RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 TBC1D7Q9P0N9 293 aa19.82■□□□□ 0.76
COMMD4-222ENST00000568034 CXXC1Q9P0U4 656 aaPredicted RBP19.82■□□□□ 0.76
COMMD4-222ENST00000568034 KCNG1Q9UIX4 513 aa19.82■□□□□ 0.76
COMMD4-222ENST00000568034 USP20Q9Y2K6 914 aa19.82■□□□□ 0.76
COMMD4-222ENST00000568034 CNTNAP2Q9UHC6 1331 aa19.81■□□□□ 0.76
COMMD4-222ENST00000568034 RANBP2P49792 3224 aaKnown RBP19.81■□□□□ 0.76
COMMD4-222ENST00000568034 PTPRSQ13332 1948 aa19.81■□□□□ 0.76
COMMD4-222ENST00000568034 ACKR2O00590 384 aa19.81■□□□□ 0.76
COMMD4-222ENST00000568034 BAIAP3O94812 1187 aa19.81■□□□□ 0.76
COMMD4-222ENST00000568034 RPN1P04843 607 aaKnown RBP19.81■□□□□ 0.76
COMMD4-222ENST00000568034 ARF4P18085 180 aaPredicted RBP19.81■□□□□ 0.76
COMMD4-222ENST00000568034 GTF2BQ00403 316 aa19.81■□□□□ 0.76
COMMD4-222ENST00000568034 SHHQ15465 462 aa19.81■□□□□ 0.76
COMMD4-222ENST00000568034 MAPK6Q16659 721 aa19.81■□□□□ 0.76
COMMD4-222ENST00000568034 KMT5BQ4FZB7 885 aa19.81■□□□□ 0.76
COMMD4-222ENST00000568034 NT5DC1Q5TFE4 455 aa19.81■□□□□ 0.76
COMMD4-222ENST00000568034 SPATA20Q8TB22 786 aa19.81■□□□□ 0.76
COMMD4-222ENST00000568034 ERCC4Q92889 916 aaPredicted RBP19.81■□□□□ 0.76
COMMD4-222ENST00000568034 PRIMPOLQ96LW4 560 aa19.81■□□□□ 0.76
COMMD4-222ENST00000568034 FTHL17Q9BXU8 183 aa19.81■□□□□ 0.76
COMMD4-222ENST00000568034 UBE2OQ9C0C9 1292 aaKnown RBP19.81■□□□□ 0.76
COMMD4-222ENST00000568034 TSPYL2Q9H2G4 693 aaPredicted RBP19.81■□□□□ 0.76
COMMD4-222ENST00000568034 ABHD14A-ACY1A0A1B0GW23 586 aa19.8■□□□□ 0.76
COMMD4-222ENST00000568034 K7ERI5 159 aa19.8■□□□□ 0.76
COMMD4-222ENST00000568034 MYBP10242 640 aa19.8■□□□□ 0.76
COMMD4-222ENST00000568034 ACTN1P12814 892 aa19.8■□□□□ 0.76
COMMD4-222ENST00000568034 WDR5P61964 334 aaKnown RBP19.8■□□□□ 0.76
COMMD4-222ENST00000568034 ZC2HC1CQ53FD0 456 aaPredicted RBP19.8■□□□□ 0.76
COMMD4-222ENST00000568034 FAM26FQ5R3K3 315 aa19.8■□□□□ 0.76
COMMD4-222ENST00000568034 UBXN11Q5T124 520 aa19.8■□□□□ 0.76
COMMD4-222ENST00000568034 CHRDL2Q6WN34 429 aa19.8■□□□□ 0.76
COMMD4-222ENST00000568034 LIN28BQ6ZN17 250 aaKnown RBP eCLIP19.8■□□□□ 0.76
COMMD4-222ENST00000568034 CCDC34Q96HJ3 373 aa19.8■□□□□ 0.76
COMMD4-222ENST00000568034 CPB2Q96IY4 423 aa19.8■□□□□ 0.76
COMMD4-222ENST00000568034 MRPL44Q9H9J2 332 aaKnown RBP19.8■□□□□ 0.76
COMMD4-222ENST00000568034 PIN4Q9Y237 131 aaKnown RBP19.8■□□□□ 0.76
COMMD4-222ENST00000568034 H0YCG3 227 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 ENPP3O14638 875 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 ERLIN2O94905 339 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 RHOBTB3O94955 611 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 AXLP30530 894 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 IKBKEQ14164 716 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 FAM43BQ6ZT52 329 aaPredicted RBP19.79■□□□□ 0.76
COMMD4-222ENST00000568034 EPM2AIP1Q7L775 607 aaPredicted RBP19.79■□□□□ 0.76
COMMD4-222ENST00000568034 MAP4K3Q8IVH8 894 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 KIAA0895Q8NCT3 520 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 SLC17A8Q8NDX2 589 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 ADAM2Q99965 735 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 CLSTN2Q9H4D0 955 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 CHST12Q9NRB3 414 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 RGS18Q9NS28 235 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 TBX20Q9UMR3 447 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 PCDHA5Q9Y5H7 936 aa19.79■□□□□ 0.76
COMMD4-222ENST00000568034 TTC3P53804 2025 aa19.78■□□□□ 0.76
COMMD4-222ENST00000568034 A0A1B0GUA9 196 aa19.78■□□□□ 0.76
COMMD4-222ENST00000568034 C9IYK1 514 aa19.78■□□□□ 0.76
COMMD4-222ENST00000568034 GCNT3O95395 438 aa19.78■□□□□ 0.76
COMMD4-222ENST00000568034 SCP2P22307 547 aa19.78■□□□□ 0.76
COMMD4-222ENST00000568034 SARSP49591 514 aaKnown RBP19.78■□□□□ 0.76
COMMD4-222ENST00000568034 DEFB103AP81534 67 aa19.78■□□□□ 0.76
COMMD4-222ENST00000568034 KCNA1Q09470 495 aa19.78■□□□□ 0.76
COMMD4-222ENST00000568034 STK4Q13043 487 aa19.78■□□□□ 0.76
COMMD4-222ENST00000568034 PRPF4BQ13523 1007 aaKnown RBP19.78■□□□□ 0.76
COMMD4-222ENST00000568034 KCNB1Q14721 858 aa19.78■□□□□ 0.76
COMMD4-222ENST00000568034 CDR2LQ86X02 465 aaPredicted RBP19.78■□□□□ 0.76
COMMD4-222ENST00000568034 HVCN1Q96D96 273 aa19.78■□□□□ 0.76
COMMD4-222ENST00000568034 ACO2Q99798 780 aaKnown RBP19.78■□□□□ 0.76
COMMD4-222ENST00000568034 TARS2Q9BW92 718 aaKnown RBP19.78■□□□□ 0.76
COMMD4-222ENST00000568034 TRAIPQ9BWF2 469 aa19.78■□□□□ 0.76
COMMD4-222ENST00000568034 PDZD7Q9H5P4 517 aa19.78■□□□□ 0.76
COMMD4-222ENST00000568034 EXOC1Q9NV70 894 aa19.78■□□□□ 0.76
COMMD4-222ENST00000568034 ABLIM1O14639 778 aa19.77■□□□□ 0.76
COMMD4-222ENST00000568034 EFCAB14O75071 495 aa19.77■□□□□ 0.76
COMMD4-222ENST00000568034 PIGRP01833 764 aa19.77■□□□□ 0.76
COMMD4-222ENST00000568034 PROZP22891 400 aa19.77■□□□□ 0.76
COMMD4-222ENST00000568034 HOXD13P35453 343 aa19.77■□□□□ 0.76
COMMD4-222ENST00000568034 L1TD1Q5T7N2 865 aaKnown RBP19.77■□□□□ 0.76
COMMD4-222ENST00000568034 EEF1DP3Q658K8 133 aa19.77■□□□□ 0.76
COMMD4-222ENST00000568034 NOTUMQ6P988 496 aa19.77■□□□□ 0.76
COMMD4-222ENST00000568034 CRIPAKQ8N1N5 446 aa19.77■□□□□ 0.76
COMMD4-222ENST00000568034 CCDC51Q96ER9 411 aa19.77■□□□□ 0.76
COMMD4-222ENST00000568034 MRPL4Q9BYD3 311 aaKnown RBP19.77■□□□□ 0.76
COMMD4-222ENST00000568034 IKZF4Q9H2S9 585 aa19.77■□□□□ 0.76
COMMD4-222ENST00000568034 PTPRHQ9HD43 1115 aa19.77■□□□□ 0.76
COMMD4-222ENST00000568034 SLC39A2Q9NP94 309 aa19.77■□□□□ 0.76
COMMD4-222ENST00000568034 COL4A6Q14031 1691 aa19.76■□□□□ 0.75
COMMD4-222ENST00000568034 ZMYM2Q9UBW7 1377 aa19.76■□□□□ 0.75
COMMD4-222ENST00000568034 PRPF6O94906 941 aaKnown RBP19.76■□□□□ 0.75
COMMD4-222ENST00000568034 ZSCAN20P17040 1043 aaPredicted RBP19.76■□□□□ 0.75
COMMD4-222ENST00000568034 ATF7P17544 494 aaPredicted RBP19.76■□□□□ 0.75
COMMD4-222ENST00000568034 FAM189BP81408 668 aa19.76■□□□□ 0.75
COMMD4-222ENST00000568034 ALCAMQ13740 583 aa19.76■□□□□ 0.75
COMMD4-222ENST00000568034 CAMK4Q16566 473 aa19.76■□□□□ 0.75
COMMD4-222ENST00000568034 ATF7IP2Q5U623 682 aa19.76■□□□□ 0.75
COMMD4-222ENST00000568034 SLC39A4Q6P5W5 647 aa19.76■□□□□ 0.75
COMMD4-222ENST00000568034 SCFD1Q8WVM8 642 aa19.76■□□□□ 0.75
COMMD4-222ENST00000568034 RNPC3Q96LT9 517 aaKnown RBP19.76■□□□□ 0.75
COMMD4-222ENST00000568034 EIF2AQ9BY44 585 aaKnown RBP19.76■□□□□ 0.75
COMMD4-222ENST00000568034 C1orf112Q9NSG2 853 aa19.76■□□□□ 0.75
COMMD4-222ENST00000568034 HOOK1Q9UJC3 728 aaKnown RBP19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms