RNA–Protein interactions for RNA: ENST00000562626.1

CLK3-208, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-208ENST00000562626 RNPC3Q96LT9 517 aaKnown RBP10.8□□□□□ -0.68
CLK3-208ENST00000562626 ADAM2Q99965 735 aa10.8□□□□□ -0.68
CLK3-208ENST00000562626 NTPCRQ9BSD7 190 aaKnown RBP10.8□□□□□ -0.68
CLK3-208ENST00000562626 TIPINQ9BVW5 301 aa10.8□□□□□ -0.68
CLK3-208ENST00000562626 STRA6Q9BX79 667 aa10.8□□□□□ -0.68
CLK3-208ENST00000562626 EIF2AQ9BY44 585 aaKnown RBP10.8□□□□□ -0.68
CLK3-208ENST00000562626 TSPYL2Q9H2G4 693 aaPredicted RBP10.8□□□□□ -0.68
CLK3-208ENST00000562626 FZD8Q9H461 694 aa10.8□□□□□ -0.68
CLK3-208ENST00000562626 PARVGQ9HBI0 331 aa10.8□□□□□ -0.68
CLK3-208ENST00000562626 KMT5AQ9NQR1 393 aa10.8□□□□□ -0.68
CLK3-208ENST00000562626 RNF19AQ9NV58 838 aa10.8□□□□□ -0.68
CLK3-208ENST00000562626 VWA8A3KMH1 1905 aa10.8□□□□□ -0.68
CLK3-208ENST00000562626 ABHD14A-ACY1A0A1B0GW23 586 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 DENND3A2RUS2 1198 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 TISP43B9A030 160 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 C9IYK1 514 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 ABLIM1O14639 778 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 GPR182O15218 404 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 TRAK2O60296 914 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 TBCAO75347 108 aaKnown RBP10.79□□□□□ -0.68
CLK3-208ENST00000562626 PRKCBP05771 671 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 MYBP10242 640 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 MYOGP15173 224 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 COL9A1P20849 921 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 HOXD13P35453 343 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 PBX2P40425 430 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 UBE2HP62256 183 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 ASIC1P78348 528 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 CDC42EP1Q00587 391 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 DPYDQ12882 1025 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 DMP1Q13316 513 aaPredicted RBP10.79□□□□□ -0.68
CLK3-208ENST00000562626 IKBKEQ14164 716 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 PPP2R5AQ15172 486 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 FAM117BQ6P1L5 589 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 SLC39A4Q6P5W5 647 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 PPP4R3CPQ6ZMV5 832 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 HAUS6Q7Z4H7 955 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 CEP57L1Q8IYX8 460 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 CNNM3Q8NE01 707 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 GPT2Q8TD30 523 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 APBB2Q92870 758 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 ZBTB45Q96K62 511 aaPredicted RBP10.79□□□□□ -0.68
CLK3-208ENST00000562626 IFT74Q96LB3 600 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 HAPLN2Q9GZV7 340 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 CXCL16Q9H2A7 254 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 PDZD7Q9H5P4 517 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 MAGEF1Q9HAY2 307 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 RGS18Q9NS28 235 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 PANK4Q9NVE7 773 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 PIN4Q9Y237 131 aaKnown RBP10.79□□□□□ -0.68
CLK3-208ENST00000562626 PHLPP2Q6ZVD8 1323 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 CNTNAP2Q9UHC6 1331 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 SCN1AP35498 2009 aa10.79□□□□□ -0.68
CLK3-208ENST00000562626 ZMYM2Q9UBW7 1377 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 CHD7Q9P2D1 2997 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 LCHNA4D1U4 455 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 GOLGA6L4A6NEF3 574 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 K7ENM7 598 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 GTPBP6O43824 516 aaPredicted RBP10.78□□□□□ -0.68
CLK3-208ENST00000562626 BAIAP3O94812 1187 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 UPP2O95045 317 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 ACTN1P12814 892 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 SFPQP23246 707 aaKnown RBP eCLIP10.78□□□□□ -0.68
CLK3-208ENST00000562626 FAM187BQ17R55 369 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 KMT5BQ4FZB7 885 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 UNC13DQ70J99 1090 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 ZNF598Q86UK7 904 aaKnown RBP10.78□□□□□ -0.68
CLK3-208ENST00000562626 ZBTB8OSQ8IWT0 167 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 FAM178BQ8IXR5 827 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 MYOCDQ8IZQ8 938 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 ZNF710Q8N1W2 664 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 SMG8Q8ND04 991 aaKnown RBP10.78□□□□□ -0.68
CLK3-208ENST00000562626 LPPQ93052 612 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 TARS2Q9BW92 718 aaKnown RBP10.78□□□□□ -0.68
CLK3-208ENST00000562626 RNF39Q9H2S5 420 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 RC3H2Q9HBD1 1191 aaKnown RBP10.78□□□□□ -0.68
CLK3-208ENST00000562626 PRMT7Q9NVM4 692 aaPredicted RBP10.78□□□□□ -0.68
CLK3-208ENST00000562626 DACT1Q9NYF0 836 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 HCSTQ9UBK5 93 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 USP25Q9UHP3 1055 aa10.78□□□□□ -0.68
CLK3-208ENST00000562626 YBX2Q9Y2T7 364 aaKnown RBP10.78□□□□□ -0.68
CLK3-208ENST00000562626 A0A1B0GUA9 196 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 ANKRD63C9JTQ0 380 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 K7ERI5 159 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 ACKR2O00590 384 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 MEFVO15553 781 aaPredicted RBP10.77□□□□□ -0.69
CLK3-208ENST00000562626 ERLIN2O94905 339 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 PRPF6O94906 941 aaKnown RBP10.77□□□□□ -0.69
CLK3-208ENST00000562626 NPTXRO95502 500 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 AFF1P51825 1210 aaKnown RBP10.77□□□□□ -0.69
CLK3-208ENST00000562626 FAM189BP81408 668 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 GTF2BQ00403 316 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 PRPF4BQ13523 1007 aaKnown RBP10.77□□□□□ -0.69
CLK3-208ENST00000562626 MAPK6Q16659 721 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 CSPP1Q1MSJ5 1256 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 HERC4Q5GLZ8 1057 aaPredicted RBP10.77□□□□□ -0.69
CLK3-208ENST00000562626 TWF2Q6IBS0 349 aaKnown RBP10.77□□□□□ -0.69
CLK3-208ENST00000562626 EPM2AIP1Q7L775 607 aaPredicted RBP10.77□□□□□ -0.69
CLK3-208ENST00000562626 ZNF720Q7Z2F6 126 aa10.77□□□□□ -0.69
CLK3-208ENST00000562626 HERC6Q8IVU3 1022 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms