RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 IFNLR1Q8IU57 520 aaPredicted RBP22.44■■□□□ 1.18
CLN6-207ENST00000566347 FAM184AQ8NB25 1140 aa22.44■■□□□ 1.18
CLN6-207ENST00000566347 CNNM3Q8NE01 707 aa22.44■■□□□ 1.18
CLN6-207ENST00000566347 CCDC51Q96ER9 411 aa22.44■■□□□ 1.18
CLN6-207ENST00000566347 NRDE2Q9H7Z3 1164 aa22.44■■□□□ 1.18
CLN6-207ENST00000566347 RSAD1Q9HA92 442 aa22.44■■□□□ 1.18
CLN6-207ENST00000566347 KANSL3Q9P2N6 904 aa22.44■■□□□ 1.18
CLN6-207ENST00000566347 C2orf71A6NGG8 1288 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 HOXB8P17481 243 aaPredicted RBP22.43■■□□□ 1.18
CLN6-207ENST00000566347 ARL2P36404 184 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 TECP42680 631 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 RBM25P49756 843 aaKnown RBP22.43■■□□□ 1.18
CLN6-207ENST00000566347 UBXN11Q5T124 520 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 ANKRD54Q6NXT1 300 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 NOTUMQ6P988 496 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 AGMOQ6ZNB7 445 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 FBXO18Q8NFZ0 1043 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 PIGOQ8TEQ8 1089 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 CASP10Q92851 521 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 IGSF21Q96ID5 467 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 TUFT1Q9NNX1 390 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 UBN1Q9NPG3 1134 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 STK39Q9UEW8 545 aa22.43■■□□□ 1.18
CLN6-207ENST00000566347 INO80B-WBP1J3KQ70 363 aa22.42■■□□□ 1.18
CLN6-207ENST00000566347 GALTP07902 379 aa22.42■■□□□ 1.18
CLN6-207ENST00000566347 NCLP19338 710 aaKnown RBP22.42■■□□□ 1.18
CLN6-207ENST00000566347 GNL2Q13823 731 aaKnown RBP22.42■■□□□ 1.18
CLN6-207ENST00000566347 CAPSQ13938 189 aa22.42■■□□□ 1.18
CLN6-207ENST00000566347 GIT2Q14161 759 aa22.42■■□□□ 1.18
CLN6-207ENST00000566347 C8orf34Q49A92 452 aa22.42■■□□□ 1.18
CLN6-207ENST00000566347 LLGL2Q6P1M3 1020 aa22.42■■□□□ 1.18
CLN6-207ENST00000566347 DDX53Q86TM3 631 aaKnown RBP22.42■■□□□ 1.18
CLN6-207ENST00000566347 VPS52Q8N1B4 723 aa22.42■■□□□ 1.18
CLN6-207ENST00000566347 ERMNQ8TAM6 284 aa22.42■■□□□ 1.18
CLN6-207ENST00000566347 SUSD6Q92537 303 aa22.42■■□□□ 1.18
CLN6-207ENST00000566347 KIF2CQ99661 725 aa22.42■■□□□ 1.18
CLN6-207ENST00000566347 PHF7Q9BWX1 381 aaPredicted RBP22.42■■□□□ 1.18
CLN6-207ENST00000566347 NFKBIZQ9BYH8 718 aa22.42■■□□□ 1.18
CLN6-207ENST00000566347 ARIH1Q9Y4X5 557 aaPredicted RBP22.42■■□□□ 1.18
CLN6-207ENST00000566347 LOC730098B7Z3J9 87 aa22.41■■□□□ 1.18
CLN6-207ENST00000566347 TSPAN1O60635 241 aa22.41■■□□□ 1.18
CLN6-207ENST00000566347 OR52Z1P0C646 297 aa22.41■■□□□ 1.18
CLN6-207ENST00000566347 SPATA31C1P0DKV0 1188 aa22.41■■□□□ 1.18
CLN6-207ENST00000566347 CA8P35219 290 aa22.41■■□□□ 1.18
CLN6-207ENST00000566347 HERC4Q5GLZ8 1057 aaPredicted RBP22.41■■□□□ 1.18
CLN6-207ENST00000566347 TMEM173Q86WV6 379 aaPredicted RBP22.41■■□□□ 1.18
CLN6-207ENST00000566347 RNF135Q8IUD6 432 aa22.41■■□□□ 1.18
CLN6-207ENST00000566347 ASAP3Q8TDY4 903 aa22.41■■□□□ 1.18
CLN6-207ENST00000566347 FAM193BQ96PV7 902 aaPredicted RBP22.41■■□□□ 1.18
CLN6-207ENST00000566347 POLR3CQ9BUI4 534 aaPredicted RBP22.41■■□□□ 1.18
CLN6-207ENST00000566347 GBP3Q9H0R5 595 aa22.41■■□□□ 1.18
CLN6-207ENST00000566347 ZBP1Q9H171 429 aa22.41■■□□□ 1.18
CLN6-207ENST00000566347 DBR1Q9UK59 544 aaKnown RBP22.41■■□□□ 1.18
CLN6-207ENST00000566347 USO1O60763 962 aaKnown RBP22.4■■□□□ 1.18
CLN6-207ENST00000566347 CXCL14O95715 111 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 ITGA4P13612 1032 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 GLRA2P23416 452 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 TRAPPC10P48553 1259 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 SLC11A1P49279 550 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 MBTD1Q05BQ5 628 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 ZNF174Q15697 407 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 CATSPER3Q86XQ3 398 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 NOSTRINQ8IVI9 506 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 TMEM87AQ8NBN3 555 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 MCPH1Q8NEM0 835 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 NACC1Q96RE7 527 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 TMEM175Q9BSA9 504 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 POLR3FQ9H1D9 316 aaPredicted RBP22.4■■□□□ 1.18
CLN6-207ENST00000566347 S1PR5Q9H228 398 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 DNAJB4Q9UDY4 337 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 NOL7Q9UMY1 257 aaKnown RBP22.4■■□□□ 1.18
CLN6-207ENST00000566347 IRAK3Q9Y616 596 aa22.4■■□□□ 1.18
CLN6-207ENST00000566347 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.39■■□□□ 1.17
CLN6-207ENST00000566347 CTSAP10619 480 aa22.39■■□□□ 1.17
CLN6-207ENST00000566347 CBX2Q14781 532 aaPredicted RBP22.39■■□□□ 1.17
CLN6-207ENST00000566347 TPRNQ4KMQ1 711 aa22.39■■□□□ 1.17
CLN6-207ENST00000566347 TTC38Q5R3I4 469 aa22.39■■□□□ 1.17
CLN6-207ENST00000566347 SYCE2Q6PIF2 218 aa22.39■■□□□ 1.17
CLN6-207ENST00000566347 ZNF280BQ86YH2 543 aa22.39■■□□□ 1.17
CLN6-207ENST00000566347 HACE1Q8IYU2 909 aa22.39■■□□□ 1.17
CLN6-207ENST00000566347 SMG8Q8ND04 991 aaKnown RBP22.39■■□□□ 1.17
CLN6-207ENST00000566347 CSRNP2Q9H175 543 aa22.39■■□□□ 1.17
CLN6-207ENST00000566347 MUTYHQ9UIF7 546 aa22.39■■□□□ 1.17
CLN6-207ENST00000566347 IPPQ9Y573 584 aa22.39■■□□□ 1.17
CLN6-207ENST00000566347 HCFC2Q9Y5Z7 792 aa22.39■■□□□ 1.17
CLN6-207ENST00000566347 CLASP2O75122 1294 aaKnown RBP22.38■■□□□ 1.17
CLN6-207ENST00000566347 MED24O75448 989 aa22.38■■□□□ 1.17
CLN6-207ENST00000566347 ALDH2P05091 517 aa22.38■■□□□ 1.17
CLN6-207ENST00000566347 RPA1P27694 616 aa22.38■■□□□ 1.17
CLN6-207ENST00000566347 AMHR2Q16671 573 aa22.38■■□□□ 1.17
CLN6-207ENST00000566347 CPB2Q96IY4 423 aa22.38■■□□□ 1.17
CLN6-207ENST00000566347 EIF2AQ9BY44 585 aaKnown RBP22.38■■□□□ 1.17
CLN6-207ENST00000566347 TRIM6Q9C030 488 aaPredicted RBP22.38■■□□□ 1.17
CLN6-207ENST00000566347 A0A087WWV3 80 aa22.37■■□□□ 1.17
CLN6-207ENST00000566347 INPPL1O15357 1258 aa22.37■■□□□ 1.17
CLN6-207ENST00000566347 DDHD2O94830 711 aa22.37■■□□□ 1.17
CLN6-207ENST00000566347 ARF4P18085 180 aaPredicted RBP22.37■■□□□ 1.17
CLN6-207ENST00000566347 MUTP22033 750 aa22.37■■□□□ 1.17
CLN6-207ENST00000566347 AFF1P51825 1210 aaKnown RBP22.37■■□□□ 1.17
CLN6-207ENST00000566347 HAUS3Q68CZ6 603 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms