RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 TSPYL2Q9H2G4 693 aaPredicted RBP12.02□□□□□ -0.49
TPM1-217ENST00000559108 PDZD7Q9H5P4 517 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 MAGEF1Q9HAY2 307 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 PARVGQ9HBI0 331 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 KMT5AQ9NQR1 393 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 PANK4Q9NVE7 773 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 DACT1Q9NYF0 836 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 PHLPP2Q6ZVD8 1323 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 CNTNAP2Q9UHC6 1331 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 RALGAPA2Q2PPJ7 1873 aa12.02□□□□□ -0.49
TPM1-217ENST00000559108 DENND3A2RUS2 1198 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 K7ENM7 598 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 GTPBP6O43824 516 aaPredicted RBP12.01□□□□□ -0.49
TPM1-217ENST00000559108 TRAK2O60296 914 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 TBCAO75347 108 aaKnown RBP12.01□□□□□ -0.49
TPM1-217ENST00000559108 PRKCBP05771 671 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 MYOGP15173 224 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 SFPQP23246 707 aaKnown RBP eCLIP12.01□□□□□ -0.49
TPM1-217ENST00000559108 PBX2P40425 430 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 RABGGTBP53611 331 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 FAM187BQ17R55 369 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 UNC13DQ70J99 1090 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 HAUS6Q7Z4H7 955 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 RPUSD2Q8IZ73 545 aaKnown RBP12.01□□□□□ -0.49
TPM1-217ENST00000559108 TDHQ8IZJ6 230 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 KIAA0895Q8NCT3 520 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 CNNM3Q8NE01 707 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 APBB2Q92870 758 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 KCNN1Q92952 543 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 ZBTB45Q96K62 511 aaPredicted RBP12.01□□□□□ -0.49
TPM1-217ENST00000559108 IFT74Q96LB3 600 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 TARS2Q9BW92 718 aaKnown RBP12.01□□□□□ -0.49
TPM1-217ENST00000559108 RNF39Q9H2S5 420 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 C17orf75Q9HAS0 396 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 RC3H2Q9HBD1 1191 aaKnown RBP12.01□□□□□ -0.49
TPM1-217ENST00000559108 RGS18Q9NS28 235 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 HCSTQ9UBK5 93 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 USP25Q9UHP3 1055 aa12.01□□□□□ -0.49
TPM1-217ENST00000559108 PIN4Q9Y237 131 aaKnown RBP12.01□□□□□ -0.49
TPM1-217ENST00000559108 COL4A4P53420 1690 aaPredicted RBP12□□□□□ -0.49
TPM1-217ENST00000559108 TDRD15B5MCY1 1934 aaKnown RBP12□□□□□ -0.49
TPM1-217ENST00000559108 ABHD14A-ACY1A0A1B0GW23 586 aa12□□□□□ -0.49
TPM1-217ENST00000559108 LCHNA4D1U4 455 aa12□□□□□ -0.49
TPM1-217ENST00000559108 GOLGA6L4A6NEF3 574 aa12□□□□□ -0.49
TPM1-217ENST00000559108 ZBBXA8MT70 800 aa12□□□□□ -0.49
TPM1-217ENST00000559108 ACKR2O00590 384 aa12□□□□□ -0.49
TPM1-217ENST00000559108 GPR182O15218 404 aa12□□□□□ -0.49
TPM1-217ENST00000559108 BAIAP3O94812 1187 aa12□□□□□ -0.49
TPM1-217ENST00000559108 IBSPP21815 317 aaPredicted RBP12□□□□□ -0.49
TPM1-217ENST00000559108 AFF1P51825 1210 aaKnown RBP12□□□□□ -0.49
TPM1-217ENST00000559108 CDC42EP1Q00587 391 aa12□□□□□ -0.49
TPM1-217ENST00000559108 IKBKEQ14164 716 aa12□□□□□ -0.49
TPM1-217ENST00000559108 POSTNQ15063 836 aa12□□□□□ -0.49
TPM1-217ENST00000559108 PPP2R5AQ15172 486 aa12□□□□□ -0.49
TPM1-217ENST00000559108 KMT5BQ4FZB7 885 aa12□□□□□ -0.49
TPM1-217ENST00000559108 FAM117BQ6P1L5 589 aa12□□□□□ -0.49
TPM1-217ENST00000559108 EPM2AIP1Q7L775 607 aaPredicted RBP12□□□□□ -0.49
TPM1-217ENST00000559108 ZNF720Q7Z2F6 126 aa12□□□□□ -0.49
TPM1-217ENST00000559108 ZNF598Q86UK7 904 aaKnown RBP12□□□□□ -0.49
TPM1-217ENST00000559108 CEP57L1Q8IYX8 460 aa12□□□□□ -0.49
TPM1-217ENST00000559108 CEP120Q8N960 986 aa12□□□□□ -0.49
TPM1-217ENST00000559108 SMG8Q8ND04 991 aaKnown RBP12□□□□□ -0.49
TPM1-217ENST00000559108 LPPQ93052 612 aa12□□□□□ -0.49
TPM1-217ENST00000559108 TMEM134Q9H6X4 195 aa12□□□□□ -0.49
TPM1-217ENST00000559108 PTPRHQ9HD43 1115 aa12□□□□□ -0.49
TPM1-217ENST00000559108 OLFML3Q9NRN5 406 aa12□□□□□ -0.49
TPM1-217ENST00000559108 YBX2Q9Y2T7 364 aaKnown RBP12□□□□□ -0.49
TPM1-217ENST00000559108 HES2Q9Y543 173 aa12□□□□□ -0.49
TPM1-217ENST00000559108 LAMA2P24043 3122 aaKnown RBP12□□□□□ -0.49
TPM1-217ENST00000559108 CITO14578 2027 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 A0A1B0GUA9 196 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 ANKRD63C9JTQ0 380 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 B4GALT3O60512 393 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 PRPF6O94906 941 aaKnown RBP11.99□□□□□ -0.49
TPM1-217ENST00000559108 RPN1P04843 607 aaKnown RBP11.99□□□□□ -0.49
TPM1-217ENST00000559108 FGFR1P11362 822 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 GAP43P17677 238 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 BMP6P22004 513 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 PROZP22891 400 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 MCM4P33991 863 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 FAM189BP81408 668 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 GTF2BQ00403 316 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 STK4Q13043 487 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 CSPP1Q1MSJ5 1256 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 HERC4Q5GLZ8 1057 aaPredicted RBP11.99□□□□□ -0.49
TPM1-217ENST00000559108 ZBTB41Q5SVQ8 909 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 HERC6Q8IVU3 1022 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 ZBTB8OSQ8IWT0 167 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 FAM178BQ8IXR5 827 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 TMEM192Q8IY95 271 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 SMYD4Q8IYR2 804 aaPredicted RBP11.99□□□□□ -0.49
TPM1-217ENST00000559108 ZNF710Q8N1W2 664 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 TMEM130Q8N3G9 435 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 ZSWIM2Q8NEG5 633 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 SPATA20Q8TB22 786 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 TIGD1Q96MW7 591 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 GBP4Q96PP9 640 aa11.99□□□□□ -0.49
TPM1-217ENST00000559108 ACO2Q99798 780 aaKnown RBP11.99□□□□□ -0.49
TPM1-217ENST00000559108 PYM1Q9BRP8 204 aaKnown RBP11.99□□□□□ -0.49
TPM1-217ENST00000559108 C2orf40Q9H1Z8 148 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms