RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 GLYCTKQ8IVS8 523 aa23.13■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 PROCA1Q8NCQ7 364 aaPredicted RBP23.13■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 VIPAS39Q9H9C1 493 aa23.13■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ATG7O95352 703 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ADRB2P07550 413 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 GARTP22102 1010 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ADSSP30520 456 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ALDH5A1P51649 535 aaPredicted RBP23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 GALCP54803 685 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 CCNI2Q6ZMN8 369 aaPredicted RBP23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 CALR3Q96L12 384 aaKnown RBP23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 FBXL18Q96ME1 805 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 KIFC3Q9BVG8 833 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 TMEM117Q9H0C3 514 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ZNF302Q9NR11 478 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 A0A0G2JMZ2 1700 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 GOLGA8IPA6NC78 632 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 GOLGA8JA6NMD2 632 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 FOXN3O00409 490 aaPredicted RBP23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 DDNO94850 711 aaPredicted RBP23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 KIF4AO95239 1232 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 OAS2P29728 719 aaKnown RBP23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 KRT39Q6A163 491 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SLFN11Q7Z7L1 901 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 CBWD2Q8IUF1 395 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 OLIG1Q8TAK6 271 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 PLEKHO2Q8TD55 490 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 CTNNBL1Q8WYA6 563 aaPredicted RBP23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 MFSD14AQ96MC6 490 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 AGPAT1Q99943 283 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SELENOOQ9BVL4 669 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 POLR3FQ9H1D9 316 aaPredicted RBP23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 XPNPEP1Q9NQW7 623 aa23.12■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 PPATQ06203 517 aa23.11■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 DMTNQ08495 405 aa23.11■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 TERF2Q15554 542 aa23.11■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 PARD3BQ8TEW8 1205 aa23.11■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 RFFLQ8WZ73 363 aa23.11■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 POMGNT1Q8WZA1 660 aa23.11■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 KCNN1Q92952 543 aa23.11■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 LRRC1Q9BTT6 524 aa23.11■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 TMEM8AQ9HCN3 771 aa23.11■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 MAFBQ9Y5Q3 323 aaPredicted RBP23.11■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 WDR81Q562E7 1941 aa23.11■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 OATP04181 439 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 MATR3P43243 847 aaKnown RBP eCLIP23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 POLGP54098 1239 aaPredicted RBP23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 IRX3P78415 501 aaPredicted RBP23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 EMC2Q15006 297 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 MTERF2Q49AM1 385 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 C8orf74Q6P047 294 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 GADL1Q6ZQY3 521 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 CYFIP1Q7L576 1253 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ARHGEF19Q8IW93 802 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 MS4A14Q96JA4 679 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SPATC1LQ9H0A9 340 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 KIAA1586Q9HCI6 787 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ST7Q9NRC1 585 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 BTBD7Q9P203 1132 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ARHGAP28Q9P2N2 729 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SUCLA2Q9P2R7 463 aaPredicted RBP23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 COQ4Q9Y3A0 265 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 PAPPA2Q9BXP8 1791 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 LCTP09848 1927 aa23.1■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 A0A0G2JLL6 359 aaPredicted RBP23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 A0A0U1RQG5 324 aaPredicted RBP23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 HNRNPDLO14979 420 aaKnown RBP23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 KIAA0391O15091 583 aaKnown RBP23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 LRRN2O75325 713 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 MFAP3P55082 362 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SP2Q02086 613 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 CNTN2Q02246 1040 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 PEX26Q7Z412 305 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 PRRT2Q7Z6L0 340 aaPredicted RBP23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 GPD1LQ8N335 351 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ZSWIM2Q8NEG5 633 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SAAL1Q96ER3 474 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 BICD1Q96G01 975 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 MPHOSPH6Q99547 160 aaKnown RBP23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 RBM12Q9NTZ6 932 aaKnown RBP23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SYNGAP1Q96PV0 1343 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ADM5C9JUS6 153 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 CXCL11O14625 94 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 KCNK3O14649 394 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 COPB2P35606 906 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 TNNT3P45378 269 aaPredicted RBP23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SOX10P56693 466 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 CYP24A1Q07973 514 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SLC39A4Q6P5W5 647 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SEPT14Q6ZU15 432 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ERO1BQ86YB8 467 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 UBE2Q2Q8WVN8 375 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SUGCTQ9HAC7 445 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SEPT11Q9NVA2 429 aaKnown RBP23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SMARCAL1Q9NZC9 954 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 EHD2Q9NZN4 543 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 STIM2Q9P246 746 aa23.09■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 SBF1O95248 1867 aa23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 PTPRFP10586 1907 aa23.08■■□□□ 1.29
VPS9D1-AS1-202ENST00000562866 ANKRD62A6NC57 917 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms