2 271 aa18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 PPP4R3CPQ6ZMV5 832 aa18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 IGSF22Q8N9C0 903 aa18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 URGCPQ8TCY9 931 aa18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 TMEM175Q9BSA9 504 aa18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 ZBP1Q9H171 429 aa18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 CSRNP2Q9H175 543 aa18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 POLR3FQ9H1D9 316 aaPredicted RBP18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 C11orf16Q9NQ32 467 aa18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 BARX2Q9UMQ3 279 aaPredicted RBP18.97■□□□□ 0.63
MAP1LC3B-208ENST00000570189 C2orf71A6NGG8 1288 aa18.96■□□□□ 0.63
MAP1LC3B-208ENST00000570189 HIDE1A8MVS5 230 aa18.96■□□□□ 0.63
MAP1LC3B-208ENST00000570189 PER2O15055 1255 aa18.96■□□□□ 0.63
MAP1LC3B-208ENST00000570189 ZC3H11AO75152 810 aaKnown RBP eCLIP18.96■□□□□ 0.63
MAP1LC3B-208ENST00000570189 PRPHP41219 470 aa18.96■□□□□ 0.63
MAP1LC3B-208ENST00000570189 TOB1P50616 345 aaPredicted RBP18.96■□□□□ 0.63
MAP1LC3B-208ENST00000570189 GNL2Q13823 731 aaKnown RBP18.96■□□□□ 0.63
MAP1LC3B-208ENST00000570189 CBX2Q14781 532 aaPredicted RBP18.96■□□□□ 0.63
MAP1LC3B-208ENST00000570189 CLUL1Q15846 466 aa18.96■□□□□ 0.63
MAP1LC3B-208ENST00000570189 TMEM31Q5JXX7 168 aa18.96■□□□□ 0.63
MAP1LC3B-208ENST00000570189 TMC7Q7Z402 723 aa18.96■□□□□ 0.63
MAP1LC3B-208ENST00000570189 ARIH1Q9Y4X5 557 aaPredicted RBP18.96■□□□□ 0.63
MAP1LC3B-208ENST00000570189 IPPQ9Y573 584 aa18.96■□□□□ 0.63
MAP1LC3B-208ENST00000570189 A0A1B0GUA9 196 aa18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 INO80B-WBP1J3KQ70 363 aa18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 USO1O60763 962 aaKnown RBP18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 CTSAP10619 480 aa18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 ARF4P18085 180 aaPredicted RBP18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 COL9A1P20849 921 aa18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 MCM2P49736 904 aa18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 ANKRD54Q6NXT1 300 aa18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 POTEGQ6S5H5 508 aa18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 TMEM173Q86WV6 379 aaPredicted RBP18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 LRFN3Q9BTN0 628 aa18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 S1PR5Q9H228 398 aa18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 UPF2Q9HAU5 1272 aaKnown RBP18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 USP15Q9Y4E8 981 aaPredicted RBP18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 TRIOO75962 3097 aa18.95■□□□□ 0.62
MAP1LC3B-208ENST00000570189 LOC730098B7Z3J9 87 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 DCXO43602 365 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 B4GALT3O60512 393 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 CYP11B2P19099 503 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 SLC11A1P49279 550 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 RNASELQ05823 741 aaKnown RBP18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 DSC1Q08554 894 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 SLC27A1Q6PCB7 646 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 ZNF280BQ86YH2 543 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 VPS52Q8N1B4 723 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 CASP10Q92851 521 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 TMX3Q96JJ7 454 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 EIF2AQ9BY44 585 aaKnown RBP18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 RAB34Q9BZG1 259 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 C2orf40Q9H1Z8 148 aa18.94■□□□□ 0.62
MAP1LC3B-208ENST00000570189 FZD8Q9H461 694 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms