RNA–Protein interactions for RNA: ENST00000562404.1

LPCAT4-202, Transcript of lysophosphatidylcholine acyltransferase 4, humanhuman

TSL 3

Gene LPCAT4, Length 577 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4-202ENST00000562404 SNX29Q8TEQ0 813 aa12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 KHSRPQ92945 711 aaKnown RBP eCLIP12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 CCDC43Q96MW1 224 aaKnown RBP12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 BHMT2Q9H2M3 363 aa12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 NRDE2Q9H7Z3 1164 aa12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 AAASQ9NRG9 546 aa12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 DDX19AQ9NUU7 478 aaKnown RBP12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 TBC1D13Q9NVG8 400 aa12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 MIOSQ9NXC5 875 aa12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 DNAJB4Q9UDY4 337 aa12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 INPP5FQ9Y2H2 1132 aa12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 KIF3AQ9Y496 699 aa12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 MYH15Q9Y2K3 1946 aa12.31□□□□□ -0.44
LPCAT4-202ENST00000562404 LRRIQ4A6NIV6 560 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 HIDE1A8MVS5 230 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 TNFRSF10AO00220 468 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 PER2O15055 1255 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 CYP11B2P19099 503 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 PRPHP41219 470 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 NRIP1P48552 1158 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 RAB27AP51159 221 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 PLCB3Q01970 1234 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 UBE3AQ05086 875 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 GRIN1Q05586 938 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 ADAM15Q13444 863 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 TFDP1Q14186 410 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 RILPL1Q5EBL4 403 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 NOMO2Q5JPE7 1267 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 HAUS3Q68CZ6 603 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 CDCA2Q69YH5 1023 aaPredicted RBP12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 LRRC15Q8TF66 581 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 MRPS27Q92552 414 aaKnown RBP12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 ZNF558Q96NG5 402 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 PNMA5Q96PV4 448 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 KIFC3Q9BVG8 833 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 NFKBIZQ9BYH8 718 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 TLR9Q9NR96 1032 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 IPPQ9Y573 584 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 GTF3C3Q9Y5Q9 886 aa12.3□□□□□ -0.44
LPCAT4-202ENST00000562404 ARHGEF35A5YM69 484 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 GRXCR2A6NFK2 248 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 LAD1O00515 517 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 ZC3H11AO75152 810 aaKnown RBP eCLIP12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 ERLIN2O94905 339 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 GALTP07902 379 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 SKIP12755 728 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 NCLP19338 710 aaKnown RBP12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 MUTP22033 750 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 PLPP4Q5VZY2 271 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 PTCRAQ6ISU1 281 aaPredicted RBP12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 DTHD1Q6ZMT9 781 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 DAW1Q8N136 415 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 MCPH1Q8NEM0 835 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 RUSC1Q9BVN2 902 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 VN1R3Q9BXE9 311 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 CCDC113Q9H0I3 377 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 GBP3Q9H0R5 595 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 CSRNP2Q9H175 543 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 CXCL16Q9H2A7 254 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 FZD8Q9H461 694 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 NXF3Q9H4D5 531 aaKnown RBP12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 RSAD1Q9HA92 442 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 FOXD4L1Q9NU39 408 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 SPG21Q9NZD8 308 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 CLEC1BQ9P126 229 aa12.29□□□□□ -0.44
LPCAT4-202ENST00000562404 A0A1B0GUA9 196 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 VWA3AA6NCI4 1184 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 EYA4O95677 639 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 POMCP01189 267 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 AXLP30530 894 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 SLC11A1P49279 550 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 KCNC3Q14003 757 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 DUSP6Q16828 381 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 CSPP1Q1MSJ5 1256 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 FAM173BQ6P4H8 233 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 NOTUMQ6P988 496 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 GLB1LQ6UWU2 654 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 FAM178BQ8IXR5 827 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 EFHBQ8N7U6 833 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 GSTCDQ8NEC7 633 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 MICAL1Q8TDZ2 1067 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 AUTS2Q8WXX7 1259 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 PGBD4Q96DM1 585 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 MSLNLQ96KJ4 702 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 ZFP42Q96MM3 310 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 GAD1Q99259 594 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 PLIN2Q99541 437 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 TCF25Q9BQ70 676 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 APOL6Q9BWW8 343 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 MRPL9Q9BYD2 267 aaKnown RBP12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 BARX2Q9UMQ3 279 aaPredicted RBP12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 LZTS1Q9Y250 596 aa12.28□□□□□ -0.44
LPCAT4-202ENST00000562404 PLXNA3P51805 1871 aa12.27□□□□□ -0.44
LPCAT4-202ENST00000562404 VPS37CA5D8V6 355 aaPredicted RBP12.27□□□□□ -0.45
LPCAT4-202ENST00000562404 F8W810 466 aa12.27□□□□□ -0.45
LPCAT4-202ENST00000562404 MBTPS2O43462 519 aa12.27□□□□□ -0.45
LPCAT4-202ENST00000562404 NPTXRO95502 500 aa12.27□□□□□ -0.45
LPCAT4-202ENST00000562404 ITGA4P13612 1032 aa12.27□□□□□ -0.45
LPCAT4-202ENST00000562404 AKAP5P24588 427 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms