RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 TRPV6Q9H1D0 765 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 POLD4Q9HCU8 107 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 ARHGAP28Q9P2N2 729 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 PHLPP2Q6ZVD8 1323 aa11.51□□□□□ -0.57
CDH3-210ENST00000569117 LRRIQ4A6NIV6 560 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 BIN1O00499 593 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 EIF3DO15371 548 aaKnown RBP eCLIP11.5□□□□□ -0.57
CDH3-210ENST00000569117 TLR3O15455 904 aaKnown RBP11.5□□□□□ -0.57
CDH3-210ENST00000569117 EN2P19622 333 aaPredicted RBP11.5□□□□□ -0.57
CDH3-210ENST00000569117 BMP6P22004 513 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 PHKA2P46019 1235 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 CASP5P51878 434 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 SMTNP53814 917 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 MRPS6P82932 125 aaKnown RBP11.5□□□□□ -0.57
CDH3-210ENST00000569117 CDC42EP1Q00587 391 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 STK4Q13043 487 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 STX1AQ16623 288 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 BMT2Q1RMZ1 405 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 TRIM60Q495X7 471 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 SASS6Q6UVJ0 657 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 STXBP4Q6ZWJ1 553 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 EPM2AIP1Q7L775 607 aaPredicted RBP11.5□□□□□ -0.57
CDH3-210ENST00000569117 KSR1Q8IVT5 923 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 CCDC155Q8N6L0 562 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 RNF149Q8NC42 400 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 TMEM161BQ8NDZ6 487 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 HVCN1Q96D96 273 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 NLRP4Q96MN2 994 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 FUCA2Q9BTY2 467 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 STRA6Q9BX79 667 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 FGFBP2Q9BYJ0 223 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 C2orf40Q9H1Z8 148 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 MRPL44Q9H9J2 332 aaKnown RBP11.5□□□□□ -0.57
CDH3-210ENST00000569117 KMT5AQ9NQR1 393 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 GDAQ9Y2T3 454 aa11.5□□□□□ -0.57
CDH3-210ENST00000569117 CCDC169A6NNP5 214 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 SLC16A4O15374 487 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 PQBP1O60828 265 aaKnown RBP11.49□□□□□ -0.57
CDH3-210ENST00000569117 GPR32O75388 356 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 GCNT3O95395 438 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 CCDC192P0DO97 292 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 NMT1P30419 496 aaKnown RBP11.49□□□□□ -0.57
CDH3-210ENST00000569117 PPP1R2P41236 205 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 EFNA5P52803 228 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 NLRP11P59045 1033 aaKnown RBP11.49□□□□□ -0.57
CDH3-210ENST00000569117 NLRP12P59046 1061 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 PTENP60484 403 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 TYRO3Q06418 890 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 MGAT3Q09327 533 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 LRRC26Q2I0M4 334 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 KIZQ2M2Z5 673 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 DPCR1Q3MIW9 517 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 ZNF720Q7Z2F6 126 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 HAUS6Q7Z4H7 955 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 ZBTB8OSQ8IWT0 167 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 SMYD4Q8IYR2 804 aaPredicted RBP11.49□□□□□ -0.57
CDH3-210ENST00000569117 GLIS3Q8NEA6 775 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 DEPTORQ8TB45 409 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 CAGE1Q8TC20 777 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 KIFC3Q9BVG8 833 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 CCDC113Q9H0I3 377 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 ADAMTS10Q9H324 1103 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 IFT122Q9HBG6 1241 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 SLC39A2Q9NP94 309 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 TBC1D7Q9P0N9 293 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 USTQ9Y2C2 406 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 TRPV2Q9Y5S1 764 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 ZMYM2Q9UBW7 1377 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 LTBP2Q14767 1821 aa11.49□□□□□ -0.57
CDH3-210ENST00000569117 A0A087WZ62 844 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 DENND3A2RUS2 1198 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 DCDC2CA8MYV0 355 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 PPP1R3GB7ZBB8 358 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 M0QZ92 97 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 SRGAP2CP0DJJ0 459 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 MYBP10242 640 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 CRYBB1P53674 252 aaPredicted RBP11.48□□□□□ -0.57
CDH3-210ENST00000569117 ZNF445P59923 1031 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 USP46P62068 366 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 GTF2BQ00403 316 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 TLE2Q04725 743 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 MBTD1Q05BQ5 628 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 KCNA1Q09470 495 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 TMEM62Q0P6H9 643 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 FAM26DQ5JW98 314 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 L1TD1Q5T7N2 865 aaKnown RBP11.48□□□□□ -0.57
CDH3-210ENST00000569117 MAP4K3Q8IVH8 894 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 MYOCDQ8IZQ8 938 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 GUF1Q8N442 669 aaKnown RBP11.48□□□□□ -0.57
CDH3-210ENST00000569117 MLKLQ8NB16 471 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 SCFD1Q8WVM8 642 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 SCLT1Q96NL6 688 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 FDXACB1Q9BRP7 624 aaPredicted RBP11.48□□□□□ -0.57
CDH3-210ENST00000569117 CELF4Q9BZC1 486 aaKnown RBP11.48□□□□□ -0.57
CDH3-210ENST00000569117 PPP1R12CQ9BZL4 782 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 ANO10Q9NW15 660 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 DACH1Q9UI36 760 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 TBX21Q9UL17 535 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 CDY2AQ9Y6F7 541 aa11.48□□□□□ -0.57
CDH3-210ENST00000569117 KIF20AO95235 890 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms