RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 CSPP1Q1MSJ5 1256 aa18.34■□□□□ 0.53
CNEP1R1-210ENST00000568890 HERC4Q5GLZ8 1057 aaPredicted RBP18.34■□□□□ 0.53
CNEP1R1-210ENST00000568890 FAM117BQ6P1L5 589 aa18.34■□□□□ 0.53
CNEP1R1-210ENST00000568890 MYOCDQ8IZQ8 938 aa18.34■□□□□ 0.53
CNEP1R1-210ENST00000568890 TOP1MTQ969P6 601 aa18.34■□□□□ 0.53
CNEP1R1-210ENST00000568890 PYM1Q9BRP8 204 aaKnown RBP18.34■□□□□ 0.53
CNEP1R1-210ENST00000568890 STRA6Q9BX79 667 aa18.34■□□□□ 0.53
CNEP1R1-210ENST00000568890 FTHL17Q9BXU8 183 aa18.34■□□□□ 0.53
CNEP1R1-210ENST00000568890 MAGEF1Q9HAY2 307 aa18.34■□□□□ 0.53
CNEP1R1-210ENST00000568890 USP25Q9UHP3 1055 aa18.34■□□□□ 0.53
CNEP1R1-210ENST00000568890 A0A1B0GUA9 196 aa18.33■□□□□ 0.53
CNEP1R1-210ENST00000568890 DENND3A2RUS2 1198 aa18.33■□□□□ 0.53
CNEP1R1-210ENST00000568890 TBCAO75347 108 aaKnown RBP18.33■□□□□ 0.53
CNEP1R1-210ENST00000568890 RABGGTBP53611 331 aa18.33■□□□□ 0.53
CNEP1R1-210ENST00000568890 PPP4R3CPQ6ZMV5 832 aa18.33■□□□□ 0.53
CNEP1R1-210ENST00000568890 EIF2AQ9BY44 585 aaKnown RBP18.33■□□□□ 0.53
CNEP1R1-210ENST00000568890 TMEM134Q9H6X4 195 aa18.33■□□□□ 0.53
CNEP1R1-210ENST00000568890 CHST12Q9NRB3 414 aa18.33■□□□□ 0.53
CNEP1R1-210ENST00000568890 DACT1Q9NYF0 836 aa18.33■□□□□ 0.53
CNEP1R1-210ENST00000568890 MEIS3P2A8K0S8 358 aa18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 UPP2O95045 317 aa18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 PRKCBP05771 671 aa18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 MYOGP15173 224 aa18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 ATP2A2P16615 1042 aaKnown RBP18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 ATF7P17544 494 aaPredicted RBP18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 PBX2P40425 430 aa18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 EFNA5P52803 228 aa18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 ASIC1P78348 528 aa18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 COASYQ13057 564 aa18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 MAPK6Q16659 721 aa18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 SLC24A5Q71RS6 500 aa18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 ZBTB8OSQ8IWT0 167 aa18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 FAM178BQ8IXR5 827 aa18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 C2orf40Q9H1Z8 148 aa18.33■□□□□ 0.52
CNEP1R1-210ENST00000568890 A0A0U1RQF3 1178 aa18.32■□□□□ 0.52
CNEP1R1-210ENST00000568890 SOX1O00570 391 aaPredicted RBP18.32■□□□□ 0.52
CNEP1R1-210ENST00000568890 PPP1R37O75864 691 aa18.32■□□□□ 0.52
CNEP1R1-210ENST00000568890 ERLIN2O94905 339 aa18.32■□□□□ 0.52
CNEP1R1-210ENST00000568890 ZSCAN20P17040 1043 aaPredicted RBP18.32■□□□□ 0.52
CNEP1R1-210ENST00000568890 IBSPP21815 317 aaPredicted RBP18.32■□□□□ 0.52
CNEP1R1-210ENST00000568890 SMTNP53814 917 aa18.32■□□□□ 0.52
CNEP1R1-210ENST00000568890 DPYDQ12882 1025 aa18.32■□□□□ 0.52
CNEP1R1-210ENST00000568890 EEF1DP3Q658K8 133 aa18.32■□□□□ 0.52
CNEP1R1-210ENST00000568890 KCNN1Q92952 543 aa18.32■□□□□ 0.52
CNEP1R1-210ENST00000568890 TARS2Q9BW92 718 aaKnown RBP18.32■□□□□ 0.52
CNEP1R1-210ENST00000568890 PRMT7Q9NVM4 692 aaPredicted RBP18.32■□□□□ 0.52
CNEP1R1-210ENST00000568890 MYBP10242 640 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 GTF2BQ00403 316 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 PNOCQ13519 176 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 ZBTB45Q96K62 511 aaPredicted RBP18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 TRAIPQ9BWF2 469 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 LRRC27Q9C0I9 530 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 OLFML3Q9NRN5 406 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 TBX20Q9UMR3 447 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 GTPBP6O43824 516 aaPredicted RBP18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 GJB5O95377 273 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 HOXD13P35453 343 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 KCNJ6P48051 423 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 PRPF4BQ13523 1007 aaKnown RBP18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 PCBP1Q15365 356 aaKnown RBP eCLIP18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 TWF2Q6IBS0 349 aaKnown RBP18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 UNC13DQ70J99 1090 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 HERC6Q8IVU3 1022 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 PRIMPOLQ96LW4 560 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 ACO2Q99798 780 aaKnown RBP18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 HAPLN2Q9GZV7 340 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 RNF39Q9H2S5 420 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 PDZD7Q9H5P4 517 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 MRPL44Q9H9J2 332 aaKnown RBP18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 PTPRHQ9HD43 1115 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 HES2Q9Y543 173 aa18.31■□□□□ 0.52
CNEP1R1-210ENST00000568890 TTC3P53804 2025 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 A0A1W2PPC1 479 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 TISP43B9A030 160 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 K7ENM7 598 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 ABLIM1O14639 778 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 EFCAB14O75071 495 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 ARHGEF15O94989 841 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 GATMP50440 423 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 LRIT3Q3SXY7 679 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 ZNF598Q86UK7 904 aaKnown RBP18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 ECHDC2Q86YB7 292 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 CCDC65Q8IXS2 484 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 SMG8Q8ND04 991 aaKnown RBP18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 PHOSPHO2Q8TCD6 241 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 TIGD1Q96MW7 591 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 ST6GALNAC4Q9H4F1 302 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 FAM105AQ9NUU6 356 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 CNTNAP2Q9UHC6 1331 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 PVALEFA0A1B0GWK0 134 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 GAP43P17677 238 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 SARSP49591 514 aaKnown RBP18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 AFF1P51825 1210 aaKnown RBP18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 STK4Q13043 487 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 KMT5BQ4FZB7 885 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 SLC39A4Q6P5W5 647 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 LPPQ93052 612 aa18.3■□□□□ 0.52
CNEP1R1-210ENST00000568890 GBP4Q96PP9 640 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms