RNA–Protein interactions for RNA: ENST00000568586.5

RAB40C-211, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 648 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-211ENST00000568586 TBC1D13Q9NVG8 400 aa32.59■■■□□ 2.81
RAB40C-211ENST00000568586 PUF60Q9UHX1 559 aaKnown RBP32.59■■■□□ 2.81
RAB40C-211ENST00000568586 KIAA1024Q9UPX6 916 aa32.59■■■□□ 2.81
RAB40C-211ENST00000568586 GRXCR2A6NFK2 248 aa32.58■■■□□ 2.81
RAB40C-211ENST00000568586 GTF2F1P35269 517 aaKnown RBP eCLIP32.58■■■□□ 2.814e-9■■■■■ 33
RAB40C-211ENST00000568586 EFHBQ8N7U6 833 aa32.58■■■□□ 2.81
RAB40C-211ENST00000568586 SMG8Q8ND04 991 aaKnown RBP32.58■■■□□ 2.81
RAB40C-211ENST00000568586 CSRNP2Q9H175 543 aa32.58■■■□□ 2.81
RAB40C-211ENST00000568586 H3BQ06 376 aaPredicted RBP32.57■■■□□ 2.8
RAB40C-211ENST00000568586 INPPL1O15357 1258 aa32.57■■■□□ 2.8
RAB40C-211ENST00000568586 ARF4P18085 180 aaPredicted RBP32.57■■■□□ 2.8
RAB40C-211ENST00000568586 BCAR1P56945 870 aa32.57■■■□□ 2.8
RAB40C-211ENST00000568586 PPP4R3CPQ6ZMV5 832 aa32.57■■■□□ 2.8
RAB40C-211ENST00000568586 SNX29Q8TEQ0 813 aa32.57■■■□□ 2.8
RAB40C-211ENST00000568586 MMTAG2Q9BU76 263 aaKnown RBP32.57■■■□□ 2.8
RAB40C-211ENST00000568586 BHMT2Q9H2M3 363 aa32.57■■■□□ 2.8
RAB40C-211ENST00000568586 PBX3P40426 434 aa32.56■■■□□ 2.8
RAB40C-211ENST00000568586 ALDH7A1P49419 539 aaKnown RBP32.56■■■□□ 2.8
RAB40C-211ENST00000568586 KRT17Q04695 432 aa32.56■■■□□ 2.8
RAB40C-211ENST00000568586 FAM187BQ17R55 369 aa32.56■■■□□ 2.8
RAB40C-211ENST00000568586 LONRF3Q496Y0 759 aa32.56■■■□□ 2.8
RAB40C-211ENST00000568586 KRT79Q5XKE5 535 aa32.56■■■□□ 2.8
RAB40C-211ENST00000568586 ARL6IP4Q66PJ3 421 aaKnown RBP32.56■■■□□ 2.8
RAB40C-211ENST00000568586 PTCRAQ6ISU1 281 aaPredicted RBP32.56■■■□□ 2.8
RAB40C-211ENST00000568586 MAEAQ7L5Y9 396 aa32.56■■■□□ 2.8
RAB40C-211ENST00000568586 PRIMPOLQ96LW4 560 aa32.56■■■□□ 2.8
RAB40C-211ENST00000568586 FZD8Q9H461 694 aa32.56■■■□□ 2.8
RAB40C-211ENST00000568586 RSAD1Q9HA92 442 aa32.56■■■□□ 2.8
RAB40C-211ENST00000568586 UBN1Q9NPG3 1134 aa32.56■■■□□ 2.8
RAB40C-211ENST00000568586 DDX19AQ9NUU7 478 aaKnown RBP32.56■■■□□ 2.8
RAB40C-211ENST00000568586 PCDHGC5Q9Y5F6 944 aa32.56■■■□□ 2.8
RAB40C-211ENST00000568586 A0A1B0GUA9 196 aa32.55■■■□□ 2.8
RAB40C-211ENST00000568586 DLX2Q07687 328 aaPredicted RBP32.55■■■□□ 2.8
RAB40C-211ENST00000568586 KCTD17Q8N5Z5 321 aa32.55■■■□□ 2.8
RAB40C-211ENST00000568586 BSNDQ8WZ55 320 aa32.55■■■□□ 2.8
RAB40C-211ENST00000568586 EIF2AQ9BY44 585 aaKnown RBP32.55■■■□□ 2.8
RAB40C-211ENST00000568586 NRDE2Q9H7Z3 1164 aa32.55■■■□□ 2.8
RAB40C-211ENST00000568586 NGRNQ9NPE2 291 aaKnown RBP32.55■■■□□ 2.8
RAB40C-211ENST00000568586 KANSL3Q9P2N6 904 aa32.55■■■□□ 2.8
RAB40C-211ENST00000568586 IPPQ9Y573 584 aa32.55■■■□□ 2.8
RAB40C-211ENST00000568586 PP2D1A8MPX8 630 aa32.54■■■□□ 2.8
RAB40C-211ENST00000568586 CSPG5O95196 566 aa32.54■■■□□ 2.8
RAB40C-211ENST00000568586 HYIQ5T013 277 aa32.54■■■□□ 2.8
RAB40C-211ENST00000568586 MICAL1Q8TDZ2 1067 aa32.54■■■□□ 2.8
RAB40C-211ENST00000568586 CPB2Q96IY4 423 aa32.54■■■□□ 2.8
RAB40C-211ENST00000568586 CDCA3Q99618 268 aaPredicted RBP32.54■■■□□ 2.8
RAB40C-211ENST00000568586 IGFLR1Q9H665 355 aa32.54■■■□□ 2.8
RAB40C-211ENST00000568586 DNM3Q9UQ16 869 aa32.54■■■□□ 2.8
RAB40C-211ENST00000568586 FSD2A1L4K1 749 aa32.53■■■□□ 2.8
RAB40C-211ENST00000568586 LRRIQ4A6NIV6 560 aa32.53■■■□□ 2.8
RAB40C-211ENST00000568586 LINC01565O15544 149 aa32.53■■■□□ 2.8
RAB40C-211ENST00000568586 TBX10O75333 385 aa32.53■■■□□ 2.8
RAB40C-211ENST00000568586 EYA4O95677 639 aa32.53■■■□□ 2.8
RAB40C-211ENST00000568586 NAMPTP43490 491 aa32.53■■■□□ 2.8
RAB40C-211ENST00000568586 NRIP1P48552 1158 aa32.53■■■□□ 2.8
RAB40C-211ENST00000568586 BRAPQ7Z569 592 aa32.53■■■□□ 2.8
RAB40C-211ENST00000568586 C2orf40Q9H1Z8 148 aa32.53■■■□□ 2.8
RAB40C-211ENST00000568586 TLE6Q9H808 572 aa32.53■■■□□ 2.8
RAB40C-211ENST00000568586 PRMT7Q9NVM4 692 aaPredicted RBP32.53■■■□□ 2.8
RAB40C-211ENST00000568586 B4GALT5O43286 388 aa32.52■■■□□ 2.8
RAB40C-211ENST00000568586 GALTP07902 379 aa32.52■■■□□ 2.8
RAB40C-211ENST00000568586 CDC25AP30304 524 aa32.52■■■□□ 2.8
RAB40C-211ENST00000568586 AFF1P51825 1210 aaKnown RBP32.52■■■□□ 2.8
RAB40C-211ENST00000568586 DUSP6Q16828 381 aa32.52■■■□□ 2.8
RAB40C-211ENST00000568586 FAM178BQ8IXR5 827 aa32.52■■■□□ 2.8
RAB40C-211ENST00000568586 URGCPQ8TCY9 931 aa32.52■■■□□ 2.8
RAB40C-211ENST00000568586 KIFAP3Q92845 792 aa32.52■■■□□ 2.8
RAB40C-211ENST00000568586 MSLNLQ96KJ4 702 aa32.52■■■□□ 2.8
RAB40C-211ENST00000568586 DAXXQ9UER7 740 aaPredicted RBP32.52■■■□□ 2.8
RAB40C-211ENST00000568586 INPP5FQ9Y2H2 1132 aa32.52■■■□□ 2.8
RAB40C-211ENST00000568586 ITGA4P13612 1032 aa32.51■■■□□ 2.79
RAB40C-211ENST00000568586 PDCP20941 246 aa32.51■■■□□ 2.79
RAB40C-211ENST00000568586 PPP2R5AQ15172 486 aa32.51■■■□□ 2.79
RAB40C-211ENST00000568586 ZBTB8OSQ8IWT0 167 aa32.51■■■□□ 2.79
RAB40C-211ENST00000568586 INTS4Q96HW7 963 aaKnown RBP32.51■■■□□ 2.79
RAB40C-211ENST00000568586 TCF25Q9BQ70 676 aa32.51■■■□□ 2.79
RAB40C-211ENST00000568586 CCDC113Q9H0I3 377 aa32.51■■■□□ 2.79
RAB40C-211ENST00000568586 RNF39Q9H2S5 420 aa32.51■■■□□ 2.79
RAB40C-211ENST00000568586 CLEC1BQ9P126 229 aa32.51■■■□□ 2.79
RAB40C-211ENST00000568586 FAM50BQ9Y247 325 aa32.51■■■□□ 2.79
RAB40C-211ENST00000568586 B4GALT3O60512 393 aa32.5■■■□□ 2.79
RAB40C-211ENST00000568586 ZC3H11AO75152 810 aaKnown RBP eCLIP32.5■■■□□ 2.79
RAB40C-211ENST00000568586 GLP2RO95838 553 aa32.5■■■□□ 2.79
RAB40C-211ENST00000568586 IL9P15248 144 aa32.5■■■□□ 2.79
RAB40C-211ENST00000568586 KCNC3Q14003 757 aa32.5■■■□□ 2.79
RAB40C-211ENST00000568586 SLC27A1Q6PCB7 646 aa32.5■■■□□ 2.79
RAB40C-211ENST00000568586 EP400NLQ6ZTU2 488 aa32.5■■■□□ 2.79
RAB40C-211ENST00000568586 RBM23Q86U06 439 aaKnown RBP32.5■■■□□ 2.79
RAB40C-211ENST00000568586 TMEM173Q86WV6 379 aaPredicted RBP32.5■■■□□ 2.79
RAB40C-211ENST00000568586 ZNF280BQ86YH2 543 aa32.5■■■□□ 2.79
RAB40C-211ENST00000568586 IGSF21Q96ID5 467 aa32.5■■■□□ 2.79
RAB40C-211ENST00000568586 ZMYM2Q9UBW7 1377 aa32.49■■■□□ 2.79
RAB40C-211ENST00000568586 NT5C1B-RDH14C9J2C7 533 aa32.49■■■□□ 2.79
RAB40C-211ENST00000568586 E9PMD0 336 aa32.49■■■□□ 2.79
RAB40C-211ENST00000568586 DDHD2O94830 711 aa32.49■■■□□ 2.79
RAB40C-211ENST00000568586 RNASELQ05823 741 aaKnown RBP32.49■■■□□ 2.79
RAB40C-211ENST00000568586 TMEM184AQ6ZMB5 413 aa32.49■■■□□ 2.79
RAB40C-211ENST00000568586 MRPL43Q8N983 215 aaKnown RBP32.49■■■□□ 2.79
RAB40C-211ENST00000568586 TMEM169Q96HH4 297 aa32.49■■■□□ 2.79
RAB40C-211ENST00000568586 TMEM175Q9BSA9 504 aa32.49■■■□□ 2.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms