RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 BCORQ6W2J9 1755 aa6.21□□□□□ -1.42
CAPN3-217ENST00000567817 COL11A2P13942 1736 aaPredicted RBP6.2□□□□□ -1.42
CAPN3-217ENST00000567817 GRM8O00222 908 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 LETM1O95202 739 aaPredicted RBP6.2□□□□□ -1.42
CAPN3-217ENST00000567817 IFIT2P09913 472 aaKnown RBP6.2□□□□□ -1.42
CAPN3-217ENST00000567817 PABPC1P11940 636 aaKnown RBP6.2□□□□□ -1.42
CAPN3-217ENST00000567817 ZKSCAN1P17029 563 aaPredicted RBP6.2□□□□□ -1.42
CAPN3-217ENST00000567817 EIF2S2P20042 333 aaKnown RBP6.2□□□□□ -1.42
CAPN3-217ENST00000567817 PSMA5P28066 241 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 LIMS1P48059 325 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 RASA3Q14644 834 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 ANKRD1Q15327 319 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 CST9Q5W186 159 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 NSMFQ6X4W1 530 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 USP53Q70EK8 1073 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 SPATC1Q76KD6 591 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 B3GNT8Q7Z7M8 397 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 CNBD1Q8NA66 436 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 FAM184AQ8NB25 1140 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 DCAF4Q8WV16 495 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 OSBP2Q969R2 916 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 CHMP4CQ96CF2 233 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 CHAMP1Q96JM3 812 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 PPP1R9BQ96SB3 815 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 PSMD1Q99460 953 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 ZFYVE21Q9BQ24 234 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 BCAS3Q9H6U6 928 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 DIAPH3Q9NSV4 1193 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 LMBRD1Q9NUN5 540 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 KDM3BQ7LBC6 1761 aa6.2□□□□□ -1.42
CAPN3-217ENST00000567817 ADAMTS20P59510 1910 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 CUL9Q8IWT3 2517 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 NPHP1O15259 732 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 CELF2O95319 508 aaKnown RBP6.19□□□□□ -1.42
CAPN3-217ENST00000567817 NBPF7P0C2Y1 421 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-217ENST00000567817 CYP19A1P11511 503 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-217ENST00000567817 NPR1P16066 1061 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 MCM5P33992 734 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 IARSP41252 1262 aaKnown RBP6.19□□□□□ -1.42
CAPN3-217ENST00000567817 MC3RP41968 323 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 FXR1P51114 621 aaKnown RBP eCLIP6.19□□□□□ -1.42
CAPN3-217ENST00000567817 FOXO4P98177 505 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 CACNB2Q08289 660 aaPredicted RBP6.19□□□□□ -1.42
CAPN3-217ENST00000567817 G3BP1Q13283 466 aaKnown RBP eCLIP6.19□□□□□ -1.42
CAPN3-217ENST00000567817 EMC4Q5J8M3 183 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 VPS53Q5VIR6 699 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 PRR5LQ6MZQ0 368 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 DPH6Q7L8W6 267 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 MIB1Q86YT6 1006 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 PHF20Q9BVI0 1012 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 EPB41L1Q9H4G0 881 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 ADARB2Q9NS39 739 aaKnown RBP6.19□□□□□ -1.42
CAPN3-217ENST00000567817 CLDND1Q9NY35 253 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 HMG20BQ9P0W2 317 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 LIMCH1Q9UPQ0 1083 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 ZNF652Q9Y2D9 606 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 MAP3K2Q9Y2U5 619 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 PMF1-BGLAPU3KQ54 211 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 SCN7AQ01118 1682 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 ANKRD31Q8N7Z5 1873 aa6.19□□□□□ -1.42
CAPN3-217ENST00000567817 MRC1P22897 1456 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 ADCY3O60266 1144 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 STARD3NLO95772 234 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 PDCP20941 246 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 ALDH1B1P30837 517 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 SSRP1Q08945 709 aaKnown RBP6.18□□□□□ -1.42
CAPN3-217ENST00000567817 IFRD2Q12894 506 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-217ENST00000567817 KRT32Q14532 448 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 NTRK3Q16288 839 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 ZSCAN23Q3MJ62 389 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 YOD1Q5VVQ6 348 aaPredicted RBP6.18□□□□□ -1.42
CAPN3-217ENST00000567817 ZNF790Q6PG37 636 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 ETV3LQ6ZN32 361 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 TTC5Q8N0Z6 440 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 LINC01356Q8N9X3 169 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 SREK1Q8WXA9 508 aaKnown RBP6.18□□□□□ -1.42
CAPN3-217ENST00000567817 MKL1Q969V6 931 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 DEPDC7Q96QD5 511 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 SLC52A2Q9HAB3 445 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 RAPGEFL1Q9UHV5 662 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 PALD1Q9ULE6 856 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 SLX4Q8IY92 1834 aa6.18□□□□□ -1.42
CAPN3-217ENST00000567817 KLRG2A4D1S0 409 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-217ENST00000567817 HGSO14964 777 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-217ENST00000567817 DGKIO75912 1065 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 PLA2G1BP04054 148 aaKnown RBP6.17□□□□□ -1.42
CAPN3-217ENST00000567817 SNRPA1P09661 255 aaKnown RBP6.17□□□□□ -1.42
CAPN3-217ENST00000567817 KIZQ2M2Z5 673 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 LRSAM1Q6UWE0 723 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 MILR1Q7Z6M3 343 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 ZSCAN30Q86W11 494 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 DNAJC10Q8IXB1 793 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 ZGPATQ8N5A5 531 aaKnown RBP6.17□□□□□ -1.42
CAPN3-217ENST00000567817 ZBTB38Q8NAP3 1195 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-217ENST00000567817 SMARCC2Q8TAQ2 1214 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 FNIP1Q8TF40 1166 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 TEX13AQ9BXU3 409 aaPredicted RBP6.17□□□□□ -1.42
CAPN3-217ENST00000567817 LSG1Q9H089 658 aaKnown RBP6.17□□□□□ -1.42
CAPN3-217ENST00000567817 VPS33BQ9H267 617 aa6.17□□□□□ -1.42
CAPN3-217ENST00000567817 ALDH8A1Q9H2A2 487 aaPredicted RBP6.17□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms