RNA–Protein interactions for RNA: ENST00000562219.1

BBS4-205, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-205ENST00000562219 LETM2Q2VYF4 491 aa11.5□□□□□ -0.57
BBS4-205ENST00000562219 AGMOQ6ZNB7 445 aa11.5□□□□□ -0.57
BBS4-205ENST00000562219 C15orf39Q6ZRI6 1047 aa11.5□□□□□ -0.57
BBS4-205ENST00000562219 BLIDQ8IZY5 108 aa11.5□□□□□ -0.57
BBS4-205ENST00000562219 DAGLBQ8NCG7 672 aa11.5□□□□□ -0.57
BBS4-205ENST00000562219 FEZF2Q8TBJ5 459 aa11.5□□□□□ -0.57
BBS4-205ENST00000562219 SLC7A3Q8WY07 619 aa11.5□□□□□ -0.57
BBS4-205ENST00000562219 KLHL5Q96PQ7 755 aa11.5□□□□□ -0.57
BBS4-205ENST00000562219 FAM193BQ96PV7 902 aaPredicted RBP11.5□□□□□ -0.57
BBS4-205ENST00000562219 TMEM175Q9BSA9 504 aa11.5□□□□□ -0.57
BBS4-205ENST00000562219 RSAD1Q9HA92 442 aa11.5□□□□□ -0.57
BBS4-205ENST00000562219 MRPL17Q9NRX2 175 aaKnown RBP11.5□□□□□ -0.57
BBS4-205ENST00000562219 KANSL3Q9P2N6 904 aa11.5□□□□□ -0.57
BBS4-205ENST00000562219 DDX25Q9UHL0 483 aaKnown RBP11.5□□□□□ -0.57
BBS4-205ENST00000562219 DUSP12Q9UNI6 340 aa11.5□□□□□ -0.57
BBS4-205ENST00000562219 DOCK6Q96HP0 2047 aa11.5□□□□□ -0.57
BBS4-205ENST00000562219 DDHD2O94830 711 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 DEXIO95424 95 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 SSBP05455 408 aaKnown RBP eCLIP11.49□□□□□ -0.57
BBS4-205ENST00000562219 URODP06132 367 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 AOC1P19801 751 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 KLRC2P26717 231 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 PSMA5P28066 241 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 QARSP47897 775 aaKnown RBP11.49□□□□□ -0.57
BBS4-205ENST00000562219 FOXK2Q01167 660 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 SSRP1Q08945 709 aaKnown RBP11.49□□□□□ -0.57
BBS4-205ENST00000562219 PPP2R5CQ13362 524 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 NPY5RQ15761 445 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 GALNT17Q6IS24 598 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 FRMD5Q7Z6J6 570 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 MRPL10Q7Z7H8 261 aaKnown RBP11.49□□□□□ -0.57
BBS4-205ENST00000562219 EXOC8Q8IYI6 725 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 FAM177A1Q8N128 213 aaPredicted RBP11.49□□□□□ -0.57
BBS4-205ENST00000562219 FLCNQ8NFG4 579 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 PSPC1Q8WXF1 523 aaKnown RBP11.49□□□□□ -0.57
BBS4-205ENST00000562219 NKD2Q969F2 451 aaPredicted RBP11.49□□□□□ -0.57
BBS4-205ENST00000562219 KCNK12Q9HB15 430 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 VAV3Q9UKW4 847 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 PPME1Q9Y570 386 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 GVINP1Q7Z2Y8 2422 aa11.49□□□□□ -0.57
BBS4-205ENST00000562219 WDR87Q6ZQQ6 2873 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 EML1O00423 815 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 CPLX1O14810 134 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 SLC37A4O43826 429 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 DKC1O60832 514 aaKnown RBP eCLIP11.48□□□□□ -0.57
BBS4-205ENST00000562219 LILRB3O75022 631 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 SOD2P04179 222 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 ALDH2P05091 517 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 ADH1AP07327 375 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 RFC5P40937 340 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 AFF1P51825 1210 aaKnown RBP11.48□□□□□ -0.57
BBS4-205ENST00000562219 NONOQ15233 471 aaKnown RBP eCLIP11.48□□□□□ -0.57
BBS4-205ENST00000562219 ELMSAN1Q6PJG2 1045 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 KRT25Q7Z3Z0 450 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 SRGAP1Q7Z6B7 1085 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 CCDC105Q8IYK2 499 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 CMASQ8NFW8 434 aaPredicted RBP11.48□□□□□ -0.57
BBS4-205ENST00000562219 PRPF31Q8WWY3 499 aaKnown RBP11.48□□□□□ -0.57
BBS4-205ENST00000562219 TMEM143Q96AN5 459 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 CEP170P1Q96L14 293 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 DHX33Q9H6R0 707 aaKnown RBP11.48□□□□□ -0.57
BBS4-205ENST00000562219 MINDY3Q9H8M7 445 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 MAN1C1Q9NR34 630 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 IGSF9Q9P2J2 1179 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 DPP7Q9UHL4 492 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 FBXL21Q9UKT6 434 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 SSX2IPQ9Y2D8 614 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 FAN1Q9Y2M0 1017 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 ZNF292O60281 2723 aa11.48□□□□□ -0.57
BBS4-205ENST00000562219 C2CD2LO14523 706 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 NRP1O14786 923 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 GAS2O43903 313 aaKnown RBP11.47□□□□□ -0.57
BBS4-205ENST00000562219 ERLIN2O94905 339 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 REC8O95072 547 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 POMCP01189 267 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 SRGAP2CP0DJJ0 459 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 NPR3P17342 541 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 NCLP19338 710 aaKnown RBP11.47□□□□□ -0.57
BBS4-205ENST00000562219 HOXA11P31270 313 aaPredicted RBP11.47□□□□□ -0.57
BBS4-205ENST00000562219 GLUD2P49448 558 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 NPEPPSP55786 919 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 LAMTOR4Q0VGL1 99 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 TOB2Q14106 344 aaPredicted RBP11.47□□□□□ -0.57
BBS4-205ENST00000562219 EMC2Q15006 297 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 INF2Q27J81 1249 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 UBXN11Q5T124 520 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 CYP26C1Q6V0L0 522 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 RUFY3Q7L099 469 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 SIX5Q8N196 739 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 ZNF579Q8NAF0 562 aaKnown RBP11.47□□□□□ -0.57
BBS4-205ENST00000562219 CNNM3Q8NE01 707 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 TCP11Q8WWU5 503 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 STAMQ92783 540 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 FAM20AQ96MK3 541 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 RPS6KC1Q96S38 1066 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 RTP3Q9BQQ7 232 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 HERC2P3Q9BVR0 1158 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 RHOBTB2Q9BYZ6 727 aa11.47□□□□□ -0.57
BBS4-205ENST00000562219 SLKQ9H2G2 1235 aaPredicted RBP11.47□□□□□ -0.57
BBS4-205ENST00000562219 KCNMB3Q9NPA1 279 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms