RNA–Protein interactions for RNA: ENST00000558561.1

SPG11-211, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-211ENST00000558561 NOGQ13253 232 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 KIR3DS1Q14943 382 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 SLC14A2Q15849 920 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 SLC9C2Q5TAH2 1124 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 FOXB2Q5VYV0 432 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 SPTY2D1Q68D10 685 aaPredicted RBP5.12□□□□□ -1.59
SPG11-211ENST00000558561 DENND5AQ6IQ26 1287 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 CPNE8Q86YQ8 564 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 SPPL2CQ8IUH8 684 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 TEX11Q8IYF3 940 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 LRRC47Q8N1G4 583 aaKnown RBP5.12□□□□□ -1.59
SPG11-211ENST00000558561 CLASRPQ8N2M8 674 aaKnown RBP5.12□□□□□ -1.59
SPG11-211ENST00000558561 LCORLQ8N3X6 602 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 ANKS4BQ8N8V4 417 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.12□□□□□ -1.59
SPG11-211ENST00000558561 TMEM145Q8NBT3 493 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 FRS2Q8WU20 508 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 SDR42E1Q8WUS8 393 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 DYNLL2Q96FJ2 89 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 MRFAP1L1Q96HT8 127 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 JMJD8Q96S16 334 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 WRNIP1Q96S55 665 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 RIOK1Q9BRS2 568 aaKnown RBP5.12□□□□□ -1.59
SPG11-211ENST00000558561 IER2Q9BTL4 223 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 LRRCC1Q9C099 1032 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 PUS7LQ9H0K6 701 aaKnown RBP5.12□□□□□ -1.59
SPG11-211ENST00000558561 ARMT1Q9H993 441 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 CWC22Q9HCG8 908 aaKnown RBP5.12□□□□□ -1.59
SPG11-211ENST00000558561 CLEC1BQ9P126 229 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 MYH1P12882 1939 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 BAZ2AQ9UIF9 1905 aaKnown RBP5.12□□□□□ -1.59
SPG11-211ENST00000558561 SALL3Q9BXA9 1300 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 ZNF532Q9HCE3 1301 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 ATRNL1Q5VV63 1379 aa5.12□□□□□ -1.59
SPG11-211ENST00000558561 PAPPA2Q9BXP8 1791 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 PHIPQ8WWQ0 1821 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 BTBD19C9JJ37 291 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 M0R2C6 588 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 DLX3O60479 287 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 HMMRO75330 724 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 ENTPD3O75355 529 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 SCG5P05408 212 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 LDHCP07864 332 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 RAC2P15153 192 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 TAL1P17542 331 aaPredicted RBP5.11□□□□□ -1.59
SPG11-211ENST00000558561 ITGB5P18084 799 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 NF2P35240 595 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 GFRA1P56159 465 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 FKBP1BP68106 108 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 CHRNEQ04844 493 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 FKBP1CQ5VVH2 108 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 HLA-DQA1Q5Y7H0 255 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 CCDC129Q6ZRS4 1044 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 SLCO6A1Q86UG4 719 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 KSR1Q8IVT5 923 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 ANKRD13AQ8IZ07 590 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 SLC44A5Q8NCS7 719 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 KREMEN2Q8NCW0 462 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 NPLOC4Q8TAT6 608 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 ABHD4Q8TB40 342 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 OSBP2Q969R2 916 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 KIRREL1Q96J84 757 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 CCDC140Q96MF4 163 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 PLCD4Q9BRC7 762 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 AARSD1Q9BTE6 412 aaKnown RBP5.11□□□□□ -1.59
SPG11-211ENST00000558561 ZNF341Q9BYN7 854 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 ARHGAP39Q9C0H5 1083 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 OSBPL5Q9H0X9 879 aaPredicted RBP5.11□□□□□ -1.59
SPG11-211ENST00000558561 PAG1Q9NWQ8 432 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 TMEFF2Q9UIK5 374 aaPredicted RBP5.11□□□□□ -1.59
SPG11-211ENST00000558561 ZHX2Q9Y6X8 837 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 PDS5AQ29RF7 1337 aaKnown RBP5.11□□□□□ -1.59
SPG11-211ENST00000558561 RFX7Q2KHR2 1363 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 DOCK2Q92608 1830 aa5.11□□□□□ -1.59
SPG11-211ENST00000558561 TRAV20A0A0B4J274 112 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 CCL15-CCL14A0A0B4J2E2 113 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 NPHP3-ACAD11A0A0J9YXS1 232 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 A0A1W2PQ45 241 aaPredicted RBP5.1□□□□□ -1.59
SPG11-211ENST00000558561 A0A1W2PQY0 241 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 FOXP2O15409 715 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 NRDCO43847 1150 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 CYP2C8P10632 490 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 PABPC1P11940 636 aaKnown RBP5.1□□□□□ -1.59
SPG11-211ENST00000558561 FLT1P17948 1338 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 PAMP19021 973 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 GUCY1A2P33402 732 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 ADD2P35612 726 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 SPP2Q13103 211 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 CRHR2Q13324 411 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 LAPTM5Q13571 262 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 NR0B2Q15466 257 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 CCL15Q16663 113 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 HSF5Q4G112 596 aaPredicted RBP5.1□□□□□ -1.59
SPG11-211ENST00000558561 FAM209AQ5JX71 171 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 KIAA1755Q5JYT7 1200 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 MBLAC2Q68D91 279 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 NSMFQ6X4W1 530 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 JAMLQ86YT9 394 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 ERC1Q8IUD2 1116 aa5.1□□□□□ -1.59
SPG11-211ENST00000558561 SIAH1Q8IUQ4 282 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms