RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 PTCH2Q9Y6C5 1203 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 PHLDB1Q86UU1 1377 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 TNIKQ9UKE5 1360 aa5.11□□□□□ -1.59
LRRC28-218ENST00000560236 E9PSI1 815 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 PLD2O14939 933 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 MAFGO15525 162 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 RAPGEF3O95398 923 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 ABHD16AO95870 558 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 PROZP22891 400 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 PTX3P26022 381 aaPredicted RBP5.1□□□□□ -1.59
LRRC28-218ENST00000560236 RANGAP1P46060 587 aaPredicted RBP5.1□□□□□ -1.59
LRRC28-218ENST00000560236 HSPA2P54652 639 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 RBL2Q08999 1139 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 PTPAQ15257 358 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 C2orf27AQ580R0 203 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 LY6G5CQ5SRR4 150 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 NAIF1Q69YI7 327 aaPredicted RBP5.1□□□□□ -1.59
LRRC28-218ENST00000560236 CD109Q6YHK3 1445 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 PROKR1Q8TCW9 393 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 UACAQ9BZF9 1416 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 FZD1Q9UP38 647 aa5.1□□□□□ -1.59
LRRC28-218ENST00000560236 FER1L4A9Z1Z3 1794 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 WDR7Q9Y4E6 1490 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 YEATS2Q9ULM3 1422 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 GRXCR1A8MXD5 290 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 PPFIA4O75335 1185 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 APOL3O95236 402 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 NUDT3O95989 172 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 ITGB1P05556 798 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 HK1P19367 917 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 ADRA1BP35368 520 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 ADCY2Q08462 1091 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 DCAF17Q5H9S7 520 aaPredicted RBP5.09□□□□□ -1.59
LRRC28-218ENST00000560236 TIGD7Q6NT04 549 aaPredicted RBP5.09□□□□□ -1.59
LRRC28-218ENST00000560236 APBB1IPQ7Z5R6 666 aaPredicted RBP5.09□□□□□ -1.59
LRRC28-218ENST00000560236 CPT1CQ8TCG5 803 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 MKL1Q969V6 931 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 MTG2Q9H4K7 406 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 PACSIN3Q9UKS6 424 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 SORCS3Q9UPU3 1222 aa5.09□□□□□ -1.59
LRRC28-218ENST00000560236 TNPO3Q9Y5L0 923 aaKnown RBP5.09□□□□□ -1.59
LRRC28-218ENST00000560236 A0A0A6YYJ9 748 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 MTSS1O43312 755 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 OPA1O60313 960 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 STC2O76061 302 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 RECQL4O94761 1208 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 LMNAP02545 664 aaKnown RBP5.08□□□□□ -1.6
LRRC28-218ENST00000560236 ASLP04424 464 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 SLC9A1P19634 815 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 NR4A1P22736 598 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 ADCY1Q08828 1119 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 MAN2A1Q16706 1144 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 KCNV1Q6PIU1 500 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 LRRC55Q6ZSA7 311 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 KANSL1Q7Z3B3 1105 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 C7orf31Q8N865 590 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 VOPP1Q96AW1 172 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 CLUHP3Q96NS8 147 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 FAM193BQ96PV7 902 aaPredicted RBP5.08□□□□□ -1.6
LRRC28-218ENST00000560236 UIMC1Q96RL1 719 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 OSBPL6Q9BZF3 934 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 PITHD1Q9GZP4 211 aaPredicted RBP5.08□□□□□ -1.6
LRRC28-218ENST00000560236 TNFRSF18Q9Y5U5 241 aa5.08□□□□□ -1.6
LRRC28-218ENST00000560236 MED1Q15648 1581 aaPredicted RBP5.08□□□□□ -1.6
LRRC28-218ENST00000560236 PTPRTO14522 1441 aa5.07□□□□□ -1.6
LRRC28-218ENST00000560236 FSBPO95073 299 aa5.07□□□□□ -1.6
LRRC28-218ENST00000560236 SCAF4O95104 1147 aaKnown RBP5.07□□□□□ -1.6
LRRC28-218ENST00000560236 FAM214AQ32MH5 1076 aa5.07□□□□□ -1.6
LRRC28-218ENST00000560236 PIK3R6Q5UE93 754 aa5.07□□□□□ -1.6
LRRC28-218ENST00000560236 PHYKPLQ8IUZ5 450 aa5.07□□□□□ -1.6
LRRC28-218ENST00000560236 ELF4Q99607 663 aaPredicted RBP5.07□□□□□ -1.6
LRRC28-218ENST00000560236 EPC1Q9H2F5 836 aa5.07□□□□□ -1.6
LRRC28-218ENST00000560236 RIOX1Q9H6W3 641 aa5.07□□□□□ -1.6
LRRC28-218ENST00000560236 PODXL2Q9NZ53 605 aa5.07□□□□□ -1.6
LRRC28-218ENST00000560236 B4GALT6Q9UBX8 382 aa5.07□□□□□ -1.6
LRRC28-218ENST00000560236 LTBP4Q8N2S1 1624 aa5.07□□□□□ -1.6
LRRC28-218ENST00000560236 TTC37Q6PGP7 1564 aa5.07□□□□□ -1.6
LRRC28-218ENST00000560236 POGZQ7Z3K3 1410 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 ARID4BQ4LE39 1312 aaPredicted RBP5.06□□□□□ -1.6
LRRC28-218ENST00000560236 TRIM24O15164 1050 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 HOXA3O43365 443 aaPredicted RBP5.06□□□□□ -1.6
LRRC28-218ENST00000560236 B3GALT2O43825 422 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 OPHN1O60890 802 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 PRPF6O94906 941 aaKnown RBP5.06□□□□□ -1.6
LRRC28-218ENST00000560236 GYPEP15421 78 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 ZNF460Q14592 562 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 TIGD2Q4W5G0 525 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 FNDC3BQ53EP0 1204 aaKnown RBP5.06□□□□□ -1.6
LRRC28-218ENST00000560236 PLEKHG4Q58EX7 1191 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 SOGA3Q5TF21 947 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 KIAA1841Q6NSI8 718 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 ESRP1Q6NXG1 681 aaKnown RBP5.06□□□□□ -1.6
LRRC28-218ENST00000560236 UNQ6494/PRO21346Q6UXR6 183 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 LILRB2Q8N423 598 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 CPPED1Q9BRF8 314 aaPredicted RBP5.06□□□□□ -1.6
LRRC28-218ENST00000560236 NOL10Q9BSC4 688 aaKnown RBP5.06□□□□□ -1.6
LRRC28-218ENST00000560236 MYL10Q9BUA6 226 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 POFUT1Q9H488 388 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 ING3Q9NXR8 418 aa5.06□□□□□ -1.6
LRRC28-218ENST00000560236 ZNHIT2Q9UHR6 403 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms