RNA–Protein interactions for RNA: ENST00000562806.1

CHD9-207, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 400 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-207ENST00000562806 PTPN18Q99952 460 aa4.01□□□□□ -1.77
CHD9-207ENST00000562806 PDCD2LQ9BRP1 358 aa4.01□□□□□ -1.77
CHD9-207ENST00000562806 KLC2Q9H0B6 622 aa4.01□□□□□ -1.77
CHD9-207ENST00000562806 PCDH12Q9NPG4 1184 aa4.01□□□□□ -1.77
CHD9-207ENST00000562806 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.01□□□□□ -1.77
CHD9-207ENST00000562806 C14orf119Q9NWQ9 140 aa4.01□□□□□ -1.77
CHD9-207ENST00000562806 TSC22D4Q9Y3Q8 395 aa4.01□□□□□ -1.77
CHD9-207ENST00000562806 MRFAP1Q9Y605 127 aa4.01□□□□□ -1.77
CHD9-207ENST00000562806 RPTORQ8N122 1335 aa4□□□□□ -1.77
CHD9-207ENST00000562806 KRTAP4-8A0A0G2JLE6 195 aa4□□□□□ -1.77
CHD9-207ENST00000562806 UBE2QL1A1L167 161 aa4□□□□□ -1.77
CHD9-207ENST00000562806 LPLP06858 475 aa4□□□□□ -1.77
CHD9-207ENST00000562806 CLEC2LP0C7M8 214 aa4□□□□□ -1.77
CHD9-207ENST00000562806 MSX2P35548 267 aaPredicted RBP4□□□□□ -1.77
CHD9-207ENST00000562806 GUCY2FP51841 1108 aa4□□□□□ -1.77
CHD9-207ENST00000562806 SCAND1P57086 179 aa4□□□□□ -1.77
CHD9-207ENST00000562806 ERVK-21P61565 698 aa4□□□□□ -1.77
CHD9-207ENST00000562806 AMPD3Q01432 767 aa4□□□□□ -1.77
CHD9-207ENST00000562806 DUSP2Q05923 314 aa4□□□□□ -1.77
CHD9-207ENST00000562806 MUM1Q2TAK8 710 aa4□□□□□ -1.77
CHD9-207ENST00000562806 MUM1L1Q5H9M0 696 aa4□□□□□ -1.77
CHD9-207ENST00000562806 MAMDC4Q6UXC1 1216 aa4□□□□□ -1.77
CHD9-207ENST00000562806 ZNF662Q6ZS27 426 aa4□□□□□ -1.77
CHD9-207ENST00000562806 GAREM2Q75VX8 874 aa4□□□□□ -1.77
CHD9-207ENST00000562806 APBB1IPQ7Z5R6 666 aaPredicted RBP4□□□□□ -1.77
CHD9-207ENST00000562806 LYSMD2Q8IV50 215 aa4□□□□□ -1.77
CHD9-207ENST00000562806 GSPT2Q8IYD1 628 aaKnown RBP4□□□□□ -1.77
CHD9-207ENST00000562806 GPR135Q8IZ08 494 aa4□□□□□ -1.77
CHD9-207ENST00000562806 FAM177A1Q8N128 213 aaPredicted RBP4□□□□□ -1.77
CHD9-207ENST00000562806 D2HGDHQ8N465 521 aa4□□□□□ -1.77
CHD9-207ENST00000562806 CNTD1Q8N815 330 aa4□□□□□ -1.77
CHD9-207ENST00000562806 ABCF1Q8NE71 845 aaKnown RBP eCLIP4□□□□□ -1.77
CHD9-207ENST00000562806 SNX33Q8WV41 574 aa4□□□□□ -1.77
CHD9-207ENST00000562806 MIEF2Q96C03 454 aa4□□□□□ -1.77
CHD9-207ENST00000562806 MS4A5Q9H3V2 200 aa4□□□□□ -1.77
CHD9-207ENST00000562806 IFT122Q9HBG6 1241 aa4□□□□□ -1.77
CHD9-207ENST00000562806 DNAJC28Q9NX36 388 aa4□□□□□ -1.77
CHD9-207ENST00000562806 EVLQ9UI08 416 aaPredicted RBP4□□□□□ -1.77
CHD9-207ENST00000562806 JAG2Q9Y219 1238 aa4□□□□□ -1.77
CHD9-207ENST00000562806 MYRFQ9Y2G1 1151 aa4□□□□□ -1.77
CHD9-207ENST00000562806 LCHNA4D1U4 455 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 ZNF20P17024 532 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 GNAT2P19087 354 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 ACO1P21399 889 aaKnown RBP3.99□□□□□ -1.77
CHD9-207ENST00000562806 CRHR1P34998 444 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 GPR3P46089 330 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 ANAPC15P60006 121 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 ADAM8P78325 824 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 TRIM25Q14258 630 aaKnown RBP3.99□□□□□ -1.77
CHD9-207ENST00000562806 FKBP15Q5T1M5 1219 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 SYDE2Q5VT97 1194 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 KCNK18Q7Z418 384 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 SGMS1Q86VZ5 419 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 PRPF38AQ8NAV1 312 aaKnown RBP3.99□□□□□ -1.77
CHD9-207ENST00000562806 PIK3C3Q8NEB9 887 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 GPR156Q8NFN8 814 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 OR5M3Q8NGP4 307 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 GPHA2Q96T91 129 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 FDXACB1Q9BRP7 624 aaPredicted RBP3.99□□□□□ -1.77
CHD9-207ENST00000562806 ACE2Q9BYF1 805 aaPredicted RBP3.99□□□□□ -1.77
CHD9-207ENST00000562806 GREM2Q9H772 168 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 TYW1Q9NV66 732 aaKnown RBP3.99□□□□□ -1.77
CHD9-207ENST00000562806 HECAQ9UBI9 543 aaPredicted RBP3.99□□□□□ -1.77
CHD9-207ENST00000562806 DPP7Q9UHL4 492 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 SAP30BPQ9UHR5 308 aaKnown RBP3.99□□□□□ -1.77
CHD9-207ENST00000562806 ST6GALNAC2Q9UJ37 374 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 GIT1Q9Y2X7 761 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 GPR45Q9Y5Y3 372 aa3.99□□□□□ -1.77
CHD9-207ENST00000562806 hCG_2014768A0A024R1R8 64 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 SHTN1A0MZ66 631 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 FAM171A2A8MVW0 826 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 GOLGA6L6A8MZA4 724 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 PRAMEF4O60810 478 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 ENDOD1O94919 500 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 CTSSP25774 331 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 HIBADHP31937 336 aaKnown RBP3.98□□□□□ -1.77
CHD9-207ENST00000562806 MTNR1BP49286 362 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 GZMKP49863 264 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 FOXL1Q12952 345 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 UBE3CQ15386 1083 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 DCAF17Q5H9S7 520 aaPredicted RBP3.98□□□□□ -1.77
CHD9-207ENST00000562806 LCE1DQ5T752 114 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 MBNL2Q5VZF2 373 aaKnown RBP3.98□□□□□ -1.77
CHD9-207ENST00000562806 LHFPL2Q6ZUX7 228 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 FAM83AQ86UY5 434 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 GLB1L3Q8NCI6 653 aaPredicted RBP3.98□□□□□ -1.77
CHD9-207ENST00000562806 ZNF480Q8WV37 535 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 IL17RAQ96F46 866 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 ADOQ96SZ5 270 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 CDC5LQ99459 802 aaKnown RBP3.98□□□□□ -1.77
CHD9-207ENST00000562806 ADI1Q9BV57 179 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 QRSL1Q9H0R6 528 aaKnown RBP3.98□□□□□ -1.77
CHD9-207ENST00000562806 HOMER2Q9NSB8 354 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 RBM12Q9NTZ6 932 aaKnown RBP3.98□□□□□ -1.77
CHD9-207ENST00000562806 CCM2LQ9NUG4 571 aaPredicted RBP3.98□□□□□ -1.77
CHD9-207ENST00000562806 MKS1Q9NXB0 559 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 NCDNQ9UBB6 729 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 EDARQ9UNE0 448 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 HDAC5Q9UQL6 1122 aa3.98□□□□□ -1.77
CHD9-207ENST00000562806 KRTAP23-1A1A580 65 aa3.97□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms