RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 NAMPTP43490 491 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 ARHGAP1Q07960 439 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 ACVR2BQ13705 512 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 MYBPC2Q14324 1141 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 TARBP2Q15633 366 aaKnown RBP7.69□□□□□ -1.18
SMG1-215ENST00000568239 ZNF569Q5MCW4 686 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 CCDC122Q5T0U0 273 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 CCDC170Q8IYT3 715 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 RNF149Q8NC42 400 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 HVCN1Q96D96 273 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 NLRP4Q96MN2 994 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 WDR24Q96S15 920 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 PPP1R16BQ96T49 567 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 POP1Q99575 1024 aaKnown RBP7.69□□□□□ -1.18
SMG1-215ENST00000568239 TCHPQ9BT92 498 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 EDEM3Q9BZQ6 932 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 ABHD16BQ9H3Z7 469 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 KCNG1Q9UIX4 513 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 MAFO75444 373 aaPredicted RBP7.69□□□□□ -1.18
SMG1-215ENST00000568239 LGR5O75473 907 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 LGALS2P05162 132 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 ADRB2P07550 413 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 PNMA6AP0CW24 399 aaPredicted RBP7.69□□□□□ -1.18
SMG1-215ENST00000568239 KIF11P52732 1056 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 GFPT1Q06210 699 aaPredicted RBP7.69□□□□□ -1.18
SMG1-215ENST00000568239 KLHL30Q0D2K2 578 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 CAPSQ13938 189 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 ASIC2Q16515 512 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 BRDTQ58F21 947 aaPredicted RBP7.69□□□□□ -1.18
SMG1-215ENST00000568239 EFCAB12Q6NXP0 572 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 SLC39A4Q6P5W5 647 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 TAS1R3Q7RTX0 852 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 IFNL1Q8IU54 200 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 PSPC1Q8WXF1 523 aaKnown RBP7.69□□□□□ -1.18
SMG1-215ENST00000568239 TSC1Q92574 1164 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 CEP89Q96ST8 783 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 TARS2Q9BW92 718 aaKnown RBP7.69□□□□□ -1.18
SMG1-215ENST00000568239 NUCKS1Q9H1E3 243 aaKnown RBP7.69□□□□□ -1.18
SMG1-215ENST00000568239 GANQ9H2C0 597 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 REXO2Q9Y3B8 237 aaKnown RBP7.69□□□□□ -1.18
SMG1-215ENST00000568239 KAT6AQ92794 2004 aa7.69□□□□□ -1.18
SMG1-215ENST00000568239 SLC15A5A6NIM6 579 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 HBP1O60381 514 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 LRRN2O75325 713 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 TUBB4AP04350 444 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 SMPD1P17405 629 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 ACOT2P49753 483 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 CLCN3P51790 818 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 SNRPFP62306 86 aaKnown RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 PPP3CAQ08209 521 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 ARHGAP44Q17R89 818 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 ZNF467Q7Z7K2 595 aaPredicted RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 C12orf56Q8IXR9 622 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 GPD1LQ8N335 351 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 MYRIPQ8NFW9 859 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 OR6J1Q8NGC5 347 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 ZBTB45Q96K62 511 aaPredicted RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 IFIH1Q9BYX4 1025 aaKnown RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 ZFYVE28Q9HCC9 887 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 PLCB1Q9NQ66 1216 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 SUCLA2Q9P2R7 463 aaPredicted RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 MACROD2A1Z1Q3 448 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 EIF3CLB5ME19 914 aaKnown RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 TNPO2O14787 897 aaKnown RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 DYNC1LI2O43237 492 aaPredicted RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 TLR2O60603 784 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 SERPING1P05155 500 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 INSRRP14616 1297 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 HNRNPH3P31942 346 aaKnown RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 CYP2C19P33261 490 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 SLC26A2P50443 739 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 MXI1P50539 228 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 MAP2K1Q02750 393 aaPredicted RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 LAMTOR4Q0VGL1 99 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 MAP2K5Q13163 448 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 CRHR2Q13324 411 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 IER5Q5VY09 327 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 MAMDC4Q6UXC1 1216 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 PPTC7Q8NI37 304 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 PLEKHO2Q8TD55 490 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 PPP1R13LQ8WUF5 828 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 TCP11Q8WWU5 503 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 JAKMIP2Q96AA8 810 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 ZIC5Q96T25 663 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 EIF3CQ99613 913 aaKnown RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 INTS2Q9H0H0 1204 aaKnown RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 HAUS4Q9H6D7 363 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 DNAJC12Q9UKB3 198 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 BRCA2P51587 3418 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 FAM170AA1A519 330 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 GTPBP10A4D1E9 387 aaKnown RBP7.68□□□□□ -1.18
SMG1-215ENST00000568239 ZNF233A6NK53 670 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 ZBTB42B2RXF5 422 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 INO80B-WBP1J3KQ70 363 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 KRT86O43790 486 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 ADCY3O60266 1144 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 SLC10A3P09131 477 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 ABCD1P33897 745 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 CDK17Q00537 523 aa7.68□□□□□ -1.18
SMG1-215ENST00000568239 TNFAIP2Q03169 654 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms