RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 C9orf50Q5SZB4 431 aa9□□□□□ -0.97
CDH13-208ENST00000566333 PSRC1Q6PGN9 363 aaPredicted RBP9□□□□□ -0.97
CDH13-208ENST00000566333 ZNF365Q70YC5 407 aa9□□□□□ -0.97
CDH13-208ENST00000566333 EPM2AIP1Q7L775 607 aaPredicted RBP9□□□□□ -0.97
CDH13-208ENST00000566333 MAP4K3Q8IVH8 894 aa9□□□□□ -0.97
CDH13-208ENST00000566333 ZBTB8OSQ8IWT0 167 aa9□□□□□ -0.97
CDH13-208ENST00000566333 FAM178BQ8IXR5 827 aa9□□□□□ -0.97
CDH13-208ENST00000566333 ELOA2Q8IYF1 753 aaPredicted RBP9□□□□□ -0.97
CDH13-208ENST00000566333 MYCT1Q8N699 235 aa9□□□□□ -0.97
CDH13-208ENST00000566333 KIAA0895Q8NCT3 520 aa9□□□□□ -0.97
CDH13-208ENST00000566333 SEPT8Q92599 483 aa9□□□□□ -0.97
CDH13-208ENST00000566333 APBB2Q92870 758 aa9□□□□□ -0.97
CDH13-208ENST00000566333 LBHD1Q9BQE6 289 aaPredicted RBP9□□□□□ -0.97
CDH13-208ENST00000566333 INO80BQ9C086 356 aaPredicted RBP9□□□□□ -0.97
CDH13-208ENST00000566333 LRRC27Q9C0I9 530 aa9□□□□□ -0.97
CDH13-208ENST00000566333 C2orf40Q9H1Z8 148 aa9□□□□□ -0.97
CDH13-208ENST00000566333 TSPYL2Q9H2G4 693 aaPredicted RBP9□□□□□ -0.97
CDH13-208ENST00000566333 IKZF4Q9H2S9 585 aa9□□□□□ -0.97
CDH13-208ENST00000566333 ZHX3Q9H4I2 956 aa9□□□□□ -0.97
CDH13-208ENST00000566333 KMT5AQ9NQR1 393 aa9□□□□□ -0.97
CDH13-208ENST00000566333 PANK4Q9NVE7 773 aa9□□□□□ -0.97
CDH13-208ENST00000566333 TBC1D7Q9P0N9 293 aa9□□□□□ -0.97
CDH13-208ENST00000566333 CXXC1Q9P0U4 656 aaPredicted RBP9□□□□□ -0.97
CDH13-208ENST00000566333 USP20Q9Y2K6 914 aa9□□□□□ -0.97
CDH13-208ENST00000566333 MYO9BQ13459 2157 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 PVALEFA0A1B0GWK0 134 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 ABLIM1O14639 778 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 GPR182O15218 404 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 BAIAP3O94812 1187 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 RHOBTB3O94955 611 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 PIGRP01833 764 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 RPN1P04843 607 aaKnown RBP8.99□□□□□ -0.97
CDH13-208ENST00000566333 ATF7P17544 494 aaPredicted RBP8.99□□□□□ -0.97
CDH13-208ENST00000566333 ARF4P18085 180 aaPredicted RBP8.99□□□□□ -0.97
CDH13-208ENST00000566333 HOXD13P35453 343 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 EFNA5P52803 228 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 WDR5P61964 334 aaKnown RBP8.99□□□□□ -0.97
CDH13-208ENST00000566333 DEFB103AP81534 67 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 GTF2BQ00403 316 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 KCNA1Q09470 495 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 PCBP1Q15365 356 aaKnown RBP eCLIP8.99□□□□□ -0.97
CDH13-208ENST00000566333 KMT5BQ4FZB7 885 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 ZC2HC1CQ53FD0 456 aaPredicted RBP8.99□□□□□ -0.97
CDH13-208ENST00000566333 FAM26FQ5R3K3 315 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 UBXN11Q5T124 520 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 NT5DC1Q5TFE4 455 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 SLC39A4Q6P5W5 647 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 CATSPER4Q7RTX7 472 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 HAUS6Q7Z4H7 955 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 RTN4RL1Q86UN2 441 aaPredicted RBP8.99□□□□□ -0.97
CDH13-208ENST00000566333 CCDC65Q8IXS2 484 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 CRIPAKQ8N1N5 446 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 HERVK_113Q902F9 699 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 CPB2Q96IY4 423 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 PRIMPOLQ96LW4 560 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 CLSTN2Q9H4D0 955 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 PDZD7Q9H5P4 517 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 TMEM134Q9H6X4 195 aa8.99□□□□□ -0.97
CDH13-208ENST00000566333 PRMT7Q9NVM4 692 aaPredicted RBP8.99□□□□□ -0.97
CDH13-208ENST00000566333 PIN4Q9Y237 131 aaKnown RBP8.99□□□□□ -0.97
CDH13-208ENST00000566333 REV3LO60673 3130 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 PLXNA4Q9HCM2 1894 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 ABHD14A-ACY1A0A1B0GW23 586 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 TISP43B9A030 160 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 C9IYK1 514 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 H0YCG3 227 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 ACKR2O00590 384 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 EIF3DO15371 548 aaKnown RBP eCLIP8.98□□□□□ -0.97
CDH13-208ENST00000566333 ERLIN2O94905 339 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 PROZP22891 400 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 BMP8BP34820 402 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 SARSP49591 514 aaKnown RBP8.98□□□□□ -0.97
CDH13-208ENST00000566333 SMTNP53814 917 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 NFX1Q12986 1120 aaKnown RBP8.98□□□□□ -0.97
CDH13-208ENST00000566333 STK4Q13043 487 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 KCNB1Q14721 858 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 SHHQ15465 462 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 MAPK6Q16659 721 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 BMT2Q1RMZ1 405 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 HERC4Q5GLZ8 1057 aaPredicted RBP8.98□□□□□ -0.97
CDH13-208ENST00000566333 L1TD1Q5T7N2 865 aaKnown RBP8.98□□□□□ -0.97
CDH13-208ENST00000566333 PRPF38BQ5VTL8 546 aaKnown RBP8.98□□□□□ -0.97
CDH13-208ENST00000566333 EEF1DP3Q658K8 133 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 KANK3Q6NY19 840 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 CHRDL2Q6WN34 429 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.98□□□□□ -0.97
CDH13-208ENST00000566333 OTOP2Q7RTS6 562 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 ZNF720Q7Z2F6 126 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 RPUSD2Q8IZ73 545 aaKnown RBP8.98□□□□□ -0.97
CDH13-208ENST00000566333 SCFD1Q8WVM8 642 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 HVCN1Q96D96 273 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 TRAIPQ9BWF2 469 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 FTHL17Q9BXU8 183 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 UBE2OQ9C0C9 1292 aaKnown RBP8.98□□□□□ -0.97
CDH13-208ENST00000566333 HAPLN2Q9GZV7 340 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 MRPL44Q9H9J2 332 aaKnown RBP8.98□□□□□ -0.97
CDH13-208ENST00000566333 RC3H2Q9HBD1 1191 aaKnown RBP8.98□□□□□ -0.97
CDH13-208ENST00000566333 PTPRHQ9HD43 1115 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 EXOC1Q9NV70 894 aa8.98□□□□□ -0.97
CDH13-208ENST00000566333 TBX20Q9UMR3 447 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms