RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 VAV3Q9UKW4 847 aa15.78■□□□□ 0.12
SLIRP-210ENST00000557431 IRAK3Q9Y616 596 aa15.78■□□□□ 0.12
SLIRP-210ENST00000557431 CFAP54Q96N23 3096 aa15.78■□□□□ 0.12
SLIRP-210ENST00000557431 RIF1Q5UIP0 2472 aaKnown RBP15.77■□□□□ 0.12
SLIRP-210ENST00000557431 FAM205CA6NFA0 338 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 NRP1O14786 923 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 PI15O43692 258 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 NARSO43776 548 aaKnown RBP15.77■□□□□ 0.12
SLIRP-210ENST00000557431 DEXIO95424 95 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 KLRC2P26717 231 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 PSMA5P28066 241 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 RAB27AP51159 221 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 CLCN4P51793 760 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 POLGP54098 1239 aaPredicted RBP15.77■□□□□ 0.12
SLIRP-210ENST00000557431 EVCP57679 992 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 ZDHHC14Q8IZN3 488 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 DAGLBQ8NCG7 672 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 ST13P5Q8NFI4 369 aaPredicted RBP15.77■□□□□ 0.12
SLIRP-210ENST00000557431 URGCPQ8TCY9 931 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 PRPF31Q8WWY3 499 aaKnown RBP15.77■□□□□ 0.12
SLIRP-210ENST00000557431 RSAD2Q8WXG1 361 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 CPB2Q96IY4 423 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 CEP170P1Q96L14 293 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 SNX27Q96L92 541 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 INO80BQ9C086 356 aaPredicted RBP15.77■□□□□ 0.12
SLIRP-210ENST00000557431 MARCH5Q9NX47 278 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 RGL1Q9NZL6 768 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 HES2Q9Y543 173 aa15.77■□□□□ 0.12
SLIRP-210ENST00000557431 DMDP11532 3685 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 CPLX1O14810 134 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 N4BP1O75113 896 aaKnown RBP15.76■□□□□ 0.11
SLIRP-210ENST00000557431 ZNF623O75123 536 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 HOXA11P31270 313 aaPredicted RBP15.76■□□□□ 0.11
SLIRP-210ENST00000557431 CYP4A11Q02928 519 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 EARS2Q5JPH6 523 aaKnown RBP15.76■□□□□ 0.11
SLIRP-210ENST00000557431 ASTLQ6HA08 431 aaPredicted RBP15.76■□□□□ 0.11
SLIRP-210ENST00000557431 NCAPH2Q6IBW4 605 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 CCDC149Q6ZUS6 474 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 FRMD5Q7Z6J6 570 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 GPR149Q86SP6 731 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 POTEDQ86YR6 584 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 SMG8Q8ND04 991 aaKnown RBP15.76■□□□□ 0.11
SLIRP-210ENST00000557431 OXER1Q8TDS5 423 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 DYDC2Q96IM9 177 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 B3GALT6Q96L58 329 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 APOL6Q9BWW8 343 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 EIF2AQ9BY44 585 aaKnown RBP15.76■□□□□ 0.11
SLIRP-210ENST00000557431 RNF39Q9H2S5 420 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 SFXN1Q9H9B4 322 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 MAN1C1Q9NR34 630 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 MIOSQ9NXC5 875 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 FAN1Q9Y2M0 1017 aa15.76■□□□□ 0.11
SLIRP-210ENST00000557431 NOTCH4Q99466 2003 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 SPTBN4Q9H254 2564 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 LILRB3O75022 631 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 RFPL2O75678 378 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 SPATA31D3P0C874 917 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 SKIP12755 728 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 OR1G1P47890 313 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 QARSP47897 775 aaKnown RBP15.75■□□□□ 0.11
SLIRP-210ENST00000557431 AK2P54819 239 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 LAMTOR4Q0VGL1 99 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 PPP2R5CQ13362 524 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 CTTNQ14247 550 aaKnown RBP15.75■□□□□ 0.11
SLIRP-210ENST00000557431 EMC2Q15006 297 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 SPATA31D4Q6ZUB0 917 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 CDR2LQ86X02 465 aaPredicted RBP15.75■□□□□ 0.11
SLIRP-210ENST00000557431 GLYCTKQ8IVS8 523 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 RNF149Q8NC42 400 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 RABGGTAQ92696 567 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 PGBD4Q96DM1 585 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 FAM193BQ96PV7 902 aaPredicted RBP15.75■□□□□ 0.11
SLIRP-210ENST00000557431 LXNQ9BS40 222 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 C22orf23Q9BZE7 217 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 DHX33Q9H6R0 707 aaKnown RBP15.75■□□□□ 0.11
SLIRP-210ENST00000557431 ZSWIM6Q9HCJ5 1215 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 KCNMB3Q9NPA1 279 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 CACNG4Q9UBN1 327 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 CACNA1IQ9P0X4 2223 aa15.75■□□□□ 0.11
SLIRP-210ENST00000557431 A0A087WWV3 80 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 PRR23AA6NEV1 266 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 CCNT1O60563 726 aaKnown RBP15.74■□□□□ 0.11
SLIRP-210ENST00000557431 NPR3P17342 541 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 MLH1P40692 756 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 CDC42EP1Q00587 391 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 GIT2Q14161 759 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 XKR9Q5GH70 373 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 MOXD1Q6UVY6 613 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 PIK3AP1Q6ZUJ8 805 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 KRT25Q7Z3Z0 450 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 MRPL10Q7Z7H8 261 aaKnown RBP15.74■□□□□ 0.11
SLIRP-210ENST00000557431 PLCD3Q8N3E9 789 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 PSPC1Q8WXF1 523 aaKnown RBP15.74■□□□□ 0.11
SLIRP-210ENST00000557431 SLC7A3Q8WY07 619 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 HAS1Q92839 578 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 ZFP42Q96MM3 310 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 GAD1Q99259 594 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 EMILIN2Q9BXX0 1053 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 XPNPEP1Q9NQW7 623 aa15.74■□□□□ 0.11
SLIRP-210ENST00000557431 USTQ9Y2C2 406 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms