RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 CAVIN1Q6NZI2 390 aaKnown RBP16.81■□□□□ 0.28
NEDD1-213ENST00000557644 CDR2LQ86X02 465 aaPredicted RBP16.81■□□□□ 0.28
NEDD1-213ENST00000557644 SMYD4Q8IYR2 804 aaPredicted RBP16.81■□□□□ 0.28
NEDD1-213ENST00000557644 CPB2Q96IY4 423 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 GSDMAQ96QA5 445 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 STRA6Q9BX79 667 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 TMEM134Q9H6X4 195 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 KIAA1468Q9P260 1216 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 KCNG1Q9UIX4 513 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 TBX20Q9UMR3 447 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 GDAQ9Y2T3 454 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 PHLPP2Q6ZVD8 1323 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 MGEA5O60502 916 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 ERLIN2O94905 339 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 HOXA11P31270 313 aaPredicted RBP16.81■□□□□ 0.28
NEDD1-213ENST00000557644 GTF2BQ00403 316 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 KCNB1Q14721 858 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 NT5DC1Q5TFE4 455 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 IL23AQ9NPF7 189 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 MAN1B1Q9UKM7 699 aa16.81■□□□□ 0.28
NEDD1-213ENST00000557644 PRPF6O94906 941 aaKnown RBP16.8■□□□□ 0.28
NEDD1-213ENST00000557644 ARF4P18085 180 aaPredicted RBP16.8■□□□□ 0.28
NEDD1-213ENST00000557644 PPIGQ13427 754 aaKnown RBP eCLIP16.8■□□□□ 0.28
NEDD1-213ENST00000557644 KLHL40Q2TBA0 621 aa16.8■□□□□ 0.28
NEDD1-213ENST00000557644 ST6GALNAC4Q9H4F1 302 aa16.8■□□□□ 0.28
NEDD1-213ENST00000557644 AGPAT5Q9NUQ2 364 aa16.8■□□□□ 0.28
NEDD1-213ENST00000557644 PRMT7Q9NVM4 692 aaPredicted RBP16.8■□□□□ 0.28
NEDD1-213ENST00000557644 PIN4Q9Y237 131 aaKnown RBP16.8■□□□□ 0.28
NEDD1-213ENST00000557644 ACKR2O00590 384 aa16.8■□□□□ 0.28
NEDD1-213ENST00000557644 PRPF4BQ13523 1007 aaKnown RBP16.8■□□□□ 0.28
NEDD1-213ENST00000557644 FAM187BQ17R55 369 aa16.8■□□□□ 0.28
NEDD1-213ENST00000557644 PPP4R3CPQ6ZMV5 832 aa16.8■□□□□ 0.28
NEDD1-213ENST00000557644 SCFD1Q8WVM8 642 aa16.8■□□□□ 0.28
NEDD1-213ENST00000557644 SEPT8Q92599 483 aa16.8■□□□□ 0.28
NEDD1-213ENST00000557644 MAPK8IP1Q9UQF2 711 aa16.8■□□□□ 0.28
NEDD1-213ENST00000557644 PTMSP20962 102 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 BMP6P22004 513 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 HOXD13P35453 343 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 STRN3Q13033 797 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 ZNF365Q70YC5 407 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 EPM2AIP1Q7L775 607 aaPredicted RBP16.79■□□□□ 0.28
NEDD1-213ENST00000557644 OTOP2Q7RTS6 562 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 RTN4RL1Q86UN2 441 aaPredicted RBP16.79■□□□□ 0.28
NEDD1-213ENST00000557644 RPUSD2Q8IZ73 545 aaKnown RBP16.79■□□□□ 0.28
NEDD1-213ENST00000557644 CCDC47Q96A33 483 aaKnown RBP16.79■□□□□ 0.28
NEDD1-213ENST00000557644 TARS2Q9BW92 718 aaKnown RBP16.79■□□□□ 0.28
NEDD1-213ENST00000557644 H0YCG3 227 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 PSMD2Q13200 908 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 CCDC183Q5T5S1 534 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 CNKSR3Q6P9H4 555 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 SLC17A8Q8NDX2 589 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 LINC01599Q8WXQ3 324 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 PRIMPOLQ96LW4 560 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.79■□□□□ 0.28
NEDD1-213ENST00000557644 RMND1Q9NWS8 449 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 PCDHB13Q9Y5F0 798 aa16.79■□□□□ 0.28
NEDD1-213ENST00000557644 CNTNAP2Q9UHC6 1331 aa16.78■□□□□ 0.28
NEDD1-213ENST00000557644 TISP43B9A030 160 aa16.78■□□□□ 0.28
NEDD1-213ENST00000557644 TMEM240Q5SV17 173 aa16.78■□□□□ 0.28
NEDD1-213ENST00000557644 MAP4K3Q8IVH8 894 aa16.78■□□□□ 0.28
NEDD1-213ENST00000557644 NELFCDQ8IXH7 590 aa16.78■□□□□ 0.28
NEDD1-213ENST00000557644 KCNN1Q92952 543 aa16.78■□□□□ 0.28
NEDD1-213ENST00000557644 ADAM2Q99965 735 aa16.78■□□□□ 0.28
NEDD1-213ENST00000557644 DSC3Q14574 896 aa16.78■□□□□ 0.28
NEDD1-213ENST00000557644 TMEM132AQ24JP5 1023 aa16.78■□□□□ 0.28
NEDD1-213ENST00000557644 L1TD1Q5T7N2 865 aaKnown RBP16.78■□□□□ 0.28
NEDD1-213ENST00000557644 BICD1Q96G01 975 aa16.78■□□□□ 0.28
NEDD1-213ENST00000557644 ACO2Q99798 780 aaKnown RBP16.78■□□□□ 0.28
NEDD1-213ENST00000557644 MRPL4Q9BYD3 311 aaKnown RBP16.78■□□□□ 0.28
NEDD1-213ENST00000557644 PFKMP08237 780 aa16.77■□□□□ 0.28
NEDD1-213ENST00000557644 IBSPP21815 317 aaPredicted RBP16.77■□□□□ 0.28
NEDD1-213ENST00000557644 MORC3Q14149 939 aa16.77■□□□□ 0.28
NEDD1-213ENST00000557644 PCBP1Q15365 356 aaKnown RBP eCLIP16.77■□□□□ 0.28
NEDD1-213ENST00000557644 ZNF658Q5TYW1 1059 aaPredicted RBP16.77■□□□□ 0.28
NEDD1-213ENST00000557644 EEF1DP3Q658K8 133 aa16.77■□□□□ 0.28
NEDD1-213ENST00000557644 SLC39A4Q6P5W5 647 aa16.77■□□□□ 0.28
NEDD1-213ENST00000557644 ZNF507Q8TCN5 953 aa16.77■□□□□ 0.28
NEDD1-213ENST00000557644 APBB2Q92870 758 aa16.77■□□□□ 0.28
NEDD1-213ENST00000557644 ZBTB45Q96K62 511 aaPredicted RBP16.77■□□□□ 0.28
NEDD1-213ENST00000557644 PDZD7Q9H5P4 517 aa16.77■□□□□ 0.28
NEDD1-213ENST00000557644 A0A1B0GUA9 196 aa16.77■□□□□ 0.27
NEDD1-213ENST00000557644 HNRNPDLO14979 420 aaKnown RBP16.77■□□□□ 0.27
NEDD1-213ENST00000557644 EIF3DO15371 548 aaKnown RBP eCLIP16.77■□□□□ 0.27
NEDD1-213ENST00000557644 ATF7IP2Q5U623 682 aa16.77■□□□□ 0.27
NEDD1-213ENST00000557644 TWF2Q6IBS0 349 aaKnown RBP16.77■□□□□ 0.27
NEDD1-213ENST00000557644 NOTUMQ6P988 496 aa16.77■□□□□ 0.27
NEDD1-213ENST00000557644 RBM43Q6ZSC3 357 aaKnown RBP16.77■□□□□ 0.27
NEDD1-213ENST00000557644 ACCSQ96QU6 501 aa16.77■□□□□ 0.27
NEDD1-213ENST00000557644 EIF2AQ9BY44 585 aaKnown RBP16.77■□□□□ 0.27
NEDD1-213ENST00000557644 ZMYM2Q9UBW7 1377 aa16.76■□□□□ 0.27
NEDD1-213ENST00000557644 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.76■□□□□ 0.27
NEDD1-213ENST00000557644 ANKRD63C9JTQ0 380 aa16.76■□□□□ 0.27
NEDD1-213ENST00000557644 FGBP02675 491 aa16.76■□□□□ 0.27
NEDD1-213ENST00000557644 ZSCAN20P17040 1043 aaPredicted RBP16.76■□□□□ 0.27
NEDD1-213ENST00000557644 NCBP1Q09161 790 aaKnown RBP16.76■□□□□ 0.27
NEDD1-213ENST00000557644 ALCAMQ13740 583 aa16.76■□□□□ 0.27
NEDD1-213ENST00000557644 IKBKEQ14164 716 aa16.76■□□□□ 0.27
NEDD1-213ENST00000557644 C9orf50Q5SZB4 431 aa16.76■□□□□ 0.27
NEDD1-213ENST00000557644 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.76■□□□□ 0.272e-6■■■■□ 20.9
NEDD1-213ENST00000557644 GDF15Q99988 308 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms