RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 MAKP20794 623 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 MANFP55145 182 aaKnown RBP4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 PPARAQ07869 468 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 CRB2Q5IJ48 1285 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 ZNF662Q6ZS27 426 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 HTR3DQ70Z44 454 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 C11orf74Q86VG3 221 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 LEO1Q8WVC0 666 aaPredicted RBP4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 ST8SIA2Q92186 375 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 CHFRQ96EP1 664 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 ANO3Q9BYT9 981 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 EMC7Q9NPA0 242 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 GPRC5BQ9NZH0 403 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 TMPRSS11EQ9UL52 423 aa4.81□□□□□ -1.64
HMGB1P33-201ENST00000563485 ENPP3O14638 875 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 NRP1O14786 923 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 KDM1AO60341 852 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 PDE8AO60658 829 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 PEX11BO96011 259 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 GNAT2P19087 354 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 HK1P19367 917 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 CASRP41180 1078 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 MGAT5Q09328 741 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 BROXQ5VW32 411 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 FRMD7Q6ZUT3 714 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 ZNF627Q7L945 461 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 APBB1IPQ7Z5R6 666 aaPredicted RBP4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 LYSMD2Q8IV50 215 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 MSL3Q8N5Y2 521 aaKnown RBP4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 SLC5A5Q92911 643 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 IKZF4Q9H2S9 585 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 PRDM12Q9H4Q4 367 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 TRPS1Q9UHF7 1281 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 NUMBLQ9Y6R0 609 aa4.8□□□□□ -1.64
HMGB1P33-201ENST00000563485 A0A1W2PR48 441 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 GRXCR1A8MXD5 290 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 GOLGA6L6A8MZA4 724 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 HOXA3O43365 443 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 NRP2O60462 931 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 MYCLP1P12525 358 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 XPAP23025 273 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 GPR15P49685 360 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 DPTQ07507 201 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 TRIM25Q14258 630 aaKnown RBP4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 DDB1Q16531 1140 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 RABL3Q5HYI8 236 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 CCDC62Q6P9F0 684 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 TAS1R1Q7RTX1 841 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 LDLRAD3Q86YD5 345 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 OR5M3Q8NGP4 307 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 EPC1Q9H2F5 836 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 NRDE2Q9H7Z3 1164 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 EVLQ9UI08 416 aaPredicted RBP4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 PRSS50Q9UI38 385 aa4.79□□□□□ -1.64
HMGB1P33-201ENST00000563485 WDR33Q9C0J8 1336 aaKnown RBP4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 RAB11FIP3O75154 756 aa4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 BPIP17213 487 aa4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 NRG3P56975 720 aa4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 ATP13A4Q4VNC1 1196 aa4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 CCDC178Q5BJE1 867 aa4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 DCAF17Q5H9S7 520 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 NAIF1Q69YI7 327 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 LMBR1LQ6UX01 489 aa4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 SLC41A1Q8IVJ1 513 aa4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 SLC25A43Q8WUT9 341 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 CPPED1Q9BRF8 314 aaPredicted RBP4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 CPEB1Q9BZB8 566 aaKnown RBP4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 TBX22Q9Y458 520 aa4.78□□□□□ -1.64
HMGB1P33-201ENST00000563485 A0A087X1B8 175 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 OVOL3O00110 214 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 LPLP06858 475 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 KRT4P19013 534 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 NR4A1P22736 598 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 ID4P47928 161 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 PTTG1IPP53801 180 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 INHBCP55103 352 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 DUSP2Q05923 314 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 MRPL49Q13405 166 aaKnown RBP4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 UBE3CQ15386 1083 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 PLEKHG4Q58EX7 1191 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 CT83Q5H943 113 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 PITRM1Q5JRX3 1037 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 Q6ZPA2 131 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 RASSF3Q86WH2 238 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 GLB1L2Q8IW92 636 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 ZNF276Q8N554 614 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 USP7Q93009 1102 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 IL17RAQ96F46 866 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 CEP89Q96ST8 783 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 LSM14BQ9BX40 385 aaKnown RBP4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 WNT8AQ9H1J5 351 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 SORCS3Q9UPU3 1222 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 MAPRE3Q9UPY8 281 aa4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 NOC2LQ9Y3T9 749 aaKnown RBP4.77□□□□□ -1.65
HMGB1P33-201ENST00000563485 DNAJC6O75061 913 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 TMEM127O75204 238 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 LTA4HP09960 611 aaKnown RBP4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 PTGS2P35354 604 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 GZMKP49863 264 aa4.76□□□□□ -1.65
HMGB1P33-201ENST00000563485 GYS2P54840 703 aa4.76□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms