RNA–Protein interactions for RNA: ENST00000564272.1

SHCBP1-203, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 530 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-203ENST00000564272 LRRIQ4A6NIV6 560 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 PP2D1A8MPX8 630 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 PER2O15055 1255 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 B4GALT5O43286 388 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 B4GALT3O60512 393 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 GLP2RO95838 553 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 AXLP30530 894 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 NDUFV1P49821 464 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 PCBP1Q15365 356 aaKnown RBP eCLIP22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 PUS10Q3MIT2 529 aaKnown RBP22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 NOTUMQ6P988 496 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 IGSF22Q8N9C0 903 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 SMG8Q8ND04 991 aaKnown RBP22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 RSPH1Q8WYR4 309 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 BSNDQ8WZ55 320 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 TCF25Q9BQ70 676 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 NFKBIZQ9BYH8 718 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 GBP3Q9H0R5 595 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 TLE6Q9H808 572 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 RSAD1Q9HA92 442 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 ENTPD7Q9NQZ7 604 aa22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 PUF60Q9UHX1 559 aaKnown RBP22.15■■□□□ 1.14
SHCBP1-203ENST00000564272 ARF4P18085 180 aaPredicted RBP22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 NCLP19338 710 aaKnown RBP22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 MUTP22033 750 aa22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 ALDH7A1P49419 539 aaKnown RBP22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 AFF1P51825 1210 aaKnown RBP22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 RBM10P98175 930 aaKnown RBP22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 KRT17Q04695 432 aa22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 RNASELQ05823 741 aaKnown RBP22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 RILPL1Q5EBL4 403 aa22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 TMEM173Q86WV6 379 aaPredicted RBP22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 CCDC51Q96ER9 411 aa22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 NRDE2Q9H7Z3 1164 aa22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 CD320Q9NPF0 282 aa22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 DDX19AQ9NUU7 478 aaKnown RBP22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 KIAA1024Q9UPX6 916 aa22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 IPPQ9Y573 584 aa22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.14■■□□□ 1.13
SHCBP1-203ENST00000564272 CNTNAP2Q9UHC6 1331 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 HIDE1A8MVS5 230 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 LAD1O00515 517 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 CYP11B2P19099 503 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 PRPHP41219 470 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 PDIA5Q14554 519 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 DUSP6Q16828 381 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 CDCA2Q69YH5 1023 aaPredicted RBP22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 PDE12Q6L8Q7 609 aaKnown RBP22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 CDR2LQ86X02 465 aaPredicted RBP22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 FAM178BQ8IXR5 827 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 URGCPQ8TCY9 931 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 RAB34Q9BZG1 259 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 CSRNP2Q9H175 543 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 BHMT2Q9H2M3 363 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 CLEC1BQ9P126 229 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 DNAJB4Q9UDY4 337 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 CD207Q9UJ71 328 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 BARX2Q9UMQ3 279 aaPredicted RBP22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 HES2Q9Y543 173 aa22.13■■□□□ 1.13
SHCBP1-203ENST00000564272 ITGA4P13612 1032 aa22.12■■□□□ 1.13
SHCBP1-203ENST00000564272 CDC25AP30304 524 aa22.12■■□□□ 1.13
SHCBP1-203ENST00000564272 ATP2C1P98194 919 aaPredicted RBP22.12■■□□□ 1.13
SHCBP1-203ENST00000564272 NCBP1Q09161 790 aaKnown RBP22.12■■□□□ 1.13
SHCBP1-203ENST00000564272 DTHD1Q6ZMT9 781 aa22.12■■□□□ 1.13
SHCBP1-203ENST00000564272 ZNF280BQ86YH2 543 aa22.12■■□□□ 1.13
SHCBP1-203ENST00000564272 VN1R2Q8NFZ6 395 aa22.12■■□□□ 1.13
SHCBP1-203ENST00000564272 BCL7CQ8WUZ0 217 aaPredicted RBP22.12■■□□□ 1.13
SHCBP1-203ENST00000564272 BACH2Q9BYV9 841 aa22.12■■□□□ 1.13
SHCBP1-203ENST00000564272 RNF39Q9H2S5 420 aa22.12■■□□□ 1.13
SHCBP1-203ENST00000564272 POLD4Q9HCU8 107 aa22.12■■□□□ 1.13
SHCBP1-203ENST00000564272 MBTPS2O43462 519 aa22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 GALTP07902 379 aa22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 SLC11A1P49279 550 aa22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 KRT79Q5XKE5 535 aa22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 LARP1BQ659C4 914 aaKnown RBP22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 TMC7Q7Z402 723 aa22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 ZBTB8OSQ8IWT0 167 aa22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 CNNM3Q8NE01 707 aa22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 TMEM169Q96HH4 297 aa22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 MSLNLQ96KJ4 702 aa22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 MMTAG2Q9BU76 263 aaKnown RBP22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 APOL6Q9BWW8 343 aa22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 NXF3Q9H4D5 531 aaKnown RBP22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 FAM50BQ9Y247 325 aa22.11■■□□□ 1.13
SHCBP1-203ENST00000564272 E9PMD0 336 aa22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 DDHD2O94830 711 aa22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 NPTXRO95502 500 aa22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 POMCP01189 267 aa22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 MLH1P40692 756 aa22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 SMAD4Q13485 552 aaKnown RBP22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 CUL4AQ13619 759 aa22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 PPP4R3CPQ6ZMV5 832 aa22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 KHSRPQ92945 711 aaKnown RBP eCLIP22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 IGSF21Q96ID5 467 aa22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 CDCA3Q99618 268 aaPredicted RBP22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 KIFC3Q9BVG8 833 aa22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 TRIM6Q9C030 488 aaPredicted RBP22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 NGRNQ9NPE2 291 aaKnown RBP22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 PRMT7Q9NVM4 692 aaPredicted RBP22.1■■□□□ 1.13
SHCBP1-203ENST00000564272 STK24Q9Y6E0 443 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms