RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 KLRC3Q07444 240 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 EMC10Q5UCC4 262 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 TRPM8Q7Z2W7 1104 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 SLFN11Q7Z7L1 901 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 CCT6BQ92526 530 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 ARHGEF2Q92974 986 aaKnown RBP12.72□□□□□ -0.37
ABCA3-203ENST00000563623 TEKT1Q969V4 418 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 ZNF653Q96CK0 615 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 KLHL29Q96CT2 875 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 INTUQ9ULD6 942 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 ATF5Q9Y2D1 282 aaPredicted RBP12.72□□□□□ -0.37
ABCA3-203ENST00000563623 DLEC1Q9Y238 1755 aa12.72□□□□□ -0.37
ABCA3-203ENST00000563623 PHF2O75151 1096 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 SNHG28P0DPA3 235 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 DHX34Q14147 1143 aaKnown RBP12.71□□□□□ -0.37
ABCA3-203ENST00000563623 CDC42EP5Q6NZY7 148 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 CPNE8Q86YQ8 564 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 STAMBPL1Q96FJ0 436 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 MTFR1LQ9H019 292 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 COG5Q9UP83 839 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 PASKQ96RG2 1323 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.71□□□□□ -0.37
ABCA3-203ENST00000563623 TISP43B9A030 160 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 UBOX5O94941 541 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 GSCP56915 257 aaPredicted RBP12.71□□□□□ -0.37
ABCA3-203ENST00000563623 ELF3P78545 371 aaPredicted RBP12.71□□□□□ -0.37
ABCA3-203ENST00000563623 CAPN12Q6ZSI9 719 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 C3orf20Q8ND61 904 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 DDX23Q9BUQ8 820 aaKnown RBP12.71□□□□□ -0.37
ABCA3-203ENST00000563623 PARP2Q9UGN5 583 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 TCEAL9Q9UHQ7 104 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 TRPC6Q9Y210 931 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 SYNGAP1Q96PV0 1343 aa12.71□□□□□ -0.37
ABCA3-203ENST00000563623 TCRBV7S2A1N4TA0A589 114 aa12.71□□□□□ -0.38
ABCA3-203ENST00000563623 CHRNA3P32297 505 aa12.71□□□□□ -0.38
ABCA3-203ENST00000563623 STX2P32856 288 aa12.71□□□□□ -0.38
ABCA3-203ENST00000563623 NPEPPSP55786 919 aa12.71□□□□□ -0.38
ABCA3-203ENST00000563623 JAM2P57087 298 aa12.71□□□□□ -0.38
ABCA3-203ENST00000563623 GPC5P78333 572 aa12.71□□□□□ -0.38
ABCA3-203ENST00000563623 AP3B2Q13367 1082 aa12.71□□□□□ -0.38
ABCA3-203ENST00000563623 TNIP1Q15025 636 aa12.71□□□□□ -0.38
ABCA3-203ENST00000563623 RHOT2Q8IXI1 618 aa12.71□□□□□ -0.38
ABCA3-203ENST00000563623 ETNPPLQ8TBG4 499 aa12.71□□□□□ -0.38
ABCA3-203ENST00000563623 FAM20AQ96MK3 541 aa12.71□□□□□ -0.38
ABCA3-203ENST00000563623 FAM118BQ9BPY3 351 aa12.71□□□□□ -0.38
ABCA3-203ENST00000563623 A0A1W2PRG0 241 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 ATP6V1G2O95670 118 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 KRT5P13647 590 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 ACCSLQ4AC99 568 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 FAM47EQ6ZV65 393 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 PRELID2Q8N945 189 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 KAT5Q92993 513 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 P2RX7Q99572 595 aaKnown RBP12.7□□□□□ -0.38
ABCA3-203ENST00000563623 KDM4CQ9H3R0 1056 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 ECT2Q9H8V3 914 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 KIAA1551Q9HCM1 1747 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 SRRM3A6NNA2 597 aaPredicted RBP12.7□□□□□ -0.38
ABCA3-203ENST00000563623 CLDN3O15551 220 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 ECEL1O95672 775 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 GABPAQ06546 454 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 SGO2Q562F6 1265 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 SYDE2Q5VT97 1194 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 PHLDB3Q6NSJ2 640 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 FMNL3Q8IVF7 1028 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 SLC30A5Q8TAD4 765 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 TLCD1Q96CP7 247 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 DBNDD1Q9H9R9 158 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 AGPAT3Q9NRZ7 376 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 DIS3Q9Y2L1 958 aaKnown RBP12.7□□□□□ -0.38
ABCA3-203ENST00000563623 PCDHAC2Q9Y5I4 1007 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 SPATA31A5Q5VU36 1347 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 SPATA31A7Q8IWB4 1347 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 MYO3BQ8WXR4 1341 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 THAP12O43422 761 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 SUN1O94901 812 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 AGTP01019 485 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 FOSP01100 380 aaPredicted RBP12.7□□□□□ -0.38
ABCA3-203ENST00000563623 PYGMP11217 842 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 IL1R1P14778 569 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 CDC25CP30307 473 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 SEPT14Q6ZU15 432 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 CCDC17Q96LX7 622 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 LAMB1P07942 1786 aa12.7□□□□□ -0.38
ABCA3-203ENST00000563623 TMEM120BA0PK00 339 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 ANKRD63C9JTQ0 380 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 PODXLO00592 558 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 CYP26A1O43174 497 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 SKAP2O75563 359 aaPredicted RBP12.69□□□□□ -0.38
ABCA3-203ENST00000563623 ANXA13P27216 316 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 ADCY8P40145 1251 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 PDE6CP51160 858 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 SLMAPQ14BN4 828 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 RNF207Q6ZRF8 634 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 EPM2AIP1Q7L775 607 aaPredicted RBP12.69□□□□□ -0.38
ABCA3-203ENST00000563623 KCNV2Q8TDN2 545 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 NUP85Q9BW27 656 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 ADAM33Q9BZ11 813 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 MCM8Q9UJA3 840 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 SGPL1O95470 568 aa12.69□□□□□ -0.38
ABCA3-203ENST00000563623 CREB1P16220 341 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 287.6 ms