RNA–Protein interactions for RNA: ENST00000568743.1

PKM-221, Transcript of pyruvate kinase M1/2, humanhuman

TSL 1 (best)

Gene PKM, Length 580 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKM-221ENST00000568743 DSC3Q14574 896 aa11.14□□□□□ -0.63
PKM-221ENST00000568743 POSTNQ15063 836 aa11.14□□□□□ -0.63
PKM-221ENST00000568743 MAPK6Q16659 721 aa11.14□□□□□ -0.63
PKM-221ENST00000568743 TMEM132AQ24JP5 1023 aa11.14□□□□□ -0.63
PKM-221ENST00000568743 ZC2HC1CQ53FD0 456 aaPredicted RBP11.14□□□□□ -0.63
PKM-221ENST00000568743 TWF2Q6IBS0 349 aaKnown RBP11.14□□□□□ -0.63
PKM-221ENST00000568743 FAM117BQ6P1L5 589 aa11.14□□□□□ -0.63
PKM-221ENST00000568743 CNNM4Q6P4Q7 775 aa11.14□□□□□ -0.63
PKM-221ENST00000568743 UNC13DQ70J99 1090 aa11.14□□□□□ -0.63
PKM-221ENST00000568743 HAUS6Q7Z4H7 955 aa11.14□□□□□ -0.63
PKM-221ENST00000568743 TDHQ8IZJ6 230 aa11.14□□□□□ -0.63
PKM-221ENST00000568743 MYOCDQ8IZQ8 938 aa11.14□□□□□ -0.63
PKM-221ENST00000568743 GLIS3Q8NEA6 775 aa11.14□□□□□ -0.63
PKM-221ENST00000568743 NTPCRQ9BSD7 190 aaKnown RBP11.14□□□□□ -0.63
PKM-221ENST00000568743 FTHL17Q9BXU8 183 aa11.14□□□□□ -0.63
PKM-221ENST00000568743 TSPYL2Q9H2G4 693 aaPredicted RBP11.14□□□□□ -0.63
PKM-221ENST00000568743 MRPL44Q9H9J2 332 aaKnown RBP11.14□□□□□ -0.63
PKM-221ENST00000568743 PHLPP2Q6ZVD8 1323 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 PVALEFA0A1B0GWK0 134 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 BAIAP3O94812 1187 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 UPP2O95045 317 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 GCNT3O95395 438 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 RPN1P04843 607 aaKnown RBP11.13□□□□□ -0.63
PKM-221ENST00000568743 ZSCAN20P17040 1043 aaPredicted RBP11.13□□□□□ -0.63
PKM-221ENST00000568743 ARF4P18085 180 aaPredicted RBP11.13□□□□□ -0.63
PKM-221ENST00000568743 KCNJ6P48051 423 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 DPYDQ12882 1025 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 STRN3Q13033 797 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 PRPF4BQ13523 1007 aaKnown RBP11.13□□□□□ -0.63
PKM-221ENST00000568743 FAM187BQ17R55 369 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 KMT5BQ4FZB7 885 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 NT5DC1Q5TFE4 455 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 RASIP1Q5U651 963 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 FAM109BQ6ICB4 259 aaPredicted RBP11.13□□□□□ -0.63
PKM-221ENST00000568743 KANK3Q6NY19 840 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 GPT2Q8TD30 523 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 TIGD1Q96MW7 591 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 TARS2Q9BW92 718 aaKnown RBP11.13□□□□□ -0.63
PKM-221ENST00000568743 MTIF3Q9H2K0 278 aaKnown RBP11.13□□□□□ -0.63
PKM-221ENST00000568743 IKZF4Q9H2S9 585 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 TMEM134Q9H6X4 195 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 EXOC1Q9NV70 894 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 PRMT7Q9NVM4 692 aaPredicted RBP11.13□□□□□ -0.63
PKM-221ENST00000568743 SEL1LQ9UBV2 794 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 SLC4A7Q9Y6M7 1214 aa11.13□□□□□ -0.63
PKM-221ENST00000568743 CNTNAP2Q9UHC6 1331 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 GRXCR1A8MXD5 290 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 H0YCG3 227 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 ACKR2O00590 384 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 EFCAB14O75071 495 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 PRPF6O94906 941 aaKnown RBP11.12□□□□□ -0.63
PKM-221ENST00000568743 NPTXRO95502 500 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 MCM4P33991 863 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 GTF2BQ00403 316 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 EHHADHQ08426 723 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 KCNA1Q09470 495 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 CAMK4Q16566 473 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 FAM26FQ5R3K3 315 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 UBXN11Q5T124 520 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 ATF7IP2Q5U623 682 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 EEF1DP3Q658K8 133 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 NOTUMQ6P988 496 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 ZNF720Q7Z2F6 126 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 RNF169Q8NCN4 708 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 BICD1Q96G01 975 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 ZBTB45Q96K62 511 aaPredicted RBP11.12□□□□□ -0.63
PKM-221ENST00000568743 PRIMPOLQ96LW4 560 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 EIF2AQ9BY44 585 aaKnown RBP11.12□□□□□ -0.63
PKM-221ENST00000568743 MRPL4Q9BYD3 311 aaKnown RBP11.12□□□□□ -0.63
PKM-221ENST00000568743 PDZD7Q9H5P4 517 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 SLC39A2Q9NP94 309 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 OLFML3Q9NRN5 406 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 RGS18Q9NS28 235 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 TBX20Q9UMR3 447 aa11.12□□□□□ -0.63
PKM-221ENST00000568743 TISP43B9A030 160 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 C9IYK1 514 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 N4BP3O15049 544 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 PPP1R37O75864 691 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 AMHP03971 560 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 MYL1P05976 194 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 HARSP12081 509 aaKnown RBP11.11□□□□□ -0.63
PKM-221ENST00000568743 ATP2A2P16615 1042 aaKnown RBP11.11□□□□□ -0.63
PKM-221ENST00000568743 AXLP30530 894 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 SARSP49591 514 aaKnown RBP11.11□□□□□ -0.63
PKM-221ENST00000568743 RABGGTBP53611 331 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 NCBP1Q09161 790 aaKnown RBP11.11□□□□□ -0.63
PKM-221ENST00000568743 STK4Q13043 487 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 PCBP1Q15365 356 aaKnown RBP eCLIP11.11□□□□□ -0.63
PKM-221ENST00000568743 SLC24A5Q71RS6 500 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 ZBTB33Q86T24 672 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 ECHDC2Q86YB7 292 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 LPPQ93052 612 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 CCDC34Q96HJ3 373 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 ACO2Q99798 780 aaKnown RBP11.11□□□□□ -0.63
PKM-221ENST00000568743 STRA6Q9BX79 667 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 ST6GALNAC4Q9H4F1 302 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 CHST12Q9NRB3 414 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 C1orf112Q9NSG2 853 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 FAM105AQ9NUU6 356 aa11.11□□□□□ -0.63
PKM-221ENST00000568743 ANKFY1Q9P2R3 1169 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms