RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 ADAM15Q13444 863 aa28.05■■■□□ 2.08
AC009041.3-201ENST00000564390 PADI6Q6TGC4 694 aa28.05■■■□□ 2.08
AC009041.3-201ENST00000564390 EFHBQ8N7U6 833 aa28.05■■■□□ 2.08
AC009041.3-201ENST00000564390 SNX29Q8TEQ0 813 aa28.05■■■□□ 2.08
AC009041.3-201ENST00000564390 TLE6Q9H808 572 aa28.05■■■□□ 2.08
AC009041.3-201ENST00000564390 B4GALT3O60512 393 aa28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 GLP2RO95838 553 aa28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 AFF1P51825 1210 aaKnown RBP28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 RNASELQ05823 741 aaKnown RBP28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 POU5F1BQ06416 359 aa28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 IL17AQ16552 155 aa28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 NOTUMQ6P988 496 aa28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 MRPL10Q7Z7H8 261 aaKnown RBP28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 TMEM173Q86WV6 379 aaPredicted RBP28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 IGSF22Q8N9C0 903 aa28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 SMG8Q8ND04 991 aaKnown RBP28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 BSNDQ8WZ55 320 aa28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 NRDE2Q9H7Z3 1164 aa28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 RSAD1Q9HA92 442 aa28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 CD320Q9NPF0 282 aa28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 DNAJB4Q9UDY4 337 aa28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 PUF60Q9UHX1 559 aaKnown RBP28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 KIAA1024Q9UPX6 916 aa28.04■■■□□ 2.08
AC009041.3-201ENST00000564390 ARF4P18085 180 aaPredicted RBP28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 ALDH7A1P49419 539 aaKnown RBP28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 KRT17Q04695 432 aa28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 PUS10Q3MIT2 529 aaKnown RBP28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 CDR2LQ86X02 465 aaPredicted RBP28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 FAM178BQ8IXR5 827 aa28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 NFKBIZQ9BYH8 718 aa28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 BHMT2Q9H2M3 363 aa28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 DDX19AQ9NUU7 478 aaKnown RBP28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 BARX2Q9UMQ3 279 aaPredicted RBP28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 HES2Q9Y543 173 aa28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 IPPQ9Y573 584 aa28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 BDP1A6H8Y1 2624 aa28.03■■■□□ 2.08
AC009041.3-201ENST00000564390 HIDE1A8MVS5 230 aa28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 NCLP19338 710 aaKnown RBP28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 CDC25AP30304 524 aa28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 AXLP30530 894 aa28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 PCBP1Q15365 356 aaKnown RBP eCLIP28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 RILPL1Q5EBL4 403 aa28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 ZNF280BQ86YH2 543 aa28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 URGCPQ8TCY9 931 aa28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 BCL7CQ8WUZ0 217 aaPredicted RBP28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 APOL6Q9BWW8 343 aa28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 RAB34Q9BZG1 259 aa28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 CSRNP2Q9H175 543 aa28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 POLD4Q9HCU8 107 aa28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 CLEC1BQ9P126 229 aa28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 CD207Q9UJ71 328 aa28.02■■■□□ 2.08
AC009041.3-201ENST00000564390 CNTNAP2Q9UHC6 1331 aa28.01■■■□□ 2.07
AC009041.3-201ENST00000564390 LAD1O00515 517 aa28.01■■■□□ 2.07
AC009041.3-201ENST00000564390 CYP11B2P19099 503 aa28.01■■■□□ 2.07
AC009041.3-201ENST00000564390 MUTP22033 750 aa28.01■■■□□ 2.07
AC009041.3-201ENST00000564390 NCBP1Q09161 790 aaKnown RBP28.01■■■□□ 2.07
AC009041.3-201ENST00000564390 PDIA5Q14554 519 aa28.01■■■□□ 2.07
AC009041.3-201ENST00000564390 DUSP6Q16828 381 aa28.01■■■□□ 2.07
AC009041.3-201ENST00000564390 PDE12Q6L8Q7 609 aaKnown RBP28.01■■■□□ 2.07
AC009041.3-201ENST00000564390 TMC7Q7Z402 723 aa28.01■■■□□ 2.07
AC009041.3-201ENST00000564390 VN1R2Q8NFZ6 395 aa28.01■■■□□ 2.07
AC009041.3-201ENST00000564390 RSPH1Q8WYR4 309 aa28.01■■■□□ 2.07
AC009041.3-201ENST00000564390 CCDC51Q96ER9 411 aa28.01■■■□□ 2.07
AC009041.3-201ENST00000564390 RNF39Q9H2S5 420 aa28.01■■■□□ 2.07
AC009041.3-201ENST00000564390 MBTPS2O43462 519 aa28■■■□□ 2.07
AC009041.3-201ENST00000564390 POMCP01189 267 aa28■■■□□ 2.07
AC009041.3-201ENST00000564390 ITGA4P13612 1032 aa28■■■□□ 2.07
AC009041.3-201ENST00000564390 PRPHP41219 470 aa28■■■□□ 2.07
AC009041.3-201ENST00000564390 SLC11A1P49279 550 aa28■■■□□ 2.07
AC009041.3-201ENST00000564390 CDCA2Q69YH5 1023 aaPredicted RBP28■■■□□ 2.07
AC009041.3-201ENST00000564390 DTHD1Q6ZMT9 781 aa28■■■□□ 2.07
AC009041.3-201ENST00000564390 KHSRPQ92945 711 aaKnown RBP eCLIP28■■■□□ 2.07
AC009041.3-201ENST00000564390 TMEM169Q96HH4 297 aa28■■■□□ 2.07
AC009041.3-201ENST00000564390 MSLNLQ96KJ4 702 aa28■■■□□ 2.07
AC009041.3-201ENST00000564390 NXF3Q9H4D5 531 aaKnown RBP28■■■□□ 2.07
AC009041.3-201ENST00000564390 DDHD2O94830 711 aa27.99■■■□□ 2.07
AC009041.3-201ENST00000564390 GALTP07902 379 aa27.99■■■□□ 2.07
AC009041.3-201ENST00000564390 CA8P35219 290 aa27.99■■■□□ 2.07
AC009041.3-201ENST00000564390 ATP2C1P98194 919 aaPredicted RBP27.99■■■□□ 2.07
AC009041.3-201ENST00000564390 LARP1BQ659C4 914 aaKnown RBP27.99■■■□□ 2.07
AC009041.3-201ENST00000564390 ZBTB8OSQ8IWT0 167 aa27.99■■■□□ 2.07
AC009041.3-201ENST00000564390 BACH2Q9BYV9 841 aa27.99■■■□□ 2.07
AC009041.3-201ENST00000564390 TRIM6Q9C030 488 aaPredicted RBP27.99■■■□□ 2.07
AC009041.3-201ENST00000564390 FAM50BQ9Y247 325 aa27.99■■■□□ 2.07
AC009041.3-201ENST00000564390 E9PMD0 336 aa27.98■■■□□ 2.07
AC009041.3-201ENST00000564390 NPTXRO95502 500 aa27.98■■■□□ 2.07
AC009041.3-201ENST00000564390 LIG1P18858 919 aa27.98■■■□□ 2.07
AC009041.3-201ENST00000564390 SSTR3P32745 418 aaPredicted RBP27.98■■■□□ 2.07
AC009041.3-201ENST00000564390 MLH1P40692 756 aa27.98■■■□□ 2.07
AC009041.3-201ENST00000564390 SMAD4Q13485 552 aaKnown RBP27.98■■■□□ 2.07
AC009041.3-201ENST00000564390 KRT79Q5XKE5 535 aa27.98■■■□□ 2.07
AC009041.3-201ENST00000564390 CNNM3Q8NE01 707 aa27.98■■■□□ 2.07
AC009041.3-201ENST00000564390 IGSF21Q96ID5 467 aa27.98■■■□□ 2.07
AC009041.3-201ENST00000564390 MMTAG2Q9BU76 263 aaKnown RBP27.98■■■□□ 2.07
AC009041.3-201ENST00000564390 KIFC3Q9BVG8 833 aa27.98■■■□□ 2.07
AC009041.3-201ENST00000564390 NGRNQ9NPE2 291 aaKnown RBP27.98■■■□□ 2.07
AC009041.3-201ENST00000564390 TTLL13PA6NNM8 815 aa27.97■■■□□ 2.07
AC009041.3-201ENST00000564390 SMC1AQ14683 1233 aaKnown RBP27.97■■■□□ 2.07
AC009041.3-201ENST00000564390 ZRSR1Q15695 479 aaKnown RBP27.97■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms