RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 CNKSR3Q6P9H4 555 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 ZNF365Q70YC5 407 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 PHF12Q96QT6 1004 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 CCDC113Q9H0I3 377 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 ERVK-5Q9HDB9 667 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 SLC39A2Q9NP94 309 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 OLFML3Q9NRN5 406 aa11.32□□□□□ -0.6
LRRC28-221ENST00000561276 PRMT7Q9NVM4 692 aaPredicted RBP11.32□□□□□ -0.6
LRRC28-221ENST00000561276 MICAL3Q7RTP6 2002 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 TTLL13PA6NNM8 815 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 K7ENM7 598 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 ACKR2O00590 384 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 ENPP3O14638 875 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 MBD3O95983 291 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 ACTN1P12814 892 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 ZSCAN20P17040 1043 aaPredicted RBP11.31□□□□□ -0.6
LRRC28-221ENST00000561276 SCP2P22307 547 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 SARSP49591 514 aaKnown RBP11.31□□□□□ -0.6
LRRC28-221ENST00000561276 STRN3Q13033 797 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 FAM187BQ17R55 369 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 FAM26FQ5R3K3 315 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 TMEM240Q5SV17 173 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 OTOP2Q7RTS6 562 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 TAS1R3Q7RTX0 852 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 RTN4RL1Q86UN2 441 aaPredicted RBP11.31□□□□□ -0.6
LRRC28-221ENST00000561276 SLC17A8Q8NDX2 589 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 SPATA20Q8TB22 786 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 APBB2Q92870 758 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 SMARCE1Q969G3 411 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 CCDC47Q96A33 483 aaKnown RBP11.31□□□□□ -0.6
LRRC28-221ENST00000561276 CPB2Q96IY4 423 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 GSDMAQ96QA5 445 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 ADAM2Q99965 735 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 GDF15Q99988 308 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.31□□□□□ -0.6
LRRC28-221ENST00000561276 STRA6Q9BX79 667 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 FGFBP2Q9BYJ0 223 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 TMX1Q9H3N1 280 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 ST6GALNAC4Q9H4F1 302 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 EXOC1Q9NV70 894 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 TBX20Q9UMR3 447 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 USP20Q9Y2K6 914 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 PCDHB13Q9Y5F0 798 aa11.31□□□□□ -0.6
LRRC28-221ENST00000561276 A0A1B0GUA9 196 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 ABHD14A-ACY1A0A1B0GW23 586 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 B4GALT5O43286 388 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 MGEA5O60502 916 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 TSPAN1O60635 241 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 RHOBTB3O94955 611 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 SMC2O95347 1197 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 GCNT3O95395 438 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 EDN1P05305 212 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 PRKCBP05771 671 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 MYBP10242 640 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 ARF4P18085 180 aaPredicted RBP11.3□□□□□ -0.6
LRRC28-221ENST00000561276 AXLP30530 894 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 HOXA11P31270 313 aaPredicted RBP11.3□□□□□ -0.6
LRRC28-221ENST00000561276 ABCD1P33897 745 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 CASP5P51878 434 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 STK4Q13043 487 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 PRPF4BQ13523 1007 aaKnown RBP11.3□□□□□ -0.6
LRRC28-221ENST00000561276 KCNB1Q14721 858 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 AMHR2Q16671 573 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 NT5DC1Q5TFE4 455 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 ISM2Q6H9L7 571 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 GLIS3Q8NEA6 775 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 PRIMPOLQ96LW4 560 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 FTHL17Q9BXU8 183 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 UBE2OQ9C0C9 1292 aaKnown RBP11.3□□□□□ -0.6
LRRC28-221ENST00000561276 NUP62CLQ9H1M0 184 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 CLSTN2Q9H4D0 955 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 CHST12Q9NRB3 414 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 AGPAT5Q9NUQ2 364 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 PIN4Q9Y237 131 aaKnown RBP11.3□□□□□ -0.6
LRRC28-221ENST00000561276 PTPRSQ13332 1948 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 PHLPP2Q6ZVD8 1323 aa11.3□□□□□ -0.6
LRRC28-221ENST00000561276 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.29□□□□□ -0.6
LRRC28-221ENST00000561276 PPP1R37O75864 691 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 PRPF6O94906 941 aaKnown RBP11.29□□□□□ -0.6
LRRC28-221ENST00000561276 PTMSP20962 102 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 BMP8BP34820 402 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 KCNA1Q09470 495 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 DSC3Q14574 896 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 SHHQ15465 462 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 NFKBIBQ15653 356 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 TMEM132AQ24JP5 1023 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 NOTUMQ6P988 496 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 PSRC1Q6PGN9 363 aaPredicted RBP11.29□□□□□ -0.6
LRRC28-221ENST00000561276 FAM43BQ6ZT52 329 aaPredicted RBP11.29□□□□□ -0.6
LRRC28-221ENST00000561276 STXBP4Q6ZWJ1 553 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 EPM2AIP1Q7L775 607 aaPredicted RBP11.29□□□□□ -0.6
LRRC28-221ENST00000561276 CDR2LQ86X02 465 aaPredicted RBP11.29□□□□□ -0.6
LRRC28-221ENST00000561276 ZNF507Q8TCN5 953 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 KCNN1Q92952 543 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 ACO2Q99798 780 aaKnown RBP11.29□□□□□ -0.6
LRRC28-221ENST00000561276 TARS2Q9BW92 718 aaKnown RBP11.29□□□□□ -0.6
LRRC28-221ENST00000561276 RGS18Q9NS28 235 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 RMND1Q9NWS8 449 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 KIAA1468Q9P260 1216 aa11.29□□□□□ -0.6
LRRC28-221ENST00000561276 ZBBXA8MT70 800 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms