RNA–Protein interactions for RNA: ENST00000559245.1

CDC42BPB-205, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 2

Gene CDC42BPB, Length 738 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-205ENST00000559245 NPR3P17342 541 aa18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 PDIA3P30101 505 aaKnown RBP18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 HSPA4P34932 840 aa18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 AFF1P51825 1210 aaKnown RBP18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 PSMC5P62195 406 aa18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 C15orf39Q6ZRI6 1047 aa18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 MRPL10Q7Z7H8 261 aaKnown RBP18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 MBOAT7Q96N66 472 aa18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 FAM193BQ96PV7 902 aaPredicted RBP18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 TMEM175Q9BSA9 504 aa18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 RSAD1Q9HA92 442 aa18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 KCNK12Q9HB15 430 aa18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 DUSP12Q9UNI6 340 aa18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 FAN1Q9Y2M0 1017 aa18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 COL4A3BPQ9Y5P4 624 aa18.21■□□□□ 0.51
CDC42BPB-205ENST00000559245 LETM2Q2VYF4 491 aa18.2■□□□□ 0.5
CDC42BPB-205ENST00000559245 CCDC105Q8IYK2 499 aa18.2■□□□□ 0.5
CDC42BPB-205ENST00000559245 BLIDQ8IZY5 108 aa18.2■□□□□ 0.5
CDC42BPB-205ENST00000559245 MRPL17Q9NRX2 175 aaKnown RBP18.2■□□□□ 0.5
CDC42BPB-205ENST00000559245 KANSL3Q9P2N6 904 aa18.2■□□□□ 0.5
CDC42BPB-205ENST00000559245 FBXL21Q9UKT6 434 aa18.2■□□□□ 0.5
CDC42BPB-205ENST00000559245 DCHS1Q96JQ0 3298 aa18.2■□□□□ 0.5
CDC42BPB-205ENST00000559245 CNTNAP2Q9UHC6 1331 aa18.2■□□□□ 0.5
CDC42BPB-205ENST00000559245 DOCK6Q96HP0 2047 aa18.2■□□□□ 0.5
CDC42BPB-205ENST00000559245 ZNF292O60281 2723 aa18.2■□□□□ 0.5
CDC42BPB-205ENST00000559245 M0R2N6 131 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 C2CD2LO14523 706 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 NRP1O14786 923 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 POMCP01189 267 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 NPEPPSP55786 919 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 EVCP57679 992 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 SSRP1Q08945 709 aaKnown RBP18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 MOXD1Q6UVY6 613 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 SRGAP1Q7Z6B7 1085 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 TRIM22Q8IYM9 498 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 SIX5Q8N196 739 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 RTP3Q9BQQ7 232 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 MINDY3Q9H8M7 445 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 MAN1C1Q9NR34 630 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 IGSF9Q9P2J2 1179 aa18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 DDX25Q9UHL0 483 aaKnown RBP18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 EP300Q09472 2414 aaPredicted RBP18.19■□□□□ 0.5
CDC42BPB-205ENST00000559245 FANCMQ8IYD8 2048 aa18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 EML1O00423 815 aa18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 SOD2P04179 222 aa18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 URODP06132 367 aa18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 SRGAP2CP0DJJ0 459 aa18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 HOXA11P31270 313 aaPredicted RBP18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 QARSP47897 775 aaKnown RBP18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 AK2P54819 239 aa18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 ANGPT1Q15389 498 aa18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 UBXN11Q5T124 520 aa18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 ADSSL1Q8N142 457 aa18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 ZNF579Q8NAF0 562 aaKnown RBP18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 DTWD2Q8NBA8 298 aa18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 DAGLBQ8NCG7 672 aa18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 CMASQ8NFW8 434 aaPredicted RBP18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 PRPF31Q8WWY3 499 aaKnown RBP18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 SLC7A3Q8WY07 619 aa18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 CEP170P1Q96L14 293 aa18.18■□□□□ 0.5
CDC42BPB-205ENST00000559245 NARSO43776 548 aaKnown RBP18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 SLC37A4O43826 429 aa18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 DKC1O60832 514 aaKnown RBP eCLIP18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 N4BP1O75113 896 aaKnown RBP18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 DEXIO95424 95 aa18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 PSMA5P28066 241 aa18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 LAMTOR4Q0VGL1 99 aa18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 PPP2R5CQ13362 524 aa18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 CENPQQ7L2Z9 268 aaPredicted RBP18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 EXOC8Q8IYI6 725 aa18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 PSPC1Q8WXF1 523 aaKnown RBP18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 TMEM143Q96AN5 459 aa18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 RPS6KC1Q96S38 1066 aa18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 HERC2P3Q9BVR0 1158 aa18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 DHX33Q9H6R0 707 aaKnown RBP18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 MARCH5Q9NX47 278 aa18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 SSX2IPQ9Y2D8 614 aa18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 PRG3Q9Y2Y8 225 aaPredicted RBP18.17■□□□□ 0.5
CDC42BPB-205ENST00000559245 MYH15Q9Y2K3 1946 aa18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 CCDC195A0A1B0GUA6 201 aa18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 ADH1AP07327 375 aa18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 NCLP19338 710 aaKnown RBP18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 GBP2P32456 591 aaPredicted RBP18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 OR1G1P47890 313 aa18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 NONOQ15233 471 aaKnown RBP eCLIP18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 NPY5RQ15761 445 aa18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 INF2Q27J81 1249 aa18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 TAS1R1Q7RTX1 841 aa18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 COLGALT2Q8IYK4 626 aa18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 SMG8Q8ND04 991 aaKnown RBP18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 CNNM3Q8NE01 707 aa18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 RSAD2Q8WXG1 361 aa18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 SLKQ9H2G2 1235 aaPredicted RBP18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 WDR6Q9NNW5 1121 aaKnown RBP18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 BMP2KQ9NSY1 1161 aaPredicted RBP18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 WRAP73Q9P2S5 460 aaPredicted RBP18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 VAV3Q9UKW4 847 aa18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 PPME1Q9Y570 386 aa18.16■□□□□ 0.5
CDC42BPB-205ENST00000559245 MIA3Q5JRA6 1907 aa18.15■□□□□ 0.5
CDC42BPB-205ENST00000559245 INPPL1O15357 1258 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms