RNA–Protein interactions for RNA: ENST00000561391.1

SPG11-225, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 629 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-225ENST00000561391 BVESQ8NE79 360 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 ENOX1Q8TC92 643 aaKnown RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 SYTL5Q8TDW5 730 aaPredicted RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 LPAR1Q92633 364 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 MKL1Q969V6 931 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 HDAC8Q9BY41 377 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 FOXP3Q9BZS1 431 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 SLC6A17Q9H1V8 727 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 CGGBP1Q9UFW8 167 aaPredicted RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 TCFL5Q9UL49 500 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 DIS3Q9Y2L1 958 aaKnown RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 GPR55Q9Y2T6 319 aaPredicted RBP4.03□□□□□ -1.76
SPG11-225ENST00000561391 PCDHA11Q9Y5I1 949 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 FHOD1Q9Y613 1164 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 ZHX2Q9Y6X8 837 aa4.03□□□□□ -1.76
SPG11-225ENST00000561391 PRRC2BQ5JSZ5 2229 aaKnown RBP4.02□□□□□ -1.77
SPG11-225ENST00000561391 MAST2Q6P0Q8 1798 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 A0A1W2PQU0 124 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 TMEM221A6NGB7 291 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 EPOPA6NHQ4 379 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 PROB1E7EW31 1015 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 M0R296 226 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 CXCL11O14625 94 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 KIAA0355O15063 1070 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 TBX1O43435 398 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 DIAPH1O60610 1272 aaKnown RBP4.02□□□□□ -1.77
SPG11-225ENST00000561391 PEX10O60683 326 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 PQBP1O60828 265 aaKnown RBP4.02□□□□□ -1.77
SPG11-225ENST00000561391 CD3EP07766 207 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 CELA3BP08861 270 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 GSTM1P09488 218 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 POU3F3P20264 500 aaPredicted RBP4.02□□□□□ -1.77
SPG11-225ENST00000561391 KCNA5P22460 613 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 RPL10P27635 214 aaKnown RBP4.02□□□□□ -1.77
SPG11-225ENST00000561391 CTSKP43235 329 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 ZNF143P52747 638 aaPredicted RBP4.02□□□□□ -1.77
SPG11-225ENST00000561391 POU4F1Q01851 419 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 TAF7Q15545 349 aaPredicted RBP4.02□□□□□ -1.77
SPG11-225ENST00000561391 POMZP3Q6PJE2 187 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 TMPRSS7Q7RTY8 843 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 GGNQ86UU5 652 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 TMEM151BQ8IW70 566 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 ARHGEF39Q8N4T4 335 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 ARRDC4Q8NCT1 418 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 ST13P5Q8NFI4 369 aaPredicted RBP4.02□□□□□ -1.77
SPG11-225ENST00000561391 CXorf38Q8TB03 319 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 ARNTL2Q8WYA1 636 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 RTF1Q92541 710 aaKnown RBP4.02□□□□□ -1.77
SPG11-225ENST00000561391 RCC1LQ96I51 464 aaKnown RBP4.02□□□□□ -1.77
SPG11-225ENST00000561391 PHACTR3Q96KR7 559 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 FSD1Q9BTV5 496 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 CDADC1Q9BWV3 514 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 ZNF341Q9BYN7 854 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 RNF32Q9H0A6 362 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 EPN3Q9H201 632 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 TMPRSS5Q9H3S3 457 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 CD209Q9NNX6 404 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 DDX20Q9UHI6 824 aaKnown RBP4.02□□□□□ -1.77
SPG11-225ENST00000561391 MUTYHQ9UIF7 546 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 ZMYM5Q9UJ78 669 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 SIPA1L3O60292 1781 aaPredicted RBP4.02□□□□□ -1.77
SPG11-225ENST00000561391 RPAP1Q9BWH6 1393 aaPredicted RBP4.02□□□□□ -1.77
SPG11-225ENST00000561391 MED23Q9ULK4 1368 aa4.02□□□□□ -1.77
SPG11-225ENST00000561391 AK9Q5TCS8 1911 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 GAKO14976 1311 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 KBTBD13C9JR72 458 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 STXBP3O00186 592 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 TRIM13O60858 407 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 TIMP1P01033 207 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 HPXP02790 462 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 ESR1P03372 595 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 GSNP06396 782 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 ADRB1P08588 477 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 VAV1P15498 845 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 CSF2RAP15509 400 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 TRHRP34981 398 aaPredicted RBP4.01□□□□□ -1.77
SPG11-225ENST00000561391 NOP2P46087 812 aaKnown RBP4.01□□□□□ -1.77
SPG11-225ENST00000561391 KCNJ6P48051 423 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 VCPP55072 806 aaKnown RBP4.01□□□□□ -1.77
SPG11-225ENST00000561391 AMPD2Q01433 879 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 PPIGQ13427 754 aaKnown RBP eCLIP4.01□□□□□ -1.77
SPG11-225ENST00000561391 HSP90AA2PQ14568 343 aaPredicted RBP4.01□□□□□ -1.77
SPG11-225ENST00000561391 PUM1Q14671 1186 aaKnown RBP eCLIP4.01□□□□□ -1.77
SPG11-225ENST00000561391 RALBP1Q15311 655 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 FAM110CQ1W6H9 321 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 SKOR2Q2VWA4 1001 aaPredicted RBP4.01□□□□□ -1.77
SPG11-225ENST00000561391 LEXMQ3ZCV2 418 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 GIMAP6Q6P9H5 292 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 CCDC174Q6PII3 467 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 LRP10Q7Z4F1 713 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 BMP8AQ7Z5Y6 402 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 ZNF227Q86WZ6 799 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 IRF2BP1Q8IU81 584 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 CCAR1Q8IX12 1150 aaKnown RBP4.01□□□□□ -1.77
SPG11-225ENST00000561391 KIAA2013Q8IYS2 634 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 LRRC47Q8N1G4 583 aaKnown RBP4.01□□□□□ -1.77
SPG11-225ENST00000561391 LILRB2Q8N423 598 aa4.01□□□□□ -1.77
SPG11-225ENST00000561391 CRACR2BQ8N4Y2 399 aaPredicted RBP4.01□□□□□ -1.77
SPG11-225ENST00000561391 ZNF513Q8N8E2 541 aaPredicted RBP4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms