RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.23■□□□□ 0.672e-6■■□□□ 14.2
CMTM3-214ENST00000567572 EPB41L5Q9HCM4 733 aa19.23■□□□□ 0.67
CMTM3-214ENST00000567572 BTBD7Q9P203 1132 aa19.23■□□□□ 0.67
CMTM3-214ENST00000567572 TTC7AQ9ULT0 858 aaPredicted RBP19.23■□□□□ 0.67
CMTM3-214ENST00000567572 KCNH4Q9UQ05 1017 aa19.23■□□□□ 0.67
CMTM3-214ENST00000567572 WDR64B1ANS9 1081 aa19.22■□□□□ 0.67
CMTM3-214ENST00000567572 BHMG1C9JSJ3 638 aaPredicted RBP19.22■□□□□ 0.67
CMTM3-214ENST00000567572 DDX3XO00571 662 aaKnown RBP eCLIP19.22■□□□□ 0.672e-10■■■□□ 18.2
CMTM3-214ENST00000567572 STAM2O75886 525 aa19.22■□□□□ 0.67
CMTM3-214ENST00000567572 ZBTB48P10074 688 aaPredicted RBP19.22■□□□□ 0.67
CMTM3-214ENST00000567572 SNRPFP62306 86 aaKnown RBP19.22■□□□□ 0.67
CMTM3-214ENST00000567572 KCNA1Q09470 495 aa19.22■□□□□ 0.67
CMTM3-214ENST00000567572 MAPK7Q13164 816 aa19.22■□□□□ 0.67
CMTM3-214ENST00000567572 ENOX2Q16206 610 aaKnown RBP19.22■□□□□ 0.67
CMTM3-214ENST00000567572 ODR4Q5SWX8 454 aa19.22■□□□□ 0.67
CMTM3-214ENST00000567572 RIOX2Q8IUF8 465 aa19.22■□□□□ 0.67
CMTM3-214ENST00000567572 C12orf56Q8IXR9 622 aa19.22■□□□□ 0.67
CMTM3-214ENST00000567572 RDM1Q8NG50 284 aa19.22■□□□□ 0.67
CMTM3-214ENST00000567572 TIPINQ9BVW5 301 aa19.22■□□□□ 0.67
CMTM3-214ENST00000567572 ISCUQ9H1K1 167 aa19.22■□□□□ 0.67
CMTM3-214ENST00000567572 STXBP5LQ9Y2K9 1186 aa19.22■□□□□ 0.67
CMTM3-214ENST00000567572 KIAA1217Q5T5P2 1943 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 EVI5O60447 810 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 SKOR1P84550 965 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 PPIL2Q13356 520 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 UGCGQ16739 394 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 CFAP58Q5T655 872 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 ZNF746Q6NUN9 644 aaPredicted RBP19.21■□□□□ 0.67
CMTM3-214ENST00000567572 PADI6Q6TGC4 694 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 PEX26Q7Z412 305 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 C4orf19Q8IY42 314 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 IQCKQ8N0W5 287 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 DAW1Q8N136 415 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 TSEN2Q8NCE0 465 aaKnown RBP19.21■□□□□ 0.67
CMTM3-214ENST00000567572 RFFLQ8WZ73 363 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 SYT11Q9BT88 431 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 TAF1DQ9H5J8 278 aaPredicted RBP19.21■□□□□ 0.67
CMTM3-214ENST00000567572 SLITRK6Q9H5Y7 841 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 TMEM206Q9H813 350 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 APEX2Q9UBZ4 518 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 MAPK13O15264 365 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 KCNA2P16389 499 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 CARSP49589 748 aaKnown RBP19.21■□□□□ 0.67
CMTM3-214ENST00000567572 RARRES1P49788 294 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 PPP2R5EQ16537 467 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 EMC10Q5UCC4 262 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 SRLQ86TD4 932 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 FBXO40Q9UH90 709 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 AJAP1Q9UKB5 411 aaPredicted RBP19.21■□□□□ 0.67
CMTM3-214ENST00000567572 NFU1Q9UMS0 254 aa19.21■□□□□ 0.67
CMTM3-214ENST00000567572 PFASO15067 1338 aa19.2■□□□□ 0.66
CMTM3-214ENST00000567572 HIP1RO75146 1068 aa19.2■□□□□ 0.66
CMTM3-214ENST00000567572 HSPA9P38646 679 aaKnown RBP19.2■□□□□ 0.66
CMTM3-214ENST00000567572 PSMC5P62195 406 aa19.2■□□□□ 0.66
CMTM3-214ENST00000567572 MYL7Q01449 175 aa19.2■□□□□ 0.66
CMTM3-214ENST00000567572 BFSP1Q12934 665 aa19.2■□□□□ 0.66
CMTM3-214ENST00000567572 INTS8Q75QN2 995 aaKnown RBP19.2■□□□□ 0.66
CMTM3-214ENST00000567572 DNERQ8NFT8 737 aa19.2■□□□□ 0.66
CMTM3-214ENST00000567572 HES6Q96HZ4 224 aa19.2■□□□□ 0.66
CMTM3-214ENST00000567572 CDHR1Q96JP9 859 aa19.2■□□□□ 0.66
CMTM3-214ENST00000567572 IWS1Q96ST2 819 aa19.2■□□□□ 0.66
CMTM3-214ENST00000567572 INTS2Q9H0H0 1204 aaKnown RBP19.2■□□□□ 0.66
CMTM3-214ENST00000567572 LARSQ9P2J5 1176 aaKnown RBP19.2■□□□□ 0.66
CMTM3-214ENST00000567572 TCEAL9Q9UHQ7 104 aa19.2■□□□□ 0.66
CMTM3-214ENST00000567572 DNAJC12Q9UKB3 198 aa19.2■□□□□ 0.66
CMTM3-214ENST00000567572 PACSIN2Q9UNF0 486 aaPredicted RBP19.2■□□□□ 0.66
CMTM3-214ENST00000567572 NFASCO94856 1347 aa19.2■□□□□ 0.66
CMTM3-214ENST00000567572 RAD51CO43502 376 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 PEX10O60683 326 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 YWHABP31946 246 aaKnown RBP19.19■□□□□ 0.66
CMTM3-214ENST00000567572 IRX3P78415 501 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-214ENST00000567572 CETN1Q12798 172 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 MOGSQ13724 837 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 TTLL12Q14166 644 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-214ENST00000567572 ZC2HC1CQ53FD0 456 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-214ENST00000567572 LRIG3Q6UXM1 1119 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 SLC17A8Q8NDX2 589 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 OLIG1Q8TAK6 271 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 CASKIN2Q8WXE0 1202 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 MOV10L1Q9BXT6 1211 aaKnown RBP19.19■□□□□ 0.66
CMTM3-214ENST00000567572 SPATC1LQ9H0A9 340 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 AGTPBP1Q9UPW5 1226 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 IQCA1LA6NCM1 817 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 PMM2O15305 246 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 CEP104O60308 925 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 KRT13P13646 458 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 HADHBP55084 474 aaKnown RBP19.19■□□□□ 0.66
CMTM3-214ENST00000567572 KIF22Q14807 665 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 DRAP1Q14919 205 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-214ENST00000567572 TCEAL1Q15170 157 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 NT5DC3Q86UY8 548 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 U2AF1L4Q8WU68 220 aaKnown RBP19.19■□□□□ 0.66
CMTM3-214ENST00000567572 ZIM3Q96PE6 472 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 CAPS2Q9BXY5 557 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 FAM107BQ9H098 131 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 ASCC2Q9H1I8 757 aaPredicted RBP19.19■□□□□ 0.66
CMTM3-214ENST00000567572 ST6GALNAC4Q9H4F1 302 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 NOC2LQ9Y3T9 749 aaKnown RBP19.19■□□□□ 0.66
CMTM3-214ENST00000567572 MYH11P35749 1972 aa19.19■□□□□ 0.66
CMTM3-214ENST00000567572 SPATA31C2B4DYI2 1134 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms