RNA–Protein interactions for RNA: ENST00000558970.2

GABPB1-208, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5

Gene GABPB1, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-208ENST00000558970 SMC2O95347 1197 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 CXCL10P02778 98 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 MAPTP10636 758 aaKnown RBP13.67□□□□□ -0.22
GABPB1-208ENST00000558970 HARSP12081 509 aaKnown RBP13.67□□□□□ -0.22
GABPB1-208ENST00000558970 BMP8BP34820 402 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 MATR3P43243 847 aaKnown RBP eCLIP13.67□□□□□ -0.22
GABPB1-208ENST00000558970 KCNA1Q09470 495 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 PRPF4BQ13523 1007 aaKnown RBP13.67□□□□□ -0.22
GABPB1-208ENST00000558970 NFKBIBQ15653 356 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 L1TD1Q5T7N2 865 aaKnown RBP13.67□□□□□ -0.22
GABPB1-208ENST00000558970 TWF2Q6IBS0 349 aaKnown RBP13.67□□□□□ -0.22
GABPB1-208ENST00000558970 CAVIN1Q6NZI2 390 aaKnown RBP13.67□□□□□ -0.22
GABPB1-208ENST00000558970 CNKSR3Q6P9H4 555 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 C16orf59Q7L2K0 433 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 NELFCDQ8IXH7 590 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 SMYD4Q8IYR2 804 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-208ENST00000558970 RPUSD2Q8IZ73 545 aaKnown RBP13.67□□□□□ -0.22
GABPB1-208ENST00000558970 SLC17A8Q8NDX2 589 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 FIZ1Q96SL8 496 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 UBE2OQ9C0C9 1292 aaKnown RBP13.67□□□□□ -0.22
GABPB1-208ENST00000558970 CCDC113Q9H0I3 377 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 TMX1Q9H3N1 280 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 PRMT7Q9NVM4 692 aaPredicted RBP13.67□□□□□ -0.22
GABPB1-208ENST00000558970 SEL1LQ9UBV2 794 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 GDAQ9Y2T3 454 aa13.67□□□□□ -0.22
GABPB1-208ENST00000558970 PVALEFA0A1B0GWK0 134 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 TULP1O00294 542 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-208ENST00000558970 PARNO95453 639 aaKnown RBP13.66□□□□□ -0.22
GABPB1-208ENST00000558970 FGBP02675 491 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 MYL1P05976 194 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 ARF4P18085 180 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-208ENST00000558970 EFNA5P52803 228 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 STK4Q13043 487 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 C9orf50Q5SZB4 431 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 CNNM4Q6P4Q7 775 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 ZNF720Q7Z2F6 126 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 TMCO2Q7Z6W1 182 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-208ENST00000558970 ZBTB33Q86T24 672 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 IFNLR1Q8IU57 520 aaPredicted RBP13.66□□□□□ -0.22
GABPB1-208ENST00000558970 ZNF710Q8N1W2 664 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 USP38Q8NB14 1042 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 RNF169Q8NCN4 708 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 LINC01599Q8WXQ3 324 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 ADAM2Q99965 735 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 TARS2Q9BW92 718 aaKnown RBP13.66□□□□□ -0.22
GABPB1-208ENST00000558970 NFKBIZQ9BYH8 718 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 OLFML3Q9NRN5 406 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 AGPAT5Q9NUQ2 364 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 ANKFY1Q9P2R3 1169 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 TBX20Q9UMR3 447 aa13.66□□□□□ -0.22
GABPB1-208ENST00000558970 TISP43B9A030 160 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 H0YCG3 227 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 DLL1O00548 723 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 HNRNPDLO14979 420 aaKnown RBP13.65□□□□□ -0.22
GABPB1-208ENST00000558970 UPP2O95045 317 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 NPTXRO95502 500 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 ACTN1P12814 892 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 ZSCAN20P17040 1043 aaPredicted RBP13.65□□□□□ -0.22
GABPB1-208ENST00000558970 POU5F1BQ06416 359 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 EHHADHQ08426 723 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 IKBKEQ14164 716 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 AMHR2Q16671 573 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 TMEM240Q5SV17 173 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 NT5DC1Q5TFE4 455 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 FAM117BQ6P1L5 589 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 PSRC1Q6PGN9 363 aaPredicted RBP13.65□□□□□ -0.22
GABPB1-208ENST00000558970 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.65□□□□□ -0.222e-8■■□□□ 11.7
GABPB1-208ENST00000558970 SYCP3Q8IZU3 236 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 KIAA0895Q8NCT3 520 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 NOC3LQ8WTT2 800 aaKnown RBP13.65□□□□□ -0.22
GABPB1-208ENST00000558970 APBB2Q92870 758 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 GDF15Q99988 308 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 NTPCRQ9BSD7 190 aaKnown RBP13.65□□□□□ -0.22
GABPB1-208ENST00000558970 APOL6Q9BWW8 343 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 FZD8Q9H461 694 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 TMEM134Q9H6X4 195 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 CXXC1Q9P0U4 656 aaPredicted RBP13.65□□□□□ -0.22
GABPB1-208ENST00000558970 TMEM63CQ9P1W3 806 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 MAN1B1Q9UKM7 699 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 SQORQ9Y6N5 450 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 TRIP11Q15643 1979 aa13.65□□□□□ -0.22
GABPB1-208ENST00000558970 CNTNAP2Q9UHC6 1331 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 TDRD15B5MCY1 1934 aaKnown RBP13.64□□□□□ -0.23
GABPB1-208ENST00000558970 COL6A3P12111 3177 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 ACKR2O00590 384 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 RHOBTB3O94955 611 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 PFKMP08237 780 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 LIG4P49917 911 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 DEFB103AP81534 67 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 GTF2BQ00403 316 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 NCBP1Q09161 790 aaKnown RBP13.64□□□□□ -0.23
GABPB1-208ENST00000558970 SHHQ15465 462 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 ATF7IP2Q5U623 682 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 EEF1DP3Q658K8 133 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 NOTUMQ6P988 496 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 RTN4RL1Q86UN2 441 aaPredicted RBP13.64□□□□□ -0.23
GABPB1-208ENST00000558970 MYOCDQ8IZQ8 938 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 ZBTB45Q96K62 511 aaPredicted RBP13.64□□□□□ -0.23
GABPB1-208ENST00000558970 TCHPQ9BT92 498 aa13.64□□□□□ -0.23
GABPB1-208ENST00000558970 EIF2AQ9BY44 585 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms